RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 PRSS22Q9GZN4 317 aa6.73□□□□□ -1.33
TDP1-203ENST00000393454 GAR1Q9NY12 217 aaKnown RBP6.73□□□□□ -1.33
TDP1-203ENST00000393454 SONP18583 2426 aaKnown RBP6.73□□□□□ -1.33
TDP1-203ENST00000393454 MYO9AB2RTY4 2548 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 WI2-2373I1.2A0A1W2PRP0 233 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 F6UZH7 168 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 HNF1AP20823 631 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 PPIFP30405 207 aaKnown RBP6.72□□□□□ -1.33
TDP1-203ENST00000393454 ADMP35318 185 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 KRTAP1-1Q07627 177 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 AWAT1Q58HT5 328 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 S100A7AQ86SG5 101 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 ZNF329Q86UD4 541 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 BLNKQ8WV28 456 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 CCDC140Q96MF4 163 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 SMIM7Q9BQ49 75 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 NPFFR1Q9GZQ6 430 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 PRDM13Q9H4Q3 707 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 RPS10P5Q9NQ39 176 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 MRPL27Q9P0M9 148 aaKnown RBP6.72□□□□□ -1.33
TDP1-203ENST00000393454 ZNF469Q96JG9 3925 aaPredicted RBP6.72□□□□□ -1.33
TDP1-203ENST00000393454 NOTCH2Q04721 2471 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 TGOLN2O43493 480 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 AKR1C3P42330 323 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 USF2Q15853 346 aaPredicted RBP6.72□□□□□ -1.33
TDP1-203ENST00000393454 LCNL1Q6ZST4 164 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 KLK15Q9H2R5 256 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 PARLQ9H300 379 aa6.72□□□□□ -1.33
TDP1-203ENST00000393454 IGHV3OR16-8A0A075B7F1 116 aa6.71□□□□□ -1.34
TDP1-203ENST00000393454 SCO2A0A1W2PP80 73 aa6.71□□□□□ -1.34
TDP1-203ENST00000393454 PPP5D1E7EU14 171 aa6.71□□□□□ -1.34
TDP1-203ENST00000393454 H3BUA1 57 aa6.71□□□□□ -1.34
TDP1-203ENST00000393454 NDUFB4O95168 129 aa6.71□□□□□ -1.34
TDP1-203ENST00000393454 OR2C1O95371 312 aa6.71□□□□□ -1.34
TDP1-203ENST00000393454 IGHV3-11P01762 117 aa6.71□□□□□ -1.34
TDP1-203ENST00000393454 SUMO1P63165 101 aaKnown RBP6.71□□□□□ -1.34
TDP1-203ENST00000393454 TMEM88Q6PEY1 159 aa6.71□□□□□ -1.34
TDP1-203ENST00000393454 ZNF600Q6ZNG1 722 aa6.71□□□□□ -1.34
TDP1-203ENST00000393454 FXYD5Q96DB9 178 aa6.71□□□□□ -1.34
TDP1-203ENST00000393454 USMG5Q96IX5 58 aa6.71□□□□□ -1.34
TDP1-203ENST00000393454 SHANK2-AS3Q9BTD1 123 aa6.71□□□□□ -1.34
TDP1-203ENST00000393454 C7orf77A4D0Y5 90 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 H3BRN7 92 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 H3BTX0 84 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 NDUFS6O75380 124 aaKnown RBP6.7□□□□□ -1.34
TDP1-203ENST00000393454 NBEAP1P0C6P0 100 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 NPPCP23582 126 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 RAB9AP51151 201 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 RANP62826 216 aaKnown RBP6.7□□□□□ -1.34
TDP1-203ENST00000393454 TMEM241Q24JQ0 296 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 FAM74A3Q4VXF1 159 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 TOMM20LQ6UXN7 152 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 SUN5Q8TC36 379 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 NAT8Q9UHE5 227 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 RABAC1Q9UI14 185 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 ARL2-SNX15V9GYD0 113 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 A0A0G2JLM5 398 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 A0A1W2PRE2 83 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 ZNF98A6NK75 572 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 BMPR1BO00238 502 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 IGLV1-40P01703 118 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 GP9P14770 177 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 ARL3P36405 182 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 CFHR3Q02985 330 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 RELQ04864 619 aaPredicted RBP6.7□□□□□ -1.34
TDP1-203ENST00000393454 RHEBQ15382 184 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 ADIRFQ15847 76 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 BPIFA4PQ86YQ2 179 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 CBLN2Q8IUK8 224 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 DERL1Q9BUN8 251 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 ZNF702PQ9H963 129 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 ZNF580Q9UK33 172 aa6.7□□□□□ -1.34
TDP1-203ENST00000393454 GGTLC3B5MD39 225 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 DNASE2O00115 360 aaPredicted RBP6.69□□□□□ -1.34
TDP1-203ENST00000393454 BRI3O95415 125 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 CRYBB3P26998 211 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 S100A7P31151 101 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 SLC35B1P78383 322 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 OR4F17Q8NGA8 305 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 OR4X2Q8NGF9 303 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 SMR3AQ99954 134 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 SDF2L1Q9HCN8 221 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 TMEM14CQ9P0S9 112 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 AKAP9Q99996 3911 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 TRBV12-3P01733 135 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 HIST1H1EP10412 219 aaKnown RBP6.69□□□□□ -1.34
TDP1-203ENST00000393454 PNRC1Q12796 327 aaPredicted RBP6.69□□□□□ -1.34
TDP1-203ENST00000393454 C10orf99Q6UWK7 81 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 TMEM86BQ8N661 226 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 OR5B12Q96R08 314 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 ATP6V0BQ99437 205 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 ELOVL1Q9BW60 279 aa6.69□□□□□ -1.34
TDP1-203ENST00000393454 PGPA6NDG6 321 aa6.68□□□□□ -1.34
TDP1-203ENST00000393454 DNAJC9-AS1A6NH13 148 aa6.68□□□□□ -1.34
TDP1-203ENST00000393454 ZNF207O43670 478 aaKnown RBP6.68□□□□□ -1.34
TDP1-203ENST00000393454 IGHG4P01861 327 aa6.68□□□□□ -1.34
TDP1-203ENST00000393454 SLC25A5P05141 298 aaKnown RBP6.68□□□□□ -1.34
TDP1-203ENST00000393454 RPL15P61313 204 aaKnown RBP6.68□□□□□ -1.34
TDP1-203ENST00000393454 SCGB2A2Q13296 93 aa6.68□□□□□ -1.34
TDP1-203ENST00000393454 TEX38Q6PEX7 206 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms