RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 CT45A10P0DMU9 189 aa8.58□□□□□ -1.04
CALD1-203ENST00000393118 C22orf34Q6ZV56 151 aa8.58□□□□□ -1.04
CALD1-203ENST00000393118 CLUHP3Q96NS8 147 aa8.58□□□□□ -1.04
CALD1-203ENST00000393118 MGAQ8IWI9 3026 aa8.58□□□□□ -1.04
CALD1-203ENST00000393118 IGHV3-35A0A0C4DH35 117 aa8.58□□□□□ -1.04
CALD1-203ENST00000393118 SERTM2A0A1B0GWG4 89 aa8.58□□□□□ -1.04
CALD1-203ENST00000393118 SRRM4A7MD48 611 aaKnown RBP8.58□□□□□ -1.04
CALD1-203ENST00000393118 DIAPH2-AS1Q14236 149 aa8.58□□□□□ -1.04
CALD1-203ENST00000393118 TMEM30BQ3MIR4 351 aa8.58□□□□□ -1.04
CALD1-203ENST00000393118 OR2K2Q8NGT1 345 aa8.58□□□□□ -1.04
CALD1-203ENST00000393118 PRSS3P2Q8NHM4 247 aa8.58□□□□□ -1.04
CALD1-203ENST00000393118 WNT2P09544 360 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 CFHR2P36980 270 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 CEACAM3P40198 252 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 TBR1Q16650 682 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 COX19Q49B96 90 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 ZNF114Q8NC26 417 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 OR4F17Q8NGA8 305 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 UBTD1Q9HAC8 227 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 ESDP10768 282 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 LGALS7P47929 136 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 FER1L6-AS1Q8NA97 138 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 OR10AG1Q8NH19 301 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 Q8TCH9 128 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 EAF1Q96JC9 268 aaPredicted RBP8.57□□□□□ -1.04
CALD1-203ENST00000393118 SLC25A33Q9BSK2 321 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 AMY1AP04745 511 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 COL8A1P27658 744 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 NOTCH3Q9UM47 2321 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 RAXQ9Y2V3 346 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 CHTOPQ9Y3Y2 248 aaKnown RBP8.57□□□□□ -1.04
CALD1-203ENST00000393118 H0YJW9 148 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 GPR183P32249 361 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 CSN1S1P47710 185 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 GNG5P63218 68 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 TMEM133Q9H2Q1 129 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 TMEM14BQ9NUH8 114 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 JKAMPQ9P055 326 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 HIGD1AQ9Y241 93 aa8.57□□□□□ -1.04
CALD1-203ENST00000393118 MRPS16Q9Y3D3 137 aaKnown RBP8.57□□□□□ -1.04
CALD1-203ENST00000393118 DSPP15924 2871 aaKnown RBP8.56□□□□□ -1.04
CALD1-203ENST00000393118 P01737 135 aa8.56□□□□□ -1.04
CALD1-203ENST00000393118 GATA4P43694 442 aa8.56□□□□□ -1.04
CALD1-203ENST00000393118 TMPRSS3P57727 454 aa8.56□□□□□ -1.04
CALD1-203ENST00000393118 PRNTQ86SH4 94 aa8.56□□□□□ -1.04
CALD1-203ENST00000393118 TMEM116Q8NCL8 245 aa8.56□□□□□ -1.04
CALD1-203ENST00000393118 TMUB1Q9BVT8 246 aa8.56□□□□□ -1.04
CALD1-203ENST00000393118 SSBP4Q9BWG4 385 aaPredicted RBP8.56□□□□□ -1.04
CALD1-203ENST00000393118 E7EQL1 145 aa8.56□□□□□ -1.04
CALD1-203ENST00000393118 KIR3DL3Q8N743 410 aa8.56□□□□□ -1.04
CALD1-203ENST00000393118 STXBP6Q8NFX7 210 aa8.56□□□□□ -1.04
CALD1-203ENST00000393118 TMSB15BA0A087X1C1 80 aa8.56□□□□□ -1.04
CALD1-203ENST00000393118 GUSBP1Q15486 140 aa8.56□□□□□ -1.04
CALD1-203ENST00000393118 NUP37Q8NFH4 326 aa8.56□□□□□ -1.04
CALD1-203ENST00000393118 CACNG8Q8WXS5 425 aa8.56□□□□□ -1.04
CALD1-203ENST00000393118 ZNF257Q9Y2Q1 563 aa8.56□□□□□ -1.04
CALD1-203ENST00000393118 HCFC1P51610 2035 aa8.56□□□□□ -1.04
CALD1-203ENST00000393118 PMS2P5A8MQ11 134 aa8.55□□□□□ -1.04
CALD1-203ENST00000393118 K7EP13 123 aa8.55□□□□□ -1.04
CALD1-203ENST00000393118 NDUFB8O95169 186 aa8.55□□□□□ -1.04
CALD1-203ENST00000393118 TCF15Q12870 199 aa8.55□□□□□ -1.04
CALD1-203ENST00000393118 LINC00479Q96M42 142 aa8.55□□□□□ -1.04
CALD1-203ENST00000393118 HLA-DRB1P01911 266 aa8.55□□□□□ -1.04
CALD1-203ENST00000393118 CLEC3BP05452 202 aa8.55□□□□□ -1.04
CALD1-203ENST00000393118 IGHV1-8P0DP01 117 aa8.55□□□□□ -1.04
CALD1-203ENST00000393118 RNASE2P10153 161 aaKnown RBP8.55□□□□□ -1.04
CALD1-203ENST00000393118 NAV3Q8IVL0 2385 aa8.55□□□□□ -1.04
CALD1-203ENST00000393118 IGHV3OR16-8A0A075B7F1 116 aa8.55□□□□□ -1.04
CALD1-203ENST00000393118 NBEAP1P0C6P0 100 aa8.55□□□□□ -1.04
CALD1-203ENST00000393118 FOXL1Q12952 345 aa8.55□□□□□ -1.04
CALD1-203ENST00000393118 ASPHD1Q5U4P2 390 aa8.55□□□□□ -1.04
CALD1-203ENST00000393118 PRSS33Q8NF86 280 aa8.55□□□□□ -1.04
CALD1-203ENST00000393118 C19orf24Q9BVV8 132 aa8.55□□□□□ -1.04
CALD1-203ENST00000393118 CEACAM4O75871 244 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 LIPFP07098 398 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 IGLL1P15814 213 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 C2orf83Q53S99 150 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 AAMDCQ9H7C9 122 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 PIEZO1Q92508 2521 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 TRBV9A0A0B4J1U6 114 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 A0A1W2PS18 150 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 LHBP01229 141 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 MRPL32Q9BYC8 188 aaKnown RBP8.54□□□□□ -1.04
CALD1-203ENST00000393118 LOC105371242A0A075B767 164 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 COL8A2P25067 703 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 PDLIM4P50479 330 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 RAB9AP51151 201 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 ATP5IP56385 69 aaPredicted RBP8.54□□□□□ -1.04
CALD1-203ENST00000393118 RPL11P62913 178 aaKnown RBP8.54□□□□□ -1.04
CALD1-203ENST00000393118 ECSCRQ19T08 205 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 FAM231BA6NCW3 169 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 IGHV3-23P01764 117 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 PPBPP02775 128 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 AREGP15514 252 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 NPPCP23582 126 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 FCGR2BP31994 310 aaPredicted RBP8.54□□□□□ -1.04
CALD1-203ENST00000393118 PPP1R27Q86WC6 154 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 TPSG1Q9NRR2 321 aa8.54□□□□□ -1.04
CALD1-203ENST00000393118 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.53□□□□□ -1.04
CALD1-203ENST00000393118 PEX7O00628 323 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms