RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 COX6B1P14854 86 aa14.28□□□□□ -0.12
ACTN4-202ENST00000390009 CNN1P51911 297 aaKnown RBP14.28□□□□□ -0.12
ACTN4-202ENST00000390009 RNF125Q96EQ8 232 aa14.28□□□□□ -0.12
ACTN4-202ENST00000390009 LINC00479Q96M42 142 aa14.28□□□□□ -0.12
ACTN4-202ENST00000390009 GAR1Q9NY12 217 aaKnown RBP14.28□□□□□ -0.12
ACTN4-202ENST00000390009 C21orf62Q9NYP8 219 aa14.28□□□□□ -0.12
ACTN4-202ENST00000390009 FAM208BQ5VWN6 2430 aa14.28□□□□□ -0.12
ACTN4-202ENST00000390009 A0A0U1RQK1 487 aa14.27□□□□□ -0.12
ACTN4-202ENST00000390009 ATP6V0E1O15342 81 aa14.27□□□□□ -0.12
ACTN4-202ENST00000390009 IGLV2-8P01709 118 aa14.27□□□□□ -0.12
ACTN4-202ENST00000390009 TYMSP04818 313 aa14.27□□□□□ -0.12
ACTN4-202ENST00000390009 MSMBP08118 114 aa14.27□□□□□ -0.12
ACTN4-202ENST00000390009 NDUFA6P56556 154 aa14.27□□□□□ -0.12
ACTN4-202ENST00000390009 TAS2R60P59551 318 aa14.27□□□□□ -0.12
ACTN4-202ENST00000390009 ERVFC1-1P60608 527 aa14.27□□□□□ -0.12
ACTN4-202ENST00000390009 YPEL3P61236 119 aaPredicted RBP14.27□□□□□ -0.12
ACTN4-202ENST00000390009 Q56UQ5 140 aa14.27□□□□□ -0.12
ACTN4-202ENST00000390009 CDPF1Q6NVV7 123 aa14.27□□□□□ -0.12
ACTN4-202ENST00000390009 TMUB1Q9BVT8 246 aa14.27□□□□□ -0.12
ACTN4-202ENST00000390009 UBR5O95071 2799 aaPredicted RBP14.27□□□□□ -0.13
ACTN4-202ENST00000390009 IL4P05112 153 aa14.27□□□□□ -0.13
ACTN4-202ENST00000390009 ECSCRQ19T08 205 aa14.27□□□□□ -0.13
ACTN4-202ENST00000390009 UNQ5815/PRO19632Q6UWF5 114 aa14.27□□□□□ -0.13
ACTN4-202ENST00000390009 FAM110DQ8TAY7 271 aaPredicted RBP14.27□□□□□ -0.13
ACTN4-202ENST00000390009 TMEM14CQ9P0S9 112 aa14.27□□□□□ -0.13
ACTN4-202ENST00000390009 ZFHX3Q15911 3703 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 A1L4Q6 167 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 PGPA6NDG6 321 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 SLC17A3O00476 420 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 GCGP01275 180 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 SLC25A5P05141 298 aaKnown RBP14.26□□□□□ -0.13
ACTN4-202ENST00000390009 GNG5P63218 68 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 C5orf56Q8N8D9 126 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 SHANK2-AS3Q9BTD1 123 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 EPDR1Q9UM22 224 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 WI2-2373I1.2A0A1W2PRP0 233 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 SH2D7A6NKC9 451 aaPredicted RBP14.26□□□□□ -0.13
ACTN4-202ENST00000390009 H3BRN7 92 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 H3BTX0 84 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 IGHV3-23P01764 117 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 IGHV4-38-2P0DP08 117 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 PAX1P15863 534 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 DSCR9P59020 149 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 DEFA6Q01524 100 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 BTF3L4Q96K17 158 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 FBXL7Q9UJT9 491 aa14.26□□□□□ -0.13
ACTN4-202ENST00000390009 EPG5Q9HCE0 2579 aa14.25□□□□□ -0.13
ACTN4-202ENST00000390009 CELSR1Q9NYQ6 3014 aa14.25□□□□□ -0.13
ACTN4-202ENST00000390009 TMEM219Q86XT9 240 aa14.25□□□□□ -0.13
ACTN4-202ENST00000390009 C7orf69Q9H7B7 122 aa14.25□□□□□ -0.13
ACTN4-202ENST00000390009 IL36BQ9NZH7 164 aa14.25□□□□□ -0.13
ACTN4-202ENST00000390009 V9GYV3 84 aa14.25□□□□□ -0.13
ACTN4-202ENST00000390009 TRAV34A0A0B4J273 112 aa14.24□□□□□ -0.13
ACTN4-202ENST00000390009 ZNF320A2RRD8 509 aa14.24□□□□□ -0.13
ACTN4-202ENST00000390009 HIST1H1EP10412 219 aaKnown RBP14.24□□□□□ -0.13
ACTN4-202ENST00000390009 MGST1P10620 155 aaKnown RBP14.24□□□□□ -0.13
ACTN4-202ENST00000390009 HIST1H1BP16401 226 aaKnown RBP14.24□□□□□ -0.13
ACTN4-202ENST00000390009 TMEM68Q96MH6 324 aa14.24□□□□□ -0.13
ACTN4-202ENST00000390009 RNASE7Q9H1E1 156 aaKnown RBP14.24□□□□□ -0.13
ACTN4-202ENST00000390009 MEGF9Q9H1U4 602 aa14.24□□□□□ -0.13
ACTN4-202ENST00000390009 Q9H3A6 140 aa14.24□□□□□ -0.13
ACTN4-202ENST00000390009 ZNF586Q9NXT0 402 aa14.24□□□□□ -0.13
ACTN4-202ENST00000390009 CELSR2Q9HCU4 2923 aa14.24□□□□□ -0.13
ACTN4-202ENST00000390009 LRRK2Q5S007 2527 aa14.24□□□□□ -0.13
ACTN4-202ENST00000390009 LINC01548A6NM66 108 aa14.24□□□□□ -0.13
ACTN4-202ENST00000390009 ISLRO14498 428 aa14.24□□□□□ -0.13
ACTN4-202ENST00000390009 USF2Q15853 346 aaPredicted RBP14.24□□□□□ -0.13
ACTN4-202ENST00000390009 NHLRC2Q8NBF2 726 aa14.24□□□□□ -0.13
ACTN4-202ENST00000390009 PIFOQ8TCI5 191 aa14.24□□□□□ -0.13
ACTN4-202ENST00000390009 PRDM13Q9H4Q3 707 aa14.24□□□□□ -0.13
ACTN4-202ENST00000390009 MOB4Q9Y3A3 225 aa14.24□□□□□ -0.13
ACTN4-202ENST00000390009 OR2T8A6NH00 312 aa14.23□□□□□ -0.13
ACTN4-202ENST00000390009 C5orf17Q8NAS9 161 aa14.23□□□□□ -0.13
ACTN4-202ENST00000390009 OSTCQ9NRP0 149 aa14.23□□□□□ -0.13
ACTN4-202ENST00000390009 B4DSR2 109 aa14.23□□□□□ -0.13
ACTN4-202ENST00000390009 TMEM183BQ1AE95 376 aa14.23□□□□□ -0.13
ACTN4-202ENST00000390009 ACTL10Q5JWF8 245 aa14.23□□□□□ -0.13
ACTN4-202ENST00000390009 BAGE2Q86Y30 109 aa14.23□□□□□ -0.13
ACTN4-202ENST00000390009 BPIFA4PQ86YQ2 179 aa14.23□□□□□ -0.13
ACTN4-202ENST00000390009 OR10D4PQ8NGN7 298 aa14.23□□□□□ -0.13
ACTN4-202ENST00000390009 RPH3ALQ9UNE2 315 aa14.23□□□□□ -0.13
ACTN4-202ENST00000390009 CSMD2Q7Z408 3487 aa14.22□□□□□ -0.13
ACTN4-202ENST00000390009 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.22□□□□□ -0.133e-8■■■□□ 16
ACTN4-202ENST00000390009 G3V318 75 aa14.22□□□□□ -0.13
ACTN4-202ENST00000390009 FCGR2BP31994 310 aaPredicted RBP14.22□□□□□ -0.13
ACTN4-202ENST00000390009 KLK9Q2XQG4 91 aa14.22□□□□□ -0.13
ACTN4-202ENST00000390009 IBA57Q5T440 356 aaKnown RBP14.22□□□□□ -0.13
ACTN4-202ENST00000390009 BCL6BQ8N143 479 aaPredicted RBP14.22□□□□□ -0.13
ACTN4-202ENST00000390009 VN1R17PQ8TDU5 208 aa14.22□□□□□ -0.13
ACTN4-202ENST00000390009 TXN2Q99757 166 aa14.22□□□□□ -0.13
ACTN4-202ENST00000390009 ATG101Q9BSB4 218 aa14.22□□□□□ -0.13
ACTN4-202ENST00000390009 HIF1ANQ9NWT6 349 aa14.22□□□□□ -0.13
ACTN4-202ENST00000390009 KLK9Q9UKQ9 250 aa14.22□□□□□ -0.13
ACTN4-202ENST00000390009 ANKRD17O75179 2603 aaKnown RBP14.22□□□□□ -0.13
ACTN4-202ENST00000390009 SCGB2A1O75556 95 aa14.21□□□□□ -0.13
ACTN4-202ENST00000390009 CTSGP08311 255 aa14.21□□□□□ -0.13
ACTN4-202ENST00000390009 SLC25A16P16260 332 aa14.21□□□□□ -0.13
ACTN4-202ENST00000390009 UBE2G1P62253 170 aa14.21□□□□□ -0.13
ACTN4-202ENST00000390009 RPEL1Q2QD12 228 aa14.21□□□□□ -0.13
ACTN4-202ENST00000390009 C15orf32Q32M92 178 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms