RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 SAMD13Q5VXD3 122 aa10.72□□□□□ -0.69
TRAPPC9-201ENST00000389328 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.71□□□□□ -0.695e-6■■■■□ 22.8
TRAPPC9-201ENST00000389328 RNFT1Q5M7Z0 435 aa10.71□□□□□ -0.69
TRAPPC9-201ENST00000389328 C11orf52Q96A22 123 aa10.71□□□□□ -0.69
TRAPPC9-201ENST00000389328 IFI27L1Q96BM0 104 aa10.71□□□□□ -0.69
TRAPPC9-201ENST00000389328 A0A1B0GWB2 263 aa10.71□□□□□ -0.69
TRAPPC9-201ENST00000389328 PMS2P5A8MQ11 134 aa10.71□□□□□ -0.69
TRAPPC9-201ENST00000389328 NCR2O95944 276 aa10.71□□□□□ -0.69
TRAPPC9-201ENST00000389328 Q6ZR03 302 aa10.71□□□□□ -0.69
TRAPPC9-201ENST00000389328 FER1L6-AS1Q8NA97 138 aa10.71□□□□□ -0.69
TRAPPC9-201ENST00000389328 IGHV3-66A0A0C4DH42 116 aa10.71□□□□□ -0.7
TRAPPC9-201ENST00000389328 A0A0G2JLM5 398 aa10.71□□□□□ -0.7
TRAPPC9-201ENST00000389328 TTC9CQ8N5M4 171 aa10.71□□□□□ -0.7
TRAPPC9-201ENST00000389328 D6R8Y8 96 aa10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 LEPP41159 167 aa10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 HERVK_113P61574 105 aa10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 ZNF295-AS1Q8N0V1 137 aa10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 TMEM14BQ9NUH8 114 aa10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 OR11H12B2RN74 326 aa10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 PSG9Q00887 426 aa10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 SMAGPQ0VAQ4 97 aa10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 OR11H1Q8NG94 326 aa10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 OR11H2Q8NH07 326 aa10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 RNASE8Q8TDE3 154 aaKnown RBP10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 RALYQ9UKM9 306 aaKnown RBP10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 IGHV1-46P01743 117 aa10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 CEACAM8P31997 349 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 MEF2CQ06413 473 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 Q6AWC8 147 aa10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 NEUROG1Q92886 237 aa10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 CD5LO43866 347 aa10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 RABAC1Q9UI14 185 aa10.7□□□□□ -0.7
TRAPPC9-201ENST00000389328 IGLV2-14P01704 120 aa10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 EVI2AP22794 236 aa10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 SLC25A48Q6ZT89 311 aaKnown RBP10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 C8orf46Q8TAG6 207 aa10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 TNCP24821 2201 aa10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 IGHV2-26A0A0B4J1V2 119 aa10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 A0A1B0GW15 77 aa10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 SMIM27A0A1W2PRY6 76 aa10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 C19orf67A6NJJ6 358 aa10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 F2RL2O00254 374 aa10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 HSD52Q0P140 79 aa10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 VWC2Q2TAL6 325 aa10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 PPP1R27Q86WC6 154 aa10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 OR4X2Q8NGF9 303 aa10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 DUX4L9Q6RFH8 374 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 RAB1BQ9H0U4 201 aa10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 C1RLQ9NZP8 487 aa10.69□□□□□ -0.7
TRAPPC9-201ENST00000389328 M0R3E3 92 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 LOXL3P58215 753 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 OR1N2Q8NGR9 330 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 TMEM238LA0A1B0GVL6 79 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 A6NJY4 79 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 NPIPB5A8MRT5 1133 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 C17orf100A8MU93 164 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 C15orf65H3BRN8 121 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 ITGB1BP1O14713 200 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 NDUFA3O95167 84 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 KIR3DS1Q14943 382 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 GTF3C1Q12789 2109 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 WNT2P09544 360 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 ARMS2P0C7Q2 107 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 DLX1P56177 255 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 SAMD5Q5TGI4 173 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 RNF125Q96EQ8 232 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 FAM231BA6NCW3 169 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 PRR20EP86478 221 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 PRR20CP86479 221 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 PRR20DP86480 221 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 PRR20BP86481 221 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 PRR20AP86496 221 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 EBLN2Q6P2I7 272 aa10.68□□□□□ -0.7
TRAPPC9-201ENST00000389328 H0YJW9 148 aa10.67□□□□□ -0.7
TRAPPC9-201ENST00000389328 ZNF418Q8TF45 676 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC9-201ENST00000389328 C16orf92Q96LL3 132 aa10.67□□□□□ -0.7
TRAPPC9-201ENST00000389328 MED13Q9UHV7 2174 aa10.67□□□□□ -0.7
TRAPPC9-201ENST00000389328 A0A1B0GV72 72 aa10.67□□□□□ -0.7
TRAPPC9-201ENST00000389328 IFI27P40305 119 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC9-201ENST00000389328 BCL6BQ8N143 479 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC9-201ENST00000389328 MRPL16Q9NX20 251 aaKnown RBP10.67□□□□□ -0.7
TRAPPC9-201ENST00000389328 IGHV1-24A0A0C4DH33 117 aa10.67□□□□□ -0.7
TRAPPC9-201ENST00000389328 KRTAP27-1Q3LI81 207 aa10.67□□□□□ -0.7
TRAPPC9-201ENST00000389328 LYZL1Q6UWQ5 148 aa10.67□□□□□ -0.7
TRAPPC9-201ENST00000389328 A0A0C4DFX4 3053 aa10.67□□□□□ -0.7
TRAPPC9-201ENST00000389328 MMP23AO75900 390 aa10.66□□□□□ -0.7
TRAPPC9-201ENST00000389328 IGKV3-15P01624 115 aa10.66□□□□□ -0.7
TRAPPC9-201ENST00000389328 BSPH1Q075Z2 132 aa10.66□□□□□ -0.7
TRAPPC9-201ENST00000389328 TMEM249Q2WGJ8 235 aa10.66□□□□□ -0.7
TRAPPC9-201ENST00000389328 TMEM167AQ8TBQ9 72 aa10.66□□□□□ -0.7
TRAPPC9-201ENST00000389328 SLC25A2Q9BXI2 301 aa10.66□□□□□ -0.7
TRAPPC9-201ENST00000389328 SLC25A39Q9BZJ4 359 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC9-201ENST00000389328 SMKR1H3BMG3 65 aa10.66□□□□□ -0.7
TRAPPC9-201ENST00000389328 FTH1P19P0C7X4 201 aa10.66□□□□□ -0.7
TRAPPC9-201ENST00000389328 MDS2Q8NDY4 140 aa10.66□□□□□ -0.7
TRAPPC9-201ENST00000389328 FNDC10F2Z333 226 aa10.66□□□□□ -0.7
TRAPPC9-201ENST00000389328 M0R381 172 aa10.66□□□□□ -0.7
TRAPPC9-201ENST00000389328 TGFAP01135 160 aa10.66□□□□□ -0.7
TRAPPC9-201ENST00000389328 AMN1Q8IY45 258 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms