RNA–Protein interactions for RNA: ENST00000385247.1

MIR548B-201, Transcript of microRNA 548b, humanhuman

BASIC

Gene MIR548B, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548B-201ENST00000385247 TAS2R41P59536 307 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 GNG3P63215 75 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 CDK6Q00534 326 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 RTL8BQ17RB0 113 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 MPV17LQ2QL34 196 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 DEFB115Q30KQ5 88 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 C1orf137Q5JT78 98 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 SMIM15Q7Z3B0 74 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 S100A7AQ86SG5 101 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 FAM19A2Q8N3H0 131 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 Q8N814 137 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 OR10K1Q8NGX5 313 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 STAG3L4Q8TBR4 150 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 WFDC5Q8TCV5 224 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 MCEEQ96PE7 176 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 RTL8AQ9BWD3 113 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 SPANXA1Q9NS26 97 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 SPANXCQ9NY87 97 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 ORMDL1Q9P0S3 153 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 PCTPQ9UKL6 214 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 UFC1Q9Y3C8 167 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 EIF3AQ14152 1382 aaKnown RBP0.66□□□□□ -2.3
MIR548B-201ENST00000385247 SHANK3Q9BYB0 1731 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 ATG2BQ96BY7 2078 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 CUL9Q8IWT3 2517 aa0.66□□□□□ -2.3
MIR548B-201ENST00000385247 NUP205Q92621 2012 aa0.65□□□□□ -2.3
MIR548B-201ENST00000385247 UHRF1BP1Q6BDS2 1440 aa0.65□□□□□ -2.3
MIR548B-201ENST00000385247 KMT2EQ8IZD2 1858 aa0.65□□□□□ -2.3
MIR548B-201ENST00000385247 ZNF638Q14966 1978 aaKnown RBP0.65□□□□□ -2.31
MIR548B-201ENST00000385247 TRAV10A0A0B4J240 114 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 TRAV3A0A0B4J244 114 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 MAP1LC3B2A6NCE7 125 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 ZNF736B4DX44 427 aaPredicted RBP0.65□□□□□ -2.31
MIR548B-201ENST00000385247 C5orf58C9J3I9 102 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 F8W1H4 67 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 RER1O15258 196 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 LYZL6O75951 148 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 ERC2-IT1O76042 136 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 IFNA21P01568 189 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 C1QBP02746 253 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 SRIP30626 198 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 TMBIM6P55061 237 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 DSCR4P56555 118 aaPredicted RBP0.65□□□□□ -2.31
MIR548B-201ENST00000385247 MRPS36P82909 103 aaKnown RBP0.65□□□□□ -2.31
MIR548B-201ENST00000385247 GDF5OSQ5U4N7 250 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 C1orf140Q5VVS0 124 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 PPP1R2P3Q6NXS1 205 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 SOSTDC1Q6X4U4 206 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 GKN2Q86XP6 184 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 Q8N2B8 174 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 LRRC18Q8N456 261 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 OR52R1Q8NGF1 315 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 OR4B1Q8NGF8 309 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 OR10AG1Q8NH19 301 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 SKA2Q8WVK7 121 aaPredicted RBP0.65□□□□□ -2.31
MIR548B-201ENST00000385247 CHCHD1Q96BP2 118 aaKnown RBP0.65□□□□□ -2.31
MIR548B-201ENST00000385247 MUCL1Q96DR8 90 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 TMEM126AQ9H061 195 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 PCBD2Q9H0N5 130 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 TMEM138Q9NPI0 162 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 MED29Q9NX70 200 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 HSPB8Q9UJY1 196 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 TNFSF18Q9UNG2 199 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 NUBP2Q9Y5Y2 271 aa0.65□□□□□ -2.31
MIR548B-201ENST00000385247 DOCK10Q96BY6 2186 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 TNS3Q68CZ2 1445 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 MIA2Q96PC5 1412 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 TRAV27A0A087WT01 109 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 IGKV1-9A0A0C4DH69 117 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 TMEM238C9JI98 176 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 E7EUB6 86 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 TMEM256-PLSCR3K7ERE1 68 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 M0R2N4 97 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 M0R378 163 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 TRGC2P03986 189 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 LYNX1P0DP58 116 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 RPL35P42766 123 aaKnown RBP0.64□□□□□ -2.31
MIR548B-201ENST00000385247 SRP9P49458 86 aaKnown RBP0.64□□□□□ -2.31
MIR548B-201ENST00000385247 HBBP68871 147 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 KLRD1Q13241 179 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 LYG2Q86SG7 212 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 ANGPTL5Q86XS5 388 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 GRPEL2Q8TAA5 225 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 ZNF418Q8TF45 676 aaPredicted RBP0.64□□□□□ -2.31
MIR548B-201ENST00000385247 PATE1Q8WXA2 126 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 RAB37Q96AX2 223 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 PLEKHB2Q96CS7 222 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 ADAT3Q96EY9 351 aaPredicted RBP0.64□□□□□ -2.31
MIR548B-201ENST00000385247 ODF3Q96PU9 254 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 LXNQ9BS40 222 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 OR2H1Q9GZK4 316 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 CDC42SE1Q9NRR8 79 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 REREQ9P2R6 1566 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 ATAD5Q96QE3 1844 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 COL4A2P08572 1712 aa0.64□□□□□ -2.31
MIR548B-201ENST00000385247 ICE1Q9Y2F5 2266 aa0.63□□□□□ -2.31
MIR548B-201ENST00000385247 MED1Q15648 1581 aaPredicted RBP0.63□□□□□ -2.31
MIR548B-201ENST00000385247 LOC110117498A0A087WWA1 95 aa0.63□□□□□ -2.31
MIR548B-201ENST00000385247 TSTD3H0UI37 97 aa0.63□□□□□ -2.31
MIR548B-201ENST00000385247 KPNA4O00629 521 aaPredicted RBP0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms