RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 SOSTDC1Q6X4U4 206 aa1.75□□□□□ -2.13
RNU6-40P-201ENST00000384254 GPER1Q99527 375 aa1.75□□□□□ -2.13
RNU6-40P-201ENST00000384254 LYRM2Q9NU23 88 aaPredicted RBP1.75□□□□□ -2.13
RNU6-40P-201ENST00000384254 MED29Q9NX70 200 aa1.75□□□□□ -2.13
RNU6-40P-201ENST00000384254 TRBV6-7A0A0A0MS04 114 aa1.74□□□□□ -2.13
RNU6-40P-201ENST00000384254 DEFB113Q30KQ7 82 aa1.74□□□□□ -2.13
RNU6-40P-201ENST00000384254 TEX261Q6UWH6 196 aa1.74□□□□□ -2.13
RNU6-40P-201ENST00000384254 TEX37Q96LM6 180 aa1.74□□□□□ -2.13
RNU6-40P-201ENST00000384254 U3KQ87 197 aa1.74□□□□□ -2.13
RNU6-40P-201ENST00000384254 ARHGEF28Q8N1W1 1705 aaKnown RBP1.74□□□□□ -2.13
RNU6-40P-201ENST00000384254 MYH10P35580 1976 aa1.73□□□□□ -2.13
RNU6-40P-201ENST00000384254 CCDC160A6NGH7 325 aa1.73□□□□□ -2.13
RNU6-40P-201ENST00000384254 RIIAD1A6NNX1 92 aa1.73□□□□□ -2.13
RNU6-40P-201ENST00000384254 DHFRP00374 187 aa1.73□□□□□ -2.13
RNU6-40P-201ENST00000384254 NFYBP25208 207 aa1.73□□□□□ -2.13
RNU6-40P-201ENST00000384254 MALSU1Q96EH3 234 aa1.73□□□□□ -2.13
RNU6-40P-201ENST00000384254 OR2J1Q9GZK6 312 aa1.73□□□□□ -2.13
RNU6-40P-201ENST00000384254 SH3BGRL3Q9H299 93 aa1.73□□□□□ -2.13
RNU6-40P-201ENST00000384254 IL20Q9NYY1 176 aa1.73□□□□□ -2.13
RNU6-40P-201ENST00000384254 LY96Q9Y6Y9 160 aa1.73□□□□□ -2.13
RNU6-40P-201ENST00000384254 COL4A5P29400 1685 aa1.73□□□□□ -2.13
RNU6-40P-201ENST00000384254 EIF3AQ14152 1382 aaKnown RBP1.72□□□□□ -2.13
RNU6-40P-201ENST00000384254 LAMB2P55268 1798 aa1.72□□□□□ -2.13
RNU6-40P-201ENST00000384254 EXPH5Q8NEV8 1989 aa1.72□□□□□ -2.13
RNU6-40P-201ENST00000384254 E5RI56 91 aa1.72□□□□□ -2.13
RNU6-40P-201ENST00000384254 TMEM256-PLSCR3K7ERE1 68 aa1.72□□□□□ -2.13
RNU6-40P-201ENST00000384254 M0R378 163 aa1.72□□□□□ -2.13
RNU6-40P-201ENST00000384254 PPP1R2P41236 205 aa1.72□□□□□ -2.13
RNU6-40P-201ENST00000384254 Q8N814 137 aa1.72□□□□□ -2.13
RNU6-40P-201ENST00000384254 OR10K1Q8NGX5 313 aa1.72□□□□□ -2.13
RNU6-40P-201ENST00000384254 ZNF418Q8TF45 676 aaPredicted RBP1.72□□□□□ -2.13
RNU6-40P-201ENST00000384254 ODF3Q96PU9 254 aa1.72□□□□□ -2.13
RNU6-40P-201ENST00000384254 GINS3Q9BRX5 216 aa1.72□□□□□ -2.13
RNU6-40P-201ENST00000384254 NPCDR1Q9BY65 106 aa1.72□□□□□ -2.13
RNU6-40P-201ENST00000384254 PCTPQ9UKL6 214 aa1.72□□□□□ -2.13
RNU6-40P-201ENST00000384254 SCN8AQ9UQD0 1980 aa1.72□□□□□ -2.13
RNU6-40P-201ENST00000384254 TCRBV4S1A1TA0A5B7 111 aa1.71□□□□□ -2.14
RNU6-40P-201ENST00000384254 IFNA14P01570 189 aa1.71□□□□□ -2.14
RNU6-40P-201ENST00000384254 HLA-EP13747 358 aa1.71□□□□□ -2.14
RNU6-40P-201ENST00000384254 TCTAP57738 103 aa1.71□□□□□ -2.14
RNU6-40P-201ENST00000384254 CNBPP62633 177 aaKnown RBP1.71□□□□□ -2.14
RNU6-40P-201ENST00000384254 SNCBQ16143 134 aa1.71□□□□□ -2.14
RNU6-40P-201ENST00000384254 C2orf82Q6UX34 121 aa1.71□□□□□ -2.14
RNU6-40P-201ENST00000384254 FAM19A2Q8N3H0 131 aa1.71□□□□□ -2.14
RNU6-40P-201ENST00000384254 ST6GALNAC3Q8NDV1 305 aa1.71□□□□□ -2.14
RNU6-40P-201ENST00000384254 PBOV1Q9GZY1 135 aa1.71□□□□□ -2.14
RNU6-40P-201ENST00000384254 CEP192Q8TEP8 1941 aa1.7□□□□□ -2.14
RNU6-40P-201ENST00000384254 DIDO1Q9BTC0 2240 aaKnown RBP1.7□□□□□ -2.14
RNU6-40P-201ENST00000384254 LOC110117498A0A087WWA1 95 aa1.7□□□□□ -2.14
RNU6-40P-201ENST00000384254 ZNF736B4DX44 427 aaPredicted RBP1.7□□□□□ -2.14
RNU6-40P-201ENST00000384254 DYNLT3P51808 116 aa1.7□□□□□ -2.14
RNU6-40P-201ENST00000384254 FAM74A1Q5RGS3 127 aa1.7□□□□□ -2.14
RNU6-40P-201ENST00000384254 Q8IYB0 196 aa1.7□□□□□ -2.14
RNU6-40P-201ENST00000384254 EXOC3-AS1Q8N2X6 119 aa1.7□□□□□ -2.14
RNU6-40P-201ENST00000384254 PPTC7Q8NI37 304 aa1.7□□□□□ -2.14
RNU6-40P-201ENST00000384254 LYSMD1Q96S90 227 aa1.7□□□□□ -2.14
RNU6-40P-201ENST00000384254 GID8Q9NWU2 228 aa1.7□□□□□ -2.14
RNU6-40P-201ENST00000384254 SCN3AQ9NY46 2000 aa1.7□□□□□ -2.14
RNU6-40P-201ENST00000384254 UHRF1BP1Q6BDS2 1440 aa1.69□□□□□ -2.14
RNU6-40P-201ENST00000384254 OGNP20774 298 aaKnown RBP1.69□□□□□ -2.14
RNU6-40P-201ENST00000384254 TAS2R41P59536 307 aa1.69□□□□□ -2.14
RNU6-40P-201ENST00000384254 GNG3P63215 75 aa1.69□□□□□ -2.14
RNU6-40P-201ENST00000384254 LINC00526Q96FQ7 95 aa1.69□□□□□ -2.14
RNU6-40P-201ENST00000384254 TP53RKQ96S44 253 aa1.69□□□□□ -2.14
RNU6-40P-201ENST00000384254 PRRT1Q99946 306 aa1.69□□□□□ -2.14
RNU6-40P-201ENST00000384254 POPDC3Q9HBV1 291 aa1.69□□□□□ -2.14
RNU6-40P-201ENST00000384254 CDC42SE1Q9NRR8 79 aa1.69□□□□□ -2.14
RNU6-40P-201ENST00000384254 SS18L2Q9UHA2 77 aa1.69□□□□□ -2.14
RNU6-40P-201ENST00000384254 HMCN1Q96RW7 5635 aa1.68□□□□□ -2.14
RNU6-40P-201ENST00000384254 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
RNU6-40P-201ENST00000384254 TRIQKQ629K1 86 aa1.68□□□□□ -2.14
RNU6-40P-201ENST00000384254 PPP1R2P3Q6NXS1 205 aa1.68□□□□□ -2.14
RNU6-40P-201ENST00000384254 C4orf22Q6V702 233 aa1.68□□□□□ -2.14
RNU6-40P-201ENST00000384254 LYG2Q86SG7 212 aa1.68□□□□□ -2.14
RNU6-40P-201ENST00000384254 CROCCP2Q86T23 111 aa1.68□□□□□ -2.14
RNU6-40P-201ENST00000384254 BORCS5Q969J3 196 aa1.68□□□□□ -2.14
RNU6-40P-201ENST00000384254 ZNF714Q96N38 554 aa1.68□□□□□ -2.14
RNU6-40P-201ENST00000384254 ZFP30Q9Y2G7 519 aa1.68□□□□□ -2.14
RNU6-40P-201ENST00000384254 UBR2Q8IWV8 1755 aa1.67□□□□□ -2.14
RNU6-40P-201ENST00000384254 TMEM238C9JI98 176 aa1.67□□□□□ -2.14
RNU6-40P-201ENST00000384254 C17orf112F2Z3M2 114 aa1.67□□□□□ -2.14
RNU6-40P-201ENST00000384254 M0R2N4 97 aa1.67□□□□□ -2.14
RNU6-40P-201ENST00000384254 OR10J4P0C629 311 aa1.67□□□□□ -2.14
RNU6-40P-201ENST00000384254 MPV17LQ2QL34 196 aa1.67□□□□□ -2.14
RNU6-40P-201ENST00000384254 STX19Q8N4C7 294 aa1.67□□□□□ -2.14
RNU6-40P-201ENST00000384254 OR5D14Q8NGL3 314 aa1.67□□□□□ -2.14
RNU6-40P-201ENST00000384254 OR4K15Q8NH41 348 aa1.67□□□□□ -2.14
RNU6-40P-201ENST00000384254 ZHX1-C8orf76Q96EF9 292 aa1.67□□□□□ -2.14
RNU6-40P-201ENST00000384254 TNRC6BQ9UPQ9 1833 aaKnown RBP1.67□□□□□ -2.14
RNU6-40P-201ENST00000384254 DOCK4Q8N1I0 1966 aa1.67□□□□□ -2.14
RNU6-40P-201ENST00000384254 POLEQ07864 2286 aa1.66□□□□□ -2.14
RNU6-40P-201ENST00000384254 DEFB115Q30KQ5 88 aa1.66□□□□□ -2.14
RNU6-40P-201ENST00000384254 GDF5OSQ5U4N7 250 aa1.66□□□□□ -2.14
RNU6-40P-201ENST00000384254 SMIM20Q8N5G0 67 aa1.66□□□□□ -2.14
RNU6-40P-201ENST00000384254 BIN3Q9NQY0 253 aa1.66□□□□□ -2.14
RNU6-40P-201ENST00000384254 UFC1Q9Y3C8 167 aa1.66□□□□□ -2.14
RNU6-40P-201ENST00000384254 KDM6AO15550 1401 aaPredicted RBP1.66□□□□□ -2.14
RNU6-40P-201ENST00000384254 INE1O15225 51 aa1.65□□□□□ -2.15
RNU6-40P-201ENST00000384254 TRGC2P03986 189 aa1.65□□□□□ -2.15
RNU6-40P-201ENST00000384254 IFNA4P05014 189 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms