RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 INAFM2P0DMQ5 153 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 IGKV1-13P0DP09 117 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 PRCDQ00LT1 54 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 TAL2Q16559 108 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 UBL5Q9BZL1 73 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 MBNL3Q9NUK0 354 aaKnown RBP4.85□□□□□ -1.63
RFX3-204ENST00000382004 KIF13BQ9NQT8 1826 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 KMT2EQ8IZD2 1858 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 J3QW42 95 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 MDS2Q8NDY4 140 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 ZNF407Q9C0G0 2248 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 RBM3P98179 157 aaKnown RBP4.85□□□□□ -1.63
RFX3-204ENST00000382004 IGFL4Q6B9Z1 124 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 TEX38Q6PEX7 206 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 DUTP33316 252 aaKnown RBP4.85□□□□□ -1.63
RFX3-204ENST00000382004 SPTA1P02549 2419 aa4.85□□□□□ -1.63
RFX3-204ENST00000382004 IGKV1D-43A0A0B4J1Z2 117 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 F5H768 121 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 ZNF138P52744 262 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 MORN5Q5VZ52 161 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 VMO1Q7Z5L0 202 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 C9orf106Q8NAJ2 232 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 PLXNB2O15031 1838 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 FAM90A9PA6NNJ1 464 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 NABP1Q96AH0 204 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 GAGE12BA1L429 117 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 C4orf51C9J302 202 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 FAM90A1Q86YD7 464 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 C1QTNF5Q9BXJ0 243 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 RPUSD1Q9UJJ7 312 aaKnown RBP4.84□□□□□ -1.63
RFX3-204ENST00000382004 SCN7AQ01118 1682 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 IGHV3-16A0A0C4DH30 117 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 C5orf67F2Z3F1 127 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 CHKB-CPT1BH3BT56 60 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 EREGO14944 169 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 LINC01559Q495D7 138 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 MPV17L2Q567V2 206 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 ZNF497Q6ZNH5 498 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 RPRMLQ8N4K4 120 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 C3orf56Q8N813 242 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 MSRB2Q9Y3D2 182 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 SPTBN2O15020 2390 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 RNF222A6NCQ9 220 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 PIP4P2Q8N4L2 257 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 VSIRQ9H7M9 311 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 SCRT2Q9NQ03 307 aa4.84□□□□□ -1.63
RFX3-204ENST00000382004 AMBPP02760 352 aa4.84□□□□□ -1.64
RFX3-204ENST00000382004 SPATA31B1PQ5VZV4 182 aa4.84□□□□□ -1.64
RFX3-204ENST00000382004 EP300Q09472 2414 aaPredicted RBP4.84□□□□□ -1.64
RFX3-204ENST00000382004 DOCK6Q96HP0 2047 aa4.84□□□□□ -1.64
RFX3-204ENST00000382004 SDK2Q58EX2 2172 aa4.84□□□□□ -1.64
RFX3-204ENST00000382004 RS1O15537 224 aa4.84□□□□□ -1.64
RFX3-204ENST00000382004 GAGE1Q13065 139 aa4.84□□□□□ -1.64
RFX3-204ENST00000382004 ZNF837Q96EG3 531 aaPredicted RBP4.84□□□□□ -1.64
RFX3-204ENST00000382004 CASP8AP2Q9UKL3 1982 aa4.84□□□□□ -1.64
RFX3-204ENST00000382004 KLF5Q13887 457 aaPredicted RBP4.83□□□□□ -1.64
RFX3-204ENST00000382004 LY6DQ14210 128 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 C10orf55Q5SWW7 151 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 SPSB3Q6PJ21 355 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 SLC25A48Q6ZT89 311 aaKnown RBP4.83□□□□□ -1.64
RFX3-204ENST00000382004 DEFB105AQ8NG35 78 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 RNF126Q9BV68 326 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 NXPH4O95158 308 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 CD5P06127 495 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 HEPN1Q6WQI6 88 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 LY6G5BQ8NDX9 201 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 UBE2CO00762 179 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 DLEU1O43261 78 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 CXCL1P09341 107 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 FOXG1P55316 489 aaPredicted RBP4.83□□□□□ -1.64
RFX3-204ENST00000382004 TRBV6-7A0A0A0MS04 114 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 TMEM258P61165 79 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 TGFBR3LH3BV60 316 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 EGR2P11161 476 aaPredicted RBP4.83□□□□□ -1.64
RFX3-204ENST00000382004 NBL1P41271 181 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 ZC2HC1BQ5TFG8 222 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 ZNF329Q86UD4 541 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 HIST3H2BBQ8N257 126 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 NUP35Q8NFH5 326 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 CHCHD2Q9Y6H1 151 aaPredicted RBP4.83□□□□□ -1.64
RFX3-204ENST00000382004 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.83□□□□□ -1.64
RFX3-204ENST00000382004 CRLF1O75462 422 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 C1QTNF4Q9BXJ3 329 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 DYSFO75923 2080 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 TINCRA0A1B0GVN0 87 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 KNCNA6PVL3 124 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 GREM1O60565 184 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 IGHG4P01861 327 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 BRD3OSQ6XYD6 125 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 SMIM2Q9BVW6 85 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 WFDC1Q9HC57 220 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 UBE2V1Q13404 147 aa4.83□□□□□ -1.64
RFX3-204ENST00000382004 DOCK8Q8NF50 2099 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 GAGE12JA6NER3 117 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 C22orf46C9J442 243 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 DAD1P61803 113 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 GAGE4Q13068 117 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 GAGE5Q13069 117 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 GAGE6Q13070 117 aa4.82□□□□□ -1.64
RFX3-204ENST00000382004 LINC00477Q96M19 166 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms