RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 ADIPOQQ15848 244 aa14.03□□□□□ -0.16
SGCB-201ENST00000381431 Q6AWC8 147 aa14.03□□□□□ -0.16
SGCB-201ENST00000381431 LCN12Q6JVE5 192 aa14.03□□□□□ -0.16
SGCB-201ENST00000381431 TMEM167AQ8TBQ9 72 aa14.03□□□□□ -0.16
SGCB-201ENST00000381431 H0YJW9 148 aa14.02□□□□□ -0.16
SGCB-201ENST00000381431 NIT1Q86X76 327 aa14.02□□□□□ -0.16
SGCB-201ENST00000381431 FBLN7Q53RD9 439 aa14.02□□□□□ -0.16
SGCB-201ENST00000381431 Q6ZS92 163 aa14.02□□□□□ -0.17
SGCB-201ENST00000381431 IGHV1-3A0A0C4DH29 117 aa14.01□□□□□ -0.17
SGCB-201ENST00000381431 TGFAP01135 160 aa14.01□□□□□ -0.17
SGCB-201ENST00000381431 SLC25A48Q6ZT89 311 aaKnown RBP14.01□□□□□ -0.17
SGCB-201ENST00000381431 THBDP07204 575 aa14.01□□□□□ -0.17
SGCB-201ENST00000381431 ASIPP42127 132 aa14.01□□□□□ -0.17
SGCB-201ENST00000381431 RPL15P61313 204 aaKnown RBP14.01□□□□□ -0.17
SGCB-201ENST00000381431 AMMECR1LQ6DCA0 310 aa14.01□□□□□ -0.17
SGCB-201ENST00000381431 PIEZO1Q92508 2521 aa14.01□□□□□ -0.17
SGCB-201ENST00000381431 CCDC168Q8NDH2 2452 aa14.01□□□□□ -0.17
SGCB-201ENST00000381431 MYO9AB2RTY4 2548 aa14.01□□□□□ -0.17
SGCB-201ENST00000381431 TNCP24821 2201 aa14□□□□□ -0.17
SGCB-201ENST00000381431 A0A1B0GUS0 222 aa14□□□□□ -0.17
SGCB-201ENST00000381431 DUX5Q96PT3 197 aa14□□□□□ -0.17
SGCB-201ENST00000381431 SCGB3A1Q96QR1 104 aa14□□□□□ -0.17
SGCB-201ENST00000381431 IGKV3OR2-268A0A0C4DH90 116 aa14□□□□□ -0.17
SGCB-201ENST00000381431 RNASE2P10153 161 aaKnown RBP14□□□□□ -0.17
SGCB-201ENST00000381431 LGALS3P17931 250 aaKnown RBP14□□□□□ -0.17
SGCB-201ENST00000381431 TSPOP30536 169 aa14□□□□□ -0.17
SGCB-201ENST00000381431 DUX4L9Q6RFH8 374 aaPredicted RBP14□□□□□ -0.17
SGCB-201ENST00000381431 TRAV9-2A0A087WT02 112 aa13.99□□□□□ -0.17
SGCB-201ENST00000381431 PEF1Q9UBV8 284 aaKnown RBP13.99□□□□□ -0.17
SGCB-201ENST00000381431 A0A0G2JLM5 398 aa13.99□□□□□ -0.17
SGCB-201ENST00000381431 PCP4P48539 62 aa13.99□□□□□ -0.17
SGCB-201ENST00000381431 TNFRSF14Q92956 283 aa13.99□□□□□ -0.17
SGCB-201ENST00000381431 SLC25A39Q9BZJ4 359 aaPredicted RBP13.99□□□□□ -0.17
SGCB-201ENST00000381431 IGKV2-40A0A087WW87 121 aaPredicted RBP13.99□□□□□ -0.17
SGCB-201ENST00000381431 PSMB11A5LHX3 300 aa13.99□□□□□ -0.17
SGCB-201ENST00000381431 IGKV2D-40P01614 121 aaPredicted RBP13.99□□□□□ -0.17
SGCB-201ENST00000381431 TCRAP04437 139 aa13.99□□□□□ -0.17
SGCB-201ENST00000381431 RNASE4P34096 147 aaKnown RBP13.99□□□□□ -0.17
SGCB-201ENST00000381431 BEX4Q9NWD9 120 aaPredicted RBP13.99□□□□□ -0.17
SGCB-201ENST00000381431 TMEM219Q86XT9 240 aa13.98□□□□□ -0.17
SGCB-201ENST00000381431 ASCL2Q99929 193 aa13.98□□□□□ -0.17
SGCB-201ENST00000381431 ATP5LO75964 103 aa13.98□□□□□ -0.17
SGCB-201ENST00000381431 EVI2AP22794 236 aa13.98□□□□□ -0.17
SGCB-201ENST00000381431 LMO1P25800 156 aa13.98□□□□□ -0.17
SGCB-201ENST00000381431 CACNG7P62955 275 aa13.98□□□□□ -0.17
SGCB-201ENST00000381431 RAX2Q96IS3 184 aa13.98□□□□□ -0.17
SGCB-201ENST00000381431 NCOR2Q9Y618 2525 aa13.98□□□□□ -0.17
SGCB-201ENST00000381431 A0A1B0GWJ7 208 aa13.98□□□□□ -0.17
SGCB-201ENST00000381431 IL15RAQ13261 267 aa13.98□□□□□ -0.17
SGCB-201ENST00000381431 TTC9CQ8N5M4 171 aa13.98□□□□□ -0.17
SGCB-201ENST00000381431 SMIM12Q96EX1 92 aa13.98□□□□□ -0.17
SGCB-201ENST00000381431 ZNF256Q9Y2P7 627 aaPredicted RBP13.98□□□□□ -0.17
SGCB-201ENST00000381431 A0A1B0GW15 77 aa13.97□□□□□ -0.17
SGCB-201ENST00000381431 SRD5A1P18405 259 aa13.97□□□□□ -0.17
SGCB-201ENST00000381431 LEPP41159 167 aa13.97□□□□□ -0.17
SGCB-201ENST00000381431 ZNF726P1Q15940 193 aa13.97□□□□□ -0.17
SGCB-201ENST00000381431 RRN3P1Q2M238 152 aa13.97□□□□□ -0.17
SGCB-201ENST00000381431 C15orf32Q32M92 178 aa13.97□□□□□ -0.17
SGCB-201ENST00000381431 WFDC12Q8WWY7 111 aa13.97□□□□□ -0.17
SGCB-201ENST00000381431 SIGLEC9Q9Y336 463 aa13.97□□□□□ -0.17
SGCB-201ENST00000381431 OTOGLQ3ZCN5 2332 aa13.97□□□□□ -0.17
SGCB-201ENST00000381431 IGLV3-1P01715 115 aa13.97□□□□□ -0.17
SGCB-201ENST00000381431 IGFL4Q6B9Z1 124 aa13.97□□□□□ -0.17
SGCB-201ENST00000381431 DMRTC2Q8IXT2 367 aaPredicted RBP13.97□□□□□ -0.17
SGCB-201ENST00000381431 A6NNC1 897 aa13.97□□□□□ -0.17
SGCB-201ENST00000381431 NDUFA3O95167 84 aa13.97□□□□□ -0.17
SGCB-201ENST00000381431 ZNF138P52744 262 aa13.97□□□□□ -0.17
SGCB-201ENST00000381431 C19orf54Q5BKX5 351 aa13.97□□□□□ -0.17
SGCB-201ENST00000381431 OR10J3Q5JRS4 329 aa13.97□□□□□ -0.17
SGCB-201ENST00000381431 TRAV40A0A0B4J280 105 aa13.96□□□□□ -0.17
SGCB-201ENST00000381431 NCR2O95944 276 aa13.96□□□□□ -0.17
SGCB-201ENST00000381431 PFN1P07737 140 aaKnown RBP13.96□□□□□ -0.17
SGCB-201ENST00000381431 SMIM13P0DJ93 91 aa13.96□□□□□ -0.17
SGCB-201ENST00000381431 COL8A2P25067 703 aa13.96□□□□□ -0.17
SGCB-201ENST00000381431 ERVK11-1P61568 191 aa13.96□□□□□ -0.17
SGCB-201ENST00000381431 ACTL10Q5JWF8 245 aa13.96□□□□□ -0.17
SGCB-201ENST00000381431 Q8TAT8 98 aa13.96□□□□□ -0.17
SGCB-201ENST00000381431 FXYD7P58549 80 aa13.96□□□□□ -0.18
SGCB-201ENST00000381431 NUP35Q8NFH5 326 aa13.96□□□□□ -0.18
SGCB-201ENST00000381431 COX6CP09669 75 aa13.95□□□□□ -0.18
SGCB-201ENST00000381431 SFTA2Q6UW10 78 aa13.95□□□□□ -0.18
SGCB-201ENST00000381431 ZNF664Q8N3J9 261 aa13.95□□□□□ -0.18
SGCB-201ENST00000381431 GEMIN7Q9H840 131 aaKnown RBP13.95□□□□□ -0.18
SGCB-201ENST00000381431 JKAMPQ9P055 326 aa13.95□□□□□ -0.18
SGCB-201ENST00000381431 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.95□□□□□ -0.18
SGCB-201ENST00000381431 TECTAO75443 2155 aa13.95□□□□□ -0.18
SGCB-201ENST00000381431 NDUFS6O75380 124 aaKnown RBP13.95□□□□□ -0.18
SGCB-201ENST00000381431 TNFSF13O75888 250 aa13.95□□□□□ -0.18
SGCB-201ENST00000381431 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.95□□□□□ -0.18
SGCB-201ENST00000381431 PRR30Q53SZ7 412 aaPredicted RBP13.95□□□□□ -0.18
SGCB-201ENST00000381431 TLN1Q9Y490 2541 aaKnown RBP13.95□□□□□ -0.18
SGCB-201ENST00000381431 A0A1W2PPI3 338 aa13.94□□□□□ -0.18
SGCB-201ENST00000381431 SMAD7O15105 426 aaKnown RBP13.94□□□□□ -0.18
SGCB-201ENST00000381431 HBDP02042 147 aa13.94□□□□□ -0.18
SGCB-201ENST00000381431 HAPLN4Q86UW8 402 aa13.94□□□□□ -0.18
SGCB-201ENST00000381431 TRGV9Q99603 122 aa13.94□□□□□ -0.18
SGCB-201ENST00000381431 SLC50A1Q9BRV3 221 aa13.94□□□□□ -0.18
SGCB-201ENST00000381431 MCRIP2Q9BUT9 160 aaKnown RBP13.94□□□□□ -0.18
SGCB-201ENST00000381431 IGF2RP11717 2491 aa13.94□□□□□ -0.18
SGCB-201ENST00000381431 APOMO95445 188 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms