RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 BUB3O43684 328 aa9.45□□□□□ -0.9
RPAIN-202ENST00000381208 AKR1C4P17516 323 aa9.45□□□□□ -0.9
RPAIN-202ENST00000381208 PSMG4Q5JS54 123 aa9.45□□□□□ -0.9
RPAIN-202ENST00000381208 SIGLEC15Q6ZMC9 328 aa9.45□□□□□ -0.9
RPAIN-202ENST00000381208 ARL6IP6Q8N6S5 226 aa9.45□□□□□ -0.9
RPAIN-202ENST00000381208 Q8NAQ8 132 aa9.45□□□□□ -0.9
RPAIN-202ENST00000381208 TMEM170AQ8WVE7 144 aa9.45□□□□□ -0.9
RPAIN-202ENST00000381208 SLC35E1Q96K37 410 aa9.45□□□□□ -0.9
RPAIN-202ENST00000381208 RAB40CQ96S21 281 aa9.45□□□□□ -0.9
RPAIN-202ENST00000381208 MARVELD1Q9BSK0 173 aa9.45□□□□□ -0.9
RPAIN-202ENST00000381208 KNCNA6PVL3 124 aa9.44□□□□□ -0.9
RPAIN-202ENST00000381208 FAM90A26D6RGX4 464 aa9.44□□□□□ -0.9
RPAIN-202ENST00000381208 GIG44P09565 113 aaPredicted RBP9.44□□□□□ -0.9
RPAIN-202ENST00000381208 PSG1P11464 419 aa9.44□□□□□ -0.9
RPAIN-202ENST00000381208 SLC25A6P12236 298 aa9.44□□□□□ -0.9
RPAIN-202ENST00000381208 RAB11AP62491 216 aa9.44□□□□□ -0.9
RPAIN-202ENST00000381208 USF2Q15853 346 aaPredicted RBP9.44□□□□□ -0.9
RPAIN-202ENST00000381208 SAMD13Q5VXD3 122 aa9.44□□□□□ -0.9
RPAIN-202ENST00000381208 OR1S1Q8NH92 325 aa9.44□□□□□ -0.9
RPAIN-202ENST00000381208 IGHV4-28A0A0C4DH34 117 aa9.43□□□□□ -0.9
RPAIN-202ENST00000381208 ZFP92A6NM28 416 aa9.43□□□□□ -0.9
RPAIN-202ENST00000381208 BOLA2-SMG1P6H3BVE0 249 aa9.43□□□□□ -0.9
RPAIN-202ENST00000381208 MED6O75586 246 aa9.43□□□□□ -0.9
RPAIN-202ENST00000381208 CFDP00746 253 aaPredicted RBP9.43□□□□□ -0.9
RPAIN-202ENST00000381208 NKX2-1P43699 371 aaPredicted RBP9.43□□□□□ -0.9
RPAIN-202ENST00000381208 SUPT4H1P63272 117 aaKnown RBP9.43□□□□□ -0.9
RPAIN-202ENST00000381208 RPP30P78346 268 aaKnown RBP9.43□□□□□ -0.9
RPAIN-202ENST00000381208 TMEM128Q5BJH2 165 aa9.43□□□□□ -0.9
RPAIN-202ENST00000381208 C1orf194Q5T5A4 169 aa9.43□□□□□ -0.9
RPAIN-202ENST00000381208 LYZL2Q7Z4W2 148 aa9.43□□□□□ -0.9
RPAIN-202ENST00000381208 RNF125Q96EQ8 232 aa9.43□□□□□ -0.9
RPAIN-202ENST00000381208 SLC25A21Q9BQT8 299 aaPredicted RBP9.43□□□□□ -0.9
RPAIN-202ENST00000381208 KRTAP4-7Q9BYR0 210 aa9.43□□□□□ -0.9
RPAIN-202ENST00000381208 RBKSQ9H477 322 aa9.43□□□□□ -0.9
RPAIN-202ENST00000381208 AGRNO00468 2067 aa9.42□□□□□ -0.9
RPAIN-202ENST00000381208 TRAV10A0A0B4J240 114 aa9.42□□□□□ -0.9
RPAIN-202ENST00000381208 SNRPGP15A8MWD9 76 aa9.42□□□□□ -0.9
RPAIN-202ENST00000381208 INMT-MINDY4F8WBC2 141 aa9.42□□□□□ -0.9
RPAIN-202ENST00000381208 DEFB4AO15263 64 aa9.42□□□□□ -0.9
RPAIN-202ENST00000381208 CCNKO75909 580 aa9.42□□□□□ -0.9
RPAIN-202ENST00000381208 NXPH3O95157 252 aa9.42□□□□□ -0.9
RPAIN-202ENST00000381208 C4BPBP20851 252 aa9.42□□□□□ -0.9
RPAIN-202ENST00000381208 S100A7P31151 101 aa9.42□□□□□ -0.9
RPAIN-202ENST00000381208 ID1P41134 155 aa9.42□□□□□ -0.9
RPAIN-202ENST00000381208 LRTM2Q8N967 370 aa9.42□□□□□ -0.9
RPAIN-202ENST00000381208 CIB3Q96Q77 187 aaPredicted RBP9.42□□□□□ -0.9
RPAIN-202ENST00000381208 RBMY1A1P0DJD3 496 aaKnown RBP9.41□□□□□ -0.9
RPAIN-202ENST00000381208 RBMY1CP0DJD4 496 aa9.41□□□□□ -0.9
RPAIN-202ENST00000381208 RBMY1FQ15415 496 aaKnown RBP9.41□□□□□ -0.9
RPAIN-202ENST00000381208 SPATA31B1PQ5VZV4 182 aa9.41□□□□□ -0.9
RPAIN-202ENST00000381208 CSNK1G2-AS1Q8NCQ2 148 aa9.41□□□□□ -0.9
RPAIN-202ENST00000381208 PBDC1Q9BVG4 233 aa9.41□□□□□ -0.9
RPAIN-202ENST00000381208 TMED3Q9Y3Q3 217 aa9.41□□□□□ -0.9
RPAIN-202ENST00000381208 X6R8D5 127 aa9.41□□□□□ -0.9
RPAIN-202ENST00000381208 IGLL5B9A064 214 aa9.4□□□□□ -0.9
RPAIN-202ENST00000381208 H3BMM0 161 aa9.4□□□□□ -0.9
RPAIN-202ENST00000381208 PITX3O75364 302 aa9.4□□□□□ -0.9
RPAIN-202ENST00000381208 HLA-DRB4P13762 266 aa9.4□□□□□ -0.9
RPAIN-202ENST00000381208 HLA-DMBP28068 263 aa9.4□□□□□ -0.9
RPAIN-202ENST00000381208 GAMTQ14353 236 aa9.4□□□□□ -0.9
RPAIN-202ENST00000381208 GGNBP1Q5YKI7 109 aa9.4□□□□□ -0.9
RPAIN-202ENST00000381208 TMED4Q7Z7H5 227 aa9.4□□□□□ -0.9
RPAIN-202ENST00000381208 RPP25LQ8N5L8 163 aaKnown RBP9.4□□□□□ -0.9
RPAIN-202ENST00000381208 CLUHP3Q96NS8 147 aa9.4□□□□□ -0.9
RPAIN-202ENST00000381208 TRGV9Q99603 122 aa9.4□□□□□ -0.9
RPAIN-202ENST00000381208 PRR13Q9NZ81 148 aa9.4□□□□□ -0.9
RPAIN-202ENST00000381208 HLA-DRB4X5D2U9 266 aa9.4□□□□□ -0.9
RPAIN-202ENST00000381208 TMEM189A5PLL7 270 aa9.39□□□□□ -0.91
RPAIN-202ENST00000381208 SMIM9A6NGZ8 99 aa9.39□□□□□ -0.91
RPAIN-202ENST00000381208 PRAF2O60831 178 aa9.39□□□□□ -0.91
RPAIN-202ENST00000381208 TCRBP04435 133 aa9.39□□□□□ -0.91
RPAIN-202ENST00000381208 BTCP35070 178 aa9.39□□□□□ -0.91
RPAIN-202ENST00000381208 PSMB3P49720 205 aa9.39□□□□□ -0.91
RPAIN-202ENST00000381208 FOXI2Q6ZQN5 318 aa9.39□□□□□ -0.91
RPAIN-202ENST00000381208 NEU1Q99519 415 aa9.39□□□□□ -0.91
RPAIN-202ENST00000381208 RNF126Q9BV68 326 aa9.39□□□□□ -0.91
RPAIN-202ENST00000381208 SLC45A2Q9UMX9 530 aa9.39□□□□□ -0.91
RPAIN-202ENST00000381208 ALG5Q9Y673 324 aa9.39□□□□□ -0.91
RPAIN-202ENST00000381208 TEX48A0A1B0GUV7 120 aa9.38□□□□□ -0.91
RPAIN-202ENST00000381208 C7orf66A4D0T2 115 aa9.38□□□□□ -0.91
RPAIN-202ENST00000381208 DEDDO75618 318 aa9.38□□□□□ -0.91
RPAIN-202ENST00000381208 H2AFB2P0C5Z0 115 aa9.38□□□□□ -0.91
RPAIN-202ENST00000381208 MEOX2P50222 304 aa9.38□□□□□ -0.91
RPAIN-202ENST00000381208 UBE2MP61081 183 aaKnown RBP9.38□□□□□ -0.91
RPAIN-202ENST00000381208 LYZP61626 148 aa9.38□□□□□ -0.91
RPAIN-202ENST00000381208 COQ8AQ8NI60 647 aa9.38□□□□□ -0.91
RPAIN-202ENST00000381208 NUDT15Q9NV35 164 aa9.38□□□□□ -0.91
RPAIN-202ENST00000381208 CLEC5AQ9NY25 188 aa9.38□□□□□ -0.91
RPAIN-202ENST00000381208 APLNQ9ULZ1 77 aa9.38□□□□□ -0.91
RPAIN-202ENST00000381208 IGKV1D-37A0A075B6S9 117 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 ELOA3CA0A087WX78 387 aaPredicted RBP9.37□□□□□ -0.91
RPAIN-202ENST00000381208 ISLRO14498 428 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 SFT2D2O95562 160 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 RRAS2P62070 204 aaPredicted RBP9.37□□□□□ -0.91
RPAIN-202ENST00000381208 ZNF90Q03938 601 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 Q6ZTC4 211 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 OR8I2Q8N0Y5 310 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 THAP8Q8NA92 274 aa9.37□□□□□ -0.91
RPAIN-202ENST00000381208 SAV1Q9H4B6 383 aaPredicted RBP9.37□□□□□ -0.91
RPAIN-202ENST00000381208 XCL2Q9UBD3 114 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms