RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 SMCO3A2RU48 225 aa14.6□□□□□ -0.07
GTF3A-201ENST00000381140 ZNF785A8K8V0 405 aa14.6□□□□□ -0.07
GTF3A-201ENST00000381140 RHPN1-AS1Q9BWJ2 59 aa14.6□□□□□ -0.07
GTF3A-201ENST00000381140 LSM4Q9Y4Z0 139 aaKnown RBP14.6□□□□□ -0.07
GTF3A-201ENST00000381140 PRKDCP78527 4128 aaKnown RBP14.6□□□□□ -0.07
GTF3A-201ENST00000381140 CHEK1O14757 476 aa14.6□□□□□ -0.07
GTF3A-201ENST00000381140 RD3LP0DJH9 198 aa14.6□□□□□ -0.07
GTF3A-201ENST00000381140 YPEL3P61236 119 aaPredicted RBP14.6□□□□□ -0.07
GTF3A-201ENST00000381140 AKR1C1Q04828 323 aa14.6□□□□□ -0.07
GTF3A-201ENST00000381140 EIF5AL1Q6IS14 154 aaKnown RBP14.6□□□□□ -0.07
GTF3A-201ENST00000381140 WDR61Q9GZS3 305 aaKnown RBP14.6□□□□□ -0.07
GTF3A-201ENST00000381140 SMAD5-AS1Q9Y6J3 95 aa14.6□□□□□ -0.07
GTF3A-201ENST00000381140 UBE2L5PA0A1B0GUS4 154 aa14.59□□□□□ -0.07
GTF3A-201ENST00000381140 TOMM40O96008 361 aa14.59□□□□□ -0.07
GTF3A-201ENST00000381140 APOHP02749 345 aaPredicted RBP14.59□□□□□ -0.07
GTF3A-201ENST00000381140 NPPCP23582 126 aa14.59□□□□□ -0.07
GTF3A-201ENST00000381140 CD81P60033 236 aa14.59□□□□□ -0.07
GTF3A-201ENST00000381140 SCGB1C1Q8TD33 95 aa14.59□□□□□ -0.07
GTF3A-201ENST00000381140 GNPNAT1Q96EK6 184 aaPredicted RBP14.59□□□□□ -0.07
GTF3A-201ENST00000381140 METTL26Q96S19 204 aa14.59□□□□□ -0.07
GTF3A-201ENST00000381140 RNF2Q99496 336 aa14.59□□□□□ -0.07
GTF3A-201ENST00000381140 UBQLN2Q9UHD9 624 aa14.59□□□□□ -0.07
GTF3A-201ENST00000381140 WDR83OSQ9Y284 106 aa14.59□□□□□ -0.07
GTF3A-201ENST00000381140 IGKV3-7A0A075B6H7 116 aa14.58□□□□□ -0.08
GTF3A-201ENST00000381140 IL4P05112 153 aa14.58□□□□□ -0.08
GTF3A-201ENST00000381140 SEC11BP0C7V7 166 aa14.58□□□□□ -0.08
GTF3A-201ENST00000381140 SPP1P10451 314 aa14.58□□□□□ -0.08
GTF3A-201ENST00000381140 ZNF90Q03938 601 aa14.58□□□□□ -0.08
GTF3A-201ENST00000381140 ALKAL2Q6UX46 152 aa14.58□□□□□ -0.08
GTF3A-201ENST00000381140 HSD17B11Q8NBQ5 300 aa14.58□□□□□ -0.08
GTF3A-201ENST00000381140 IGKV1D-37A0A075B6S9 117 aa14.57□□□□□ -0.08
GTF3A-201ENST00000381140 MPDU1O75352 247 aa14.57□□□□□ -0.08
GTF3A-201ENST00000381140 CD7P09564 240 aa14.57□□□□□ -0.08
GTF3A-201ENST00000381140 PSG1P11464 419 aa14.57□□□□□ -0.08
GTF3A-201ENST00000381140 ATP6V0CP27449 155 aa14.57□□□□□ -0.08
GTF3A-201ENST00000381140 BMI1P35226 326 aa14.57□□□□□ -0.08
GTF3A-201ENST00000381140 Q8N1Y9 231 aa14.57□□□□□ -0.08
GTF3A-201ENST00000381140 PBDC1Q9BVG4 233 aa14.57□□□□□ -0.08
GTF3A-201ENST00000381140 NPVFQ9HCQ7 196 aa14.57□□□□□ -0.08
GTF3A-201ENST00000381140 TRAV25A0A0B4J276 109 aa14.56□□□□□ -0.08
GTF3A-201ENST00000381140 FABP1P07148 127 aa14.56□□□□□ -0.08
GTF3A-201ENST00000381140 OR51G1Q8NGK1 321 aa14.56□□□□□ -0.08
GTF3A-201ENST00000381140 TMED6Q8WW62 240 aa14.56□□□□□ -0.08
GTF3A-201ENST00000381140 NARS2Q96I59 477 aaKnown RBP14.56□□□□□ -0.08
GTF3A-201ENST00000381140 PSMG3Q9BT73 122 aaPredicted RBP14.56□□□□□ -0.08
GTF3A-201ENST00000381140 TIMM9Q9Y5J7 89 aa14.56□□□□□ -0.08
GTF3A-201ENST00000381140 IGKV1OR2-108A0A075B7D4 117 aa14.55□□□□□ -0.08
GTF3A-201ENST00000381140 FGF7P21781 194 aa14.55□□□□□ -0.08
GTF3A-201ENST00000381140 TFPI2P48307 235 aa14.55□□□□□ -0.08
GTF3A-201ENST00000381140 RPL11P62913 178 aaKnown RBP14.55□□□□□ -0.08
GTF3A-201ENST00000381140 USF2Q15853 346 aaPredicted RBP14.55□□□□□ -0.08
GTF3A-201ENST00000381140 TCF24Q7RTU0 167 aa14.55□□□□□ -0.08
GTF3A-201ENST00000381140 TMEM144Q7Z5S9 345 aa14.55□□□□□ -0.08
GTF3A-201ENST00000381140 THAP8Q8NA92 274 aa14.55□□□□□ -0.08
GTF3A-201ENST00000381140 TRGV9Q99603 122 aa14.55□□□□□ -0.08
GTF3A-201ENST00000381140 SH3BGRL3Q9H299 93 aa14.55□□□□□ -0.08
GTF3A-201ENST00000381140 SLC25A32Q9H2D1 315 aa14.55□□□□□ -0.08
GTF3A-201ENST00000381140 TMEM231Q9H6L2 316 aa14.55□□□□□ -0.08
GTF3A-201ENST00000381140 TGP01266 2768 aa14.54□□□□□ -0.08
GTF3A-201ENST00000381140 LYZP61626 148 aa14.54□□□□□ -0.08
GTF3A-201ENST00000381140 GBGT1Q8N5D6 347 aa14.54□□□□□ -0.08
GTF3A-201ENST00000381140 RNF125Q96EQ8 232 aa14.54□□□□□ -0.08
GTF3A-201ENST00000381140 ASCL2Q99929 193 aa14.54□□□□□ -0.08
GTF3A-201ENST00000381140 SPAG8Q99932 426 aaPredicted RBP14.54□□□□□ -0.08
GTF3A-201ENST00000381140 WFDC10AQ9H1F0 79 aa14.54□□□□□ -0.08
GTF3A-201ENST00000381140 VSIRQ9H7M9 311 aa14.54□□□□□ -0.08
GTF3A-201ENST00000381140 A0A1W2PS18 150 aa14.53□□□□□ -0.08
GTF3A-201ENST00000381140 TSPAN4O14817 238 aa14.53□□□□□ -0.08
GTF3A-201ENST00000381140 IGHV4-30-4P0DP06 118 aa14.53□□□□□ -0.08
GTF3A-201ENST00000381140 CRYBB3P26998 211 aa14.53□□□□□ -0.08
GTF3A-201ENST00000381140 TEPPQ6URK8 271 aa14.53□□□□□ -0.08
GTF3A-201ENST00000381140 GRAMD2BQ96HH9 432 aa14.53□□□□□ -0.08
GTF3A-201ENST00000381140 RSG1Q9BU20 258 aa14.53□□□□□ -0.08
GTF3A-201ENST00000381140 NPCDR1Q9BY65 106 aa14.53□□□□□ -0.08
GTF3A-201ENST00000381140 TUBA4BQ9H853 241 aa14.53□□□□□ -0.08
GTF3A-201ENST00000381140 RABAC1Q9UI14 185 aa14.53□□□□□ -0.08
GTF3A-201ENST00000381140 FRMD6-AS1P0C7T7 363 aa14.52□□□□□ -0.08
GTF3A-201ENST00000381140 SULT1A2P50226 295 aa14.52□□□□□ -0.08
GTF3A-201ENST00000381140 WFDC3Q8IUB2 231 aa14.52□□□□□ -0.08
GTF3A-201ENST00000381140 OR2G3Q8NGZ4 309 aa14.52□□□□□ -0.08
GTF3A-201ENST00000381140 B9D2Q9BPU9 175 aa14.52□□□□□ -0.08
GTF3A-201ENST00000381140 OR11H12B2RN74 326 aa14.51□□□□□ -0.09
GTF3A-201ENST00000381140 C17orf112F2Z3M2 114 aa14.51□□□□□ -0.09
GTF3A-201ENST00000381140 GATA2P23769 480 aaPredicted RBP14.51□□□□□ -0.09
GTF3A-201ENST00000381140 SERF2P84101 59 aa14.51□□□□□ -0.09
GTF3A-201ENST00000381140 FAM74A1Q5RGS3 127 aa14.51□□□□□ -0.09
GTF3A-201ENST00000381140 DEFB125Q8N687 156 aa14.51□□□□□ -0.09
GTF3A-201ENST00000381140 LRRC20Q8TCA0 184 aa14.51□□□□□ -0.09
GTF3A-201ENST00000381140 RNF141Q8WVD5 230 aa14.51□□□□□ -0.09
GTF3A-201ENST00000381140 MGST2Q99735 147 aa14.51□□□□□ -0.09
GTF3A-201ENST00000381140 KCNIP2Q9NS61 270 aa14.51□□□□□ -0.09
GTF3A-201ENST00000381140 PLA2G2EQ9NZK7 142 aa14.51□□□□□ -0.09
GTF3A-201ENST00000381140 OR4C46A6NHA9 309 aa14.5□□□□□ -0.09
GTF3A-201ENST00000381140 UMAD1C9J7I0 102 aa14.5□□□□□ -0.09
GTF3A-201ENST00000381140 RAB5CP51148 216 aa14.5□□□□□ -0.09
GTF3A-201ENST00000381140 RAB31Q13636 194 aa14.5□□□□□ -0.09
GTF3A-201ENST00000381140 FAM90A2PQ658T7 463 aa14.5□□□□□ -0.09
GTF3A-201ENST00000381140 ZNF709Q8N972 641 aa14.5□□□□□ -0.09
GTF3A-201ENST00000381140 GGTLC1Q9BX51 225 aa14.5□□□□□ -0.09
GTF3A-201ENST00000381140 DNASE2O00115 360 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms