RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 SCN1AP35498 2009 aa8.94□□□□□ -0.98
CLCN4-202ENST00000380833 A0A1B0GX51 115 aa8.94□□□□□ -0.98
CLCN4-202ENST00000380833 ARHGEF17Q96PE2 2063 aaPredicted RBP8.94□□□□□ -0.98
CLCN4-202ENST00000380833 TRBV6-7A0A0A0MS04 114 aa8.94□□□□□ -0.98
CLCN4-202ENST00000380833 NBEAP1P0C6P0 100 aa8.94□□□□□ -0.98
CLCN4-202ENST00000380833 NTN5Q8WTR8 489 aaPredicted RBP8.94□□□□□ -0.98
CLCN4-202ENST00000380833 ZNF146Q15072 292 aa8.94□□□□□ -0.98
CLCN4-202ENST00000380833 CSRP2Q16527 193 aa8.94□□□□□ -0.98
CLCN4-202ENST00000380833 ZNF625Q96I27 306 aaPredicted RBP8.94□□□□□ -0.98
CLCN4-202ENST00000380833 UBE2E2Q96LR5 201 aa8.94□□□□□ -0.98
CLCN4-202ENST00000380833 CHCHD5Q9BSY4 110 aa8.94□□□□□ -0.98
CLCN4-202ENST00000380833 EFEMP2O95967 443 aa8.94□□□□□ -0.98
CLCN4-202ENST00000380833 PIKFYVEQ9Y2I7 2098 aa8.94□□□□□ -0.98
CLCN4-202ENST00000380833 IFNL4K9M1U5 179 aa8.94□□□□□ -0.98
CLCN4-202ENST00000380833 CDK2AP2O75956 126 aa8.94□□□□□ -0.98
CLCN4-202ENST00000380833 FAM27BQ5VT28 67 aa8.94□□□□□ -0.98
CLCN4-202ENST00000380833 FAM110DQ8TAY7 271 aaPredicted RBP8.94□□□□□ -0.98
CLCN4-202ENST00000380833 PEMTQ9UBM1 199 aa8.94□□□□□ -0.98
CLCN4-202ENST00000380833 MIR17HGQ75NE6 70 aa8.94□□□□□ -0.98
CLCN4-202ENST00000380833 TMEM190Q8WZ59 177 aa8.94□□□□□ -0.98
CLCN4-202ENST00000380833 TGFBR3LH3BV60 316 aa8.93□□□□□ -0.98
CLCN4-202ENST00000380833 IGKV1-8A0A0C4DH67 115 aa8.93□□□□□ -0.98
CLCN4-202ENST00000380833 CECR9P0C854 216 aa8.93□□□□□ -0.98
CLCN4-202ENST00000380833 NDUFV3P56181 108 aaKnown RBP8.93□□□□□ -0.98
CLCN4-202ENST00000380833 K7ERJ3 54 aa8.93□□□□□ -0.98
CLCN4-202ENST00000380833 CGB7P0DN87 165 aa8.93□□□□□ -0.98
CLCN4-202ENST00000380833 SSC4DQ8WTU2 575 aa8.93□□□□□ -0.98
CLCN4-202ENST00000380833 ZNF319Q9P2F9 582 aa8.93□□□□□ -0.98
CLCN4-202ENST00000380833 CLPSP04118 112 aa8.93□□□□□ -0.98
CLCN4-202ENST00000380833 AMTNQ6UX39 209 aa8.93□□□□□ -0.98
CLCN4-202ENST00000380833 SLC25A48Q6ZT89 311 aaKnown RBP8.93□□□□□ -0.98
CLCN4-202ENST00000380833 COL18A1P39060 1754 aa8.93□□□□□ -0.98
CLCN4-202ENST00000380833 GATA4P43694 442 aa8.93□□□□□ -0.98
CLCN4-202ENST00000380833 SCN7AQ01118 1682 aa8.93□□□□□ -0.98
CLCN4-202ENST00000380833 KLF5Q13887 457 aaPredicted RBP8.93□□□□□ -0.98
CLCN4-202ENST00000380833 NEGR1Q7Z3B1 354 aa8.93□□□□□ -0.98
CLCN4-202ENST00000380833 CARD19Q96LW7 228 aa8.93□□□□□ -0.98
CLCN4-202ENST00000380833 AKAP11Q9UKA4 1901 aa8.92□□□□□ -0.98
CLCN4-202ENST00000380833 FGF6P10767 208 aa8.92□□□□□ -0.98
CLCN4-202ENST00000380833 CFHR3Q02985 330 aa8.92□□□□□ -0.98
CLCN4-202ENST00000380833 FOXI1Q12951 378 aa8.92□□□□□ -0.98
CLCN4-202ENST00000380833 SPACA3Q8IXA5 215 aa8.92□□□□□ -0.98
CLCN4-202ENST00000380833 TNRC6CQ9HCJ0 1690 aaKnown RBP8.92□□□□□ -0.98
CLCN4-202ENST00000380833 ATP6V0E2Q8NHE4 81 aa8.92□□□□□ -0.98
CLCN4-202ENST00000380833 MCRIP2Q9BUT9 160 aaKnown RBP8.92□□□□□ -0.98
CLCN4-202ENST00000380833 A0A1B0GUS0 222 aa8.92□□□□□ -0.98
CLCN4-202ENST00000380833 TMEM14DPA8MWL7 114 aa8.92□□□□□ -0.98
CLCN4-202ENST00000380833 RPL32P62910 135 aaKnown RBP8.92□□□□□ -0.98
CLCN4-202ENST00000380833 TCF19Q9Y242 345 aa8.92□□□□□ -0.98
CLCN4-202ENST00000380833 TEX45Q8NA69 505 aa8.92□□□□□ -0.98
CLCN4-202ENST00000380833 DOCK1Q14185 1865 aa8.92□□□□□ -0.98
CLCN4-202ENST00000380833 DOCK5Q9H7D0 1870 aa8.92□□□□□ -0.98
CLCN4-202ENST00000380833 MYO5AQ9Y4I1 1855 aaKnown RBP8.92□□□□□ -0.98
CLCN4-202ENST00000380833 IQCF6A8MYZ5 107 aa8.92□□□□□ -0.98
CLCN4-202ENST00000380833 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.92□□□□□ -0.98
CLCN4-202ENST00000380833 D6R8Y8 96 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 HLA-DMBP28068 263 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 ZXDCQ2QGD7 858 aaPredicted RBP8.91□□□□□ -0.98
CLCN4-202ENST00000380833 TMEM167AQ8TBQ9 72 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 PFN1P07737 140 aaKnown RBP8.91□□□□□ -0.98
CLCN4-202ENST00000380833 C12orf74Q32Q52 190 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 IL17RELQ6ZVW7 336 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 ZNF329Q86UD4 541 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 C9orf106Q8NAJ2 232 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 OTORQ9NRC9 128 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 LY6HO94772 140 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 NPYP01303 97 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 CD55P08174 381 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 PRSS57Q6UWY2 283 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 Q9H3A6 140 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 SEC61GP60059 68 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 MST1LQ2TV78 715 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 TMEM86BQ8N661 226 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 RNF166Q96A37 237 aaPredicted RBP8.91□□□□□ -0.98
CLCN4-202ENST00000380833 LHFPL6Q9Y693 200 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 MYMXA0A1B0GTQ4 84 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 PYYP10082 97 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 PRSS22Q9GZN4 317 aa8.91□□□□□ -0.98
CLCN4-202ENST00000380833 RPUSD1Q9UJJ7 312 aaKnown RBP8.91□□□□□ -0.98
CLCN4-202ENST00000380833 FOXI2Q6ZQN5 318 aa8.9□□□□□ -0.98
CLCN4-202ENST00000380833 DPM3Q9P2X0 92 aa8.9□□□□□ -0.98
CLCN4-202ENST00000380833 LRRC75A-AS1Q8N1F1 130 aa8.9□□□□□ -0.98
CLCN4-202ENST00000380833 Q96M66 194 aa8.9□□□□□ -0.98
CLCN4-202ENST00000380833 MAST2Q6P0Q8 1798 aa8.9□□□□□ -0.98
CLCN4-202ENST00000380833 C4orf51C9J302 202 aa8.9□□□□□ -0.98
CLCN4-202ENST00000380833 SPTSSBQ8NFR3 76 aa8.9□□□□□ -0.98
CLCN4-202ENST00000380833 MARF1Q9Y4F3 1742 aaKnown RBP8.9□□□□□ -0.98
CLCN4-202ENST00000380833 UQCRQO14949 82 aa8.9□□□□□ -0.99
CLCN4-202ENST00000380833 LEPROTO15243 131 aa8.9□□□□□ -0.99
CLCN4-202ENST00000380833 CCL1P22362 96 aa8.9□□□□□ -0.99
CLCN4-202ENST00000380833 VSIRQ9H7M9 311 aa8.9□□□□□ -0.99
CLCN4-202ENST00000380833 PRO1854Q9UHT4 67 aa8.9□□□□□ -0.99
CLCN4-202ENST00000380833 LAMA4Q16363 1823 aa8.9□□□□□ -0.99
CLCN4-202ENST00000380833 IGKV1D-42A0A075B6H8 117 aa8.9□□□□□ -0.99
CLCN4-202ENST00000380833 SMIM9A6NGZ8 99 aa8.9□□□□□ -0.99
CLCN4-202ENST00000380833 NDUFC2-KCTD14E9PQ53 114 aa8.9□□□□□ -0.99
CLCN4-202ENST00000380833 RNASE2P10153 161 aaKnown RBP8.9□□□□□ -0.99
CLCN4-202ENST00000380833 EGR4Q05215 589 aa8.9□□□□□ -0.99
CLCN4-202ENST00000380833 CXCL5P42830 114 aa8.89□□□□□ -0.99
CLCN4-202ENST00000380833 NDPQ00604 133 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms