RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 TIMM23O14925 209 aa10.39□□□□□ -0.75
DNMT3A-204ENST00000380756 Q0VG73 95 aa10.39□□□□□ -0.75
DNMT3A-204ENST00000380756 EXOC3-AS1Q8N2X6 119 aa10.39□□□□□ -0.75
DNMT3A-204ENST00000380756 FGF23Q9GZV9 251 aaPredicted RBP10.39□□□□□ -0.75
DNMT3A-204ENST00000380756 ATP5G2Q06055 141 aa10.38□□□□□ -0.75
DNMT3A-204ENST00000380756 SRSF6Q13247 344 aaKnown RBP10.38□□□□□ -0.75
DNMT3A-204ENST00000380756 MRPL27Q9P0M9 148 aaKnown RBP10.38□□□□□ -0.75
DNMT3A-204ENST00000380756 CENPFP49454 3210 aa10.38□□□□□ -0.75
DNMT3A-204ENST00000380756 ZNF474Q6S9Z5 364 aaPredicted RBP10.38□□□□□ -0.75
DNMT3A-204ENST00000380756 PRSS33Q8NF86 280 aa10.38□□□□□ -0.75
DNMT3A-204ENST00000380756 TRGV9Q99603 122 aa10.38□□□□□ -0.75
DNMT3A-204ENST00000380756 SCRT1Q9BWW7 348 aa10.38□□□□□ -0.75
DNMT3A-204ENST00000380756 TMEM178BH3BS89 294 aa10.38□□□□□ -0.75
DNMT3A-204ENST00000380756 IGHV1-8P0DP01 117 aa10.38□□□□□ -0.75
DNMT3A-204ENST00000380756 OR5AN1Q8NGI8 311 aa10.38□□□□□ -0.75
DNMT3A-204ENST00000380756 SNHG12Q9BXW3 62 aa10.38□□□□□ -0.75
DNMT3A-204ENST00000380756 FABP5P3A8MUU1 101 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 ATP5LO75964 103 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 SMIM13P0DJ93 91 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 PRB4P10163 310 aaPredicted RBP10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 YPEL3P61236 119 aaPredicted RBP10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 FBLN7Q53RD9 439 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 C20orf144Q9BQM9 153 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 TRAV8-1A0A0A6YYK1 113 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 HIST1H1AQ02539 215 aaPredicted RBP10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 FAM169BQ8N8A8 192 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 ZNRD1Q9P1U0 126 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 H3BVH4 76 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 WNT2P09544 360 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 M0R381 172 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 HBDP02042 147 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 TDGF1P3P51864 188 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 PSMG4Q5JS54 123 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 CDPF1Q6NVV7 123 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 DTX1Q86Y01 620 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 KIR3DL3Q8N743 410 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 FOXC2Q99958 501 aa10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 SLC25A39Q9BZJ4 359 aaPredicted RBP10.37□□□□□ -0.75
DNMT3A-204ENST00000380756 IGHV2-26A0A0B4J1V2 119 aa10.36□□□□□ -0.75
DNMT3A-204ENST00000380756 C2orf16Q68DN1 1984 aa10.36□□□□□ -0.75
DNMT3A-204ENST00000380756 ARFGEF3Q5TH69 2177 aa10.36□□□□□ -0.75
DNMT3A-204ENST00000380756 CACNG7P62955 275 aa10.36□□□□□ -0.75
DNMT3A-204ENST00000380756 CENPVQ7Z7K6 275 aaPredicted RBP10.36□□□□□ -0.75
DNMT3A-204ENST00000380756 TTC9CQ8N5M4 171 aa10.36□□□□□ -0.75
DNMT3A-204ENST00000380756 TSPOP30536 169 aa10.35□□□□□ -0.75
DNMT3A-204ENST00000380756 CDKN1AP38936 164 aa10.35□□□□□ -0.75
DNMT3A-204ENST00000380756 ARHGAP21Q5T5U3 1957 aa10.35□□□□□ -0.75
DNMT3A-204ENST00000380756 TNCP24821 2201 aa10.35□□□□□ -0.75
DNMT3A-204ENST00000380756 A0A1B0GWJ7 208 aa10.35□□□□□ -0.75
DNMT3A-204ENST00000380756 C15orf65H3BRN8 121 aa10.35□□□□□ -0.75
DNMT3A-204ENST00000380756 CLEC2AQ6UVW9 174 aa10.35□□□□□ -0.75
DNMT3A-204ENST00000380756 NEUROG1Q92886 237 aa10.35□□□□□ -0.75
DNMT3A-204ENST00000380756 KIAA1549LQ6ZVL6 1849 aa10.35□□□□□ -0.75
DNMT3A-204ENST00000380756 PLA2G5P39877 138 aa10.35□□□□□ -0.75
DNMT3A-204ENST00000380756 EBLN2Q6P2I7 272 aa10.35□□□□□ -0.75
DNMT3A-204ENST00000380756 NEU4Q8WWR8 484 aaPredicted RBP10.35□□□□□ -0.75
DNMT3A-204ENST00000380756 H3BUT2 72 aa10.35□□□□□ -0.75
DNMT3A-204ENST00000380756 IGHV1-3A0A0C4DH29 117 aa10.34□□□□□ -0.75
DNMT3A-204ENST00000380756 GGTLC3B5MD39 225 aa10.34□□□□□ -0.75
DNMT3A-204ENST00000380756 TRGV3P03979 118 aa10.34□□□□□ -0.75
DNMT3A-204ENST00000380756 LY6EQ16553 131 aa10.34□□□□□ -0.75
DNMT3A-204ENST00000380756 CLEC19AQ6UXS0 136 aa10.34□□□□□ -0.75
DNMT3A-204ENST00000380756 MRPL52Q86TS9 123 aaKnown RBP10.34□□□□□ -0.75
DNMT3A-204ENST00000380756 CSPG4Q6UVK1 2322 aa10.34□□□□□ -0.75
DNMT3A-204ENST00000380756 IFI27L1Q96BM0 104 aa10.34□□□□□ -0.75
DNMT3A-204ENST00000380756 SIGLEC9Q9Y336 463 aa10.34□□□□□ -0.75
DNMT3A-204ENST00000380756 SPCS1Q9Y6A9 102 aa10.34□□□□□ -0.75
DNMT3A-204ENST00000380756 IGHV3OR16-10A0A075B7F0 116 aa10.34□□□□□ -0.75
DNMT3A-204ENST00000380756 NPIPB5A8MRT5 1133 aa10.34□□□□□ -0.75
DNMT3A-204ENST00000380756 PPBPP02775 128 aa10.34□□□□□ -0.75
DNMT3A-204ENST00000380756 ZNF134P52741 427 aa10.34□□□□□ -0.75
DNMT3A-204ENST00000380756 Q6ZWC4 215 aa10.34□□□□□ -0.75
DNMT3A-204ENST00000380756 ASCL2Q99929 193 aa10.34□□□□□ -0.75
DNMT3A-204ENST00000380756 SONP18583 2426 aaKnown RBP10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 ADIPOQQ15848 244 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 KRTAP27-1Q3LI81 207 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 ZNF329Q86UD4 541 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 C18orf32Q8TCD1 76 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 KIR2DL4Q99706 377 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 PYGO2Q9BRQ0 406 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 MS4A6AQ9H2W1 248 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 ANKHD1Q8IWZ3 2542 aaKnown RBP10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 A0A1W2PPI3 338 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 hDV102S1A0JD36 115 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 FAM106AQ4KMX7 169 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 PPIFP30405 207 aaKnown RBP10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 LEPP41159 167 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 KLF17Q5JT82 389 aaPredicted RBP10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 COA6Q5JTJ3 125 aaKnown RBP10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 LDLRAD2Q5SZI1 272 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 C11orf52Q96A22 123 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 SMIM12Q96EX1 92 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 V9GYV3 84 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 SYS1-DBNDD2H3BUS1 97 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 CFHR2P36980 270 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 ZNF138P52744 262 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 MPV17L2Q567V2 206 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 FAM74A4Q5TZK3 123 aa10.33□□□□□ -0.76
DNMT3A-204ENST00000380756 LY6DQ14210 128 aa10.32□□□□□ -0.76
DNMT3A-204ENST00000380756 FAM159AQ6UWV7 190 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms