RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 APOBEC3AP31941 199 aaPredicted RBP9.22□□□□□ -0.93
SMAD9-202ENST00000379826 RELQ04864 619 aaPredicted RBP9.22□□□□□ -0.93
SMAD9-202ENST00000379826 MRPL52Q86TS9 123 aaKnown RBP9.22□□□□□ -0.93
SMAD9-202ENST00000379826 PRELID3AQ96N28 172 aa9.22□□□□□ -0.93
SMAD9-202ENST00000379826 WDR87Q6ZQQ6 2873 aa9.22□□□□□ -0.93
SMAD9-202ENST00000379826 PPIAL4CA0A0B4J2A2 164 aa9.22□□□□□ -0.93
SMAD9-202ENST00000379826 PPIAL4GP0DN37 164 aa9.22□□□□□ -0.93
SMAD9-202ENST00000379826 WISP2O76076 250 aa9.22□□□□□ -0.93
SMAD9-202ENST00000379826 LGALS7P47929 136 aa9.22□□□□□ -0.93
SMAD9-202ENST00000379826 LY6EQ16553 131 aa9.22□□□□□ -0.93
SMAD9-202ENST00000379826 SLC25A48Q6ZT89 311 aaKnown RBP9.21□□□□□ -0.93
SMAD9-202ENST00000379826 NEU4Q8WWR8 484 aaPredicted RBP9.21□□□□□ -0.93
SMAD9-202ENST00000379826 MRPL27Q9P0M9 148 aaKnown RBP9.21□□□□□ -0.93
SMAD9-202ENST00000379826 IGHV1-69-2A0A0G2JMI3 117 aa9.21□□□□□ -0.93
SMAD9-202ENST00000379826 C17orf100A8MU93 164 aa9.21□□□□□ -0.93
SMAD9-202ENST00000379826 LYPD2Q6UXB3 125 aa9.21□□□□□ -0.93
SMAD9-202ENST00000379826 LSM4Q9Y4Z0 139 aaKnown RBP9.21□□□□□ -0.93
SMAD9-202ENST00000379826 COX11Q9Y6N1 276 aa9.21□□□□□ -0.93
SMAD9-202ENST00000379826 A0A1B0GWJ7 208 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 CNTFRP26992 372 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 RIPPLY3P57055 190 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 PRR20EP86478 221 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 PRR20CP86479 221 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 PRR20DP86480 221 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 PRR20BP86481 221 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 PRR20AP86496 221 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 UBE2V1Q13404 147 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 OTORQ9NRC9 128 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 YLPM1P49750 1951 aaKnown RBP9.21□□□□□ -0.94
SMAD9-202ENST00000379826 TPSG1Q9NRR2 321 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 PEF1Q9UBV8 284 aaKnown RBP9.21□□□□□ -0.94
SMAD9-202ENST00000379826 CEP192Q8TEP8 1941 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 IGHV3OR16-13A0A075B7E8 117 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 IGHV3-74A0A0B4J1X5 117 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 SYS1-DBNDD2H3BUS1 97 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 K7ERU9 68 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 PSG1P11464 419 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 IGLL1P15814 213 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 ZNF474Q6S9Z5 364 aaPredicted RBP9.21□□□□□ -0.94
SMAD9-202ENST00000379826 ATP5L2Q7Z4Y8 100 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 C11orf52Q96A22 123 aa9.21□□□□□ -0.94
SMAD9-202ENST00000379826 H3BUT2 72 aa9.2□□□□□ -0.94
SMAD9-202ENST00000379826 TCRAP04437 139 aa9.2□□□□□ -0.94
SMAD9-202ENST00000379826 TMEM30BQ3MIR4 351 aa9.2□□□□□ -0.94
SMAD9-202ENST00000379826 ORAOV1Q8WV07 137 aa9.2□□□□□ -0.94
SMAD9-202ENST00000379826 TMEM158Q8WZ71 300 aa9.2□□□□□ -0.94
SMAD9-202ENST00000379826 CHCHD1Q96BP2 118 aaKnown RBP9.2□□□□□ -0.94
SMAD9-202ENST00000379826 FREM1Q5H8C1 2179 aa9.2□□□□□ -0.94
SMAD9-202ENST00000379826 P0C879 139 aa9.2□□□□□ -0.94
SMAD9-202ENST00000379826 A0A1W2PRX2 142 aa9.2□□□□□ -0.94
SMAD9-202ENST00000379826 MEF2CQ06413 473 aaPredicted RBP9.2□□□□□ -0.94
SMAD9-202ENST00000379826 C8orf46Q8TAG6 207 aa9.2□□□□□ -0.94
SMAD9-202ENST00000379826 NSUN5P1Q3KNT7 163 aa9.19□□□□□ -0.94
SMAD9-202ENST00000379826 ZNF414Q96IQ9 312 aa9.19□□□□□ -0.94
SMAD9-202ENST00000379826 SOX21Q9Y651 276 aaPredicted RBP9.19□□□□□ -0.94
SMAD9-202ENST00000379826 RASL11AQ6T310 242 aa9.19□□□□□ -0.94
SMAD9-202ENST00000379826 C1RLQ9NZP8 487 aa9.19□□□□□ -0.94
SMAD9-202ENST00000379826 IGKV3-7A0A075B6H7 116 aa9.19□□□□□ -0.94
SMAD9-202ENST00000379826 S100A4P26447 101 aaKnown RBP9.19□□□□□ -0.94
SMAD9-202ENST00000379826 GAGE1Q13065 139 aa9.19□□□□□ -0.94
SMAD9-202ENST00000379826 PRR30Q53SZ7 412 aaPredicted RBP9.19□□□□□ -0.94
SMAD9-202ENST00000379826 EXPH5Q8NEV8 1989 aa9.19□□□□□ -0.94
SMAD9-202ENST00000379826 OR2T8A6NH00 312 aa9.19□□□□□ -0.94
SMAD9-202ENST00000379826 C1orf229Q6ZS94 237 aaPredicted RBP9.19□□□□□ -0.94
SMAD9-202ENST00000379826 NDUFA4L2Q9NRX3 87 aa9.19□□□□□ -0.94
SMAD9-202ENST00000379826 ACACAQ13085 2346 aa9.19□□□□□ -0.94
SMAD9-202ENST00000379826 IGHV1-24A0A0C4DH33 117 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 A0A1W2PNU3 283 aaPredicted RBP9.18□□□□□ -0.94
SMAD9-202ENST00000379826 RNF223E7ERA6 249 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 ST20Q9HBF5 79 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 A0A1W2PPI3 338 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 TP53TG3Q9ULZ0 132 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 IGHG3P01860 377 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 CACNG7P62955 275 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 SLC25A39Q9BZJ4 359 aaPredicted RBP9.18□□□□□ -0.94
SMAD9-202ENST00000379826 FABP2P12104 132 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 PET117Q6UWS5 81 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 TMEM167AQ8TBQ9 72 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 NCOR1O75376 2440 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 D6R8Y8 96 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 MGPP08493 103 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 PLP1P60201 277 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 WT1-ASQ06250 92 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 TMEM249Q2WGJ8 235 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 OR4X2Q8NGF9 303 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 MAP1LC3AQ9H492 121 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 PSG8Q9UQ74 426 aa9.18□□□□□ -0.94
SMAD9-202ENST00000379826 MRPS16Q9Y3D3 137 aaKnown RBP9.18□□□□□ -0.94
SMAD9-202ENST00000379826 IGHV3-49A0A0A0MS15 119 aa9.17□□□□□ -0.94
SMAD9-202ENST00000379826 NCR2O95944 276 aa9.17□□□□□ -0.94
SMAD9-202ENST00000379826 PPIFP30405 207 aaKnown RBP9.17□□□□□ -0.94
SMAD9-202ENST00000379826 HIST1H1AQ02539 215 aaPredicted RBP9.17□□□□□ -0.94
SMAD9-202ENST00000379826 IGFL4Q6B9Z1 124 aa9.17□□□□□ -0.94
SMAD9-202ENST00000379826 OR5AN1Q8NGI8 311 aa9.17□□□□□ -0.94
SMAD9-202ENST00000379826 KLK15Q9H2R5 256 aa9.17□□□□□ -0.94
SMAD9-202ENST00000379826 EVI2AP22794 236 aa9.17□□□□□ -0.94
SMAD9-202ENST00000379826 EBLN2Q6P2I7 272 aa9.17□□□□□ -0.94
SMAD9-202ENST00000379826 MYOZ3Q8TDC0 251 aa9.17□□□□□ -0.94
SMAD9-202ENST00000379826 IGF2BP2-AS1Q96M15 143 aa9.17□□□□□ -0.94
SMAD9-202ENST00000379826 TMEM133Q9H2Q1 129 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms