RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 HOXA3O43365 443 aaPredicted RBP7.14□□□□□ -1.27
PCDH9-202ENST00000377865 FAM27E3Q08E93 113 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 NDUFA4L2Q9NRX3 87 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 U3KQA8 63 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 CACNA1IQ9P0X4 2223 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 IGHV1-24A0A0C4DH33 117 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 NDUFA3O95167 84 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 CDKN1BP46527 198 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 POU2AF1Q16633 256 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 TMEM200BQ69YZ2 307 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 ZNF833PQ6ZTB9 187 aa7.14□□□□□ -1.27
PCDH9-202ENST00000377865 ZNF71Q9NQZ8 489 aaPredicted RBP7.14□□□□□ -1.27
PCDH9-202ENST00000377865 IGLC7A0M8Q6 106 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 LYZL1Q6UWQ5 148 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 C9orf118A6NHY6 69 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 COX8AP10176 69 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 IGLL1P15814 213 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 LAGE3Q14657 143 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 DGAT2L7PQ6IED9 249 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 DMRTC2Q8IXT2 367 aaPredicted RBP7.13□□□□□ -1.27
PCDH9-202ENST00000377865 SPOCK3Q9BQ16 436 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 CHTOPQ9Y3Y2 248 aaKnown RBP7.13□□□□□ -1.27
PCDH9-202ENST00000377865 SDK1Q7Z5N4 2213 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 ZNF503-AS2A6NEH8 195 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 CGB1A6NKQ9 187 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 PLNP26678 52 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 GAGE13Q4V321 117 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 WFDC3Q8IUB2 231 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 STPG4Q8N801 248 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 KLK15Q9H2R5 256 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 SH2D1AO60880 128 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 EBLN2Q6P2I7 272 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 THAP8Q8NA92 274 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 LSM4Q9Y4Z0 139 aaKnown RBP7.13□□□□□ -1.27
PCDH9-202ENST00000377865 ALPK2Q86TB3 2170 aa7.13□□□□□ -1.27
PCDH9-202ENST00000377865 NPIPB6E9PJ23 425 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 NUP210LQ5VU65 1888 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 PMS2P5A8MQ11 134 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 TMEM262E9PQX1 116 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 IGHV1-8P0DP01 117 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 GATA4P43694 442 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 PDE6HQ13956 83 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 KLF17Q5JT82 389 aaPredicted RBP7.12□□□□□ -1.27
PCDH9-202ENST00000377865 BCL6BQ8N143 479 aaPredicted RBP7.12□□□□□ -1.27
PCDH9-202ENST00000377865 EXOC3-AS1Q8N2X6 119 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 Q8TCH9 128 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 RCHY1Q96PM5 261 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 FGF23Q9GZV9 251 aaPredicted RBP7.12□□□□□ -1.27
PCDH9-202ENST00000377865 TMEM14CQ9P0S9 112 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 SIVA1O15304 175 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 C10orf55Q5SWW7 151 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 APOMO95445 188 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 C17orf58Q2M2W7 97 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 LGALS9BQ3B8N2 356 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 LGALS9CQ6DKI2 356 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 SPACA3Q8IXA5 215 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 ZNF418Q8TF45 676 aaPredicted RBP7.12□□□□□ -1.27
PCDH9-202ENST00000377865 SEC16AO15027 2179 aa7.12□□□□□ -1.27
PCDH9-202ENST00000377865 BVES-AS1Q5T3Y7 98 aa7.11□□□□□ -1.27
PCDH9-202ENST00000377865 SHANK2-AS3Q9BTD1 123 aa7.11□□□□□ -1.27
PCDH9-202ENST00000377865 K7EP34 96 aa7.11□□□□□ -1.27
PCDH9-202ENST00000377865 LINC00479Q96M42 142 aa7.11□□□□□ -1.27
PCDH9-202ENST00000377865 IGHV1-3A0A0C4DH29 117 aa7.11□□□□□ -1.27
PCDH9-202ENST00000377865 PRSS46E5RG02 174 aa7.11□□□□□ -1.27
PCDH9-202ENST00000377865 TMEM178BH3BS89 294 aa7.11□□□□□ -1.27
PCDH9-202ENST00000377865 NEU4Q8WWR8 484 aaPredicted RBP7.11□□□□□ -1.27
PCDH9-202ENST00000377865 UBTD1Q9HAC8 227 aa7.11□□□□□ -1.27
PCDH9-202ENST00000377865 MBD3L4A6NDZ8 208 aaPredicted RBP7.11□□□□□ -1.27
PCDH9-202ENST00000377865 MBD3L3A6NE82 208 aaPredicted RBP7.11□□□□□ -1.27
PCDH9-202ENST00000377865 MBD3L5A6NJ08 208 aaPredicted RBP7.11□□□□□ -1.27
PCDH9-202ENST00000377865 IGHV3-23P01764 117 aa7.11□□□□□ -1.27
PCDH9-202ENST00000377865 FOXC1Q12948 553 aa7.11□□□□□ -1.27
PCDH9-202ENST00000377865 MBD3L2Q8NHZ7 208 aaPredicted RBP7.11□□□□□ -1.27
PCDH9-202ENST00000377865 H7C2G1 150 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 CFHR2P36980 270 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 FAM159AQ6UWV7 190 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 IFI27P40305 119 aaPredicted RBP7.1□□□□□ -1.27
PCDH9-202ENST00000377865 CHAC1Q9BUX1 264 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 IGKV1-16P04430 117 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 RHOGP84095 191 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 CIRBPQ14011 172 aaKnown RBP7.1□□□□□ -1.27
PCDH9-202ENST00000377865 KHDC1LQ5JSQ8 128 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 CYSLTR1Q9Y271 337 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 PHF3Q92576 2039 aaKnown RBP7.1□□□□□ -1.27
PCDH9-202ENST00000377865 CCL21O00585 134 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 TMEM170BQ5T4T1 132 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 FXYD5Q96DB9 178 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 THADAQ6YHU6 1953 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 NUPR1O60356 82 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 LTAP01374 205 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 Q6ZR03 302 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 ODF3L1Q8IXM7 274 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 IGF2BP2-AS1Q96M15 143 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 SIGLEC9Q9Y336 463 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 KMT2EQ8IZD2 1858 aa7.1□□□□□ -1.27
PCDH9-202ENST00000377865 H7C1H1 209 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 FAM106AQ4KMX7 169 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 CRIP3Q6Q6R5 217 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 LINC00311Q8N616 119 aa7.09□□□□□ -1.27
PCDH9-202ENST00000377865 TRAV21A0A0B4J279 112 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms