RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.83□□□□□ -1
RTN3-206ENST00000377819 TIMM23O14925 209 aa8.83□□□□□ -1
RTN3-206ENST00000377819 IL18BPO95998 194 aa8.83□□□□□ -1
RTN3-206ENST00000377819 CD300CQ08708 224 aa8.83□□□□□ -1
RTN3-206ENST00000377819 AMELYQ99218 206 aa8.83□□□□□ -1
RTN3-206ENST00000377819 MPTX1A8MV57 137 aa8.82□□□□□ -1
RTN3-206ENST00000377819 OOSP1A8MZH6 123 aa8.82□□□□□ -1
RTN3-206ENST00000377819 SELLP14151 372 aa8.82□□□□□ -1
RTN3-206ENST00000377819 TMEM170AQ8WVE7 144 aa8.82□□□□□ -1
RTN3-206ENST00000377819 SPANXCQ9NY87 97 aa8.82□□□□□ -1
RTN3-206ENST00000377819 TRBV25-1A0A075B6N4 114 aa8.82□□□□□ -1
RTN3-206ENST00000377819 YPEL1O60688 119 aa8.82□□□□□ -1
RTN3-206ENST00000377819 NXPH4O95158 308 aa8.82□□□□□ -1
RTN3-206ENST00000377819 C15orf32Q32M92 178 aa8.82□□□□□ -1
RTN3-206ENST00000377819 YPEL2Q96QA6 119 aa8.82□□□□□ -1
RTN3-206ENST00000377819 CSTL1Q9H114 145 aa8.82□□□□□ -1
RTN3-206ENST00000377819 ZMAT4Q9H898 229 aa8.82□□□□□ -1
RTN3-206ENST00000377819 IGHV2OR16-5A0A0B4J2B6 119 aa8.82□□□□□ -1
RTN3-206ENST00000377819 TMEM52Q8NDY8 209 aa8.82□□□□□ -1
RTN3-206ENST00000377819 SCRT1Q9BWW7 348 aa8.82□□□□□ -1
RTN3-206ENST00000377819 GNB1LQ9BYB4 327 aa8.82□□□□□ -1
RTN3-206ENST00000377819 ACACBO00763 2458 aa8.82□□□□□ -1
RTN3-206ENST00000377819 DOCK1Q14185 1865 aa8.82□□□□□ -1
RTN3-206ENST00000377819 IGHG4P01861 327 aa8.81□□□□□ -1
RTN3-206ENST00000377819 FUSP35637 526 aaKnown RBP eCLIP8.81□□□□□ -1
RTN3-206ENST00000377819 LHX2P50458 406 aa8.81□□□□□ -1
RTN3-206ENST00000377819 CSRP2Q16527 193 aa8.81□□□□□ -1
RTN3-206ENST00000377819 MPV17L2Q567V2 206 aa8.81□□□□□ -1
RTN3-206ENST00000377819 TPTE2P1Q5T6R2 138 aa8.81□□□□□ -1
RTN3-206ENST00000377819 PYYP10082 97 aa8.81□□□□□ -1
RTN3-206ENST00000377819 NAA38Q9BRA0 125 aaKnown RBP8.81□□□□□ -1
RTN3-206ENST00000377819 GAGE12JA6NER3 117 aa8.81□□□□□ -1
RTN3-206ENST00000377819 FOXL2P58012 376 aa8.81□□□□□ -1
RTN3-206ENST00000377819 GAGE1Q13065 139 aa8.81□□□□□ -1
RTN3-206ENST00000377819 GAGE4Q13068 117 aa8.81□□□□□ -1
RTN3-206ENST00000377819 GAGE5Q13069 117 aa8.81□□□□□ -1
RTN3-206ENST00000377819 GAGE6Q13070 117 aa8.81□□□□□ -1
RTN3-206ENST00000377819 IL17RELQ6ZVW7 336 aa8.81□□□□□ -1
RTN3-206ENST00000377819 USMG5Q96IX5 58 aa8.81□□□□□ -1
RTN3-206ENST00000377819 C1orf43Q9BWL3 253 aa8.81□□□□□ -1
RTN3-206ENST00000377819 MYO7BQ6PIF6 2116 aa8.81□□□□□ -1
RTN3-206ENST00000377819 TRBV5-7A0A0A0MS05 114 aa8.81□□□□□ -1
RTN3-206ENST00000377819 A0A1W2PPV9 198 aa8.81□□□□□ -1
RTN3-206ENST00000377819 PSG7Q13046 419 aa8.81□□□□□ -1
RTN3-206ENST00000377819 ATP1A1-AS1Q5TC04 95 aa8.81□□□□□ -1
RTN3-206ENST00000377819 TRBV20-1A0A075B6N2 111 aa8.8□□□□□ -1
RTN3-206ENST00000377819 GUSBP1Q15486 140 aa8.8□□□□□ -1
RTN3-206ENST00000377819 VWC2Q2TAL6 325 aa8.8□□□□□ -1
RTN3-206ENST00000377819 NDUFC2O95298 119 aa8.8□□□□□ -1
RTN3-206ENST00000377819 C14orf178Q8N769 122 aaPredicted RBP8.8□□□□□ -1
RTN3-206ENST00000377819 NACAE9PAV3 2078 aa8.8□□□□□ -1
RTN3-206ENST00000377819 FANCMQ8IYD8 2048 aa8.8□□□□□ -1
RTN3-206ENST00000377819 SUPT4H1P63272 117 aaKnown RBP8.8□□□□□ -1
RTN3-206ENST00000377819 KLRD1Q13241 179 aa8.8□□□□□ -1
RTN3-206ENST00000377819 C20orf204Q6ZNR8 217 aa8.8□□□□□ -1
RTN3-206ENST00000377819 TMEM256Q8N2U0 113 aa8.8□□□□□ -1
RTN3-206ENST00000377819 RPRMLQ8N4K4 120 aa8.8□□□□□ -1
RTN3-206ENST00000377819 H3BUX3 64 aa8.8□□□□□ -1
RTN3-206ENST00000377819 ZNF525Q8N782 197 aa8.8□□□□□ -1
RTN3-206ENST00000377819 A0A1W2PQF6 199 aa8.79□□□□□ -1
RTN3-206ENST00000377819 PMS2P5A8MQ11 134 aa8.79□□□□□ -1
RTN3-206ENST00000377819 IGKV1D-16P01601 117 aa8.79□□□□□ -1
RTN3-206ENST00000377819 ZNF124Q15973 351 aa8.79□□□□□ -1
RTN3-206ENST00000377819 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.79□□□□□ -1
RTN3-206ENST00000377819 FAM181AQ8N9Y4 354 aa8.79□□□□□ -1
RTN3-206ENST00000377819 SAP25Q8TEE9 199 aa8.79□□□□□ -1
RTN3-206ENST00000377819 PRSS29PA6NIE9 313 aa8.79□□□□□ -1
RTN3-206ENST00000377819 EFNA4P52798 201 aa8.79□□□□□ -1
RTN3-206ENST00000377819 RSPO4Q2I0M5 234 aaPredicted RBP8.79□□□□□ -1
RTN3-206ENST00000377819 TRPT1Q86TN4 253 aaKnown RBP8.79□□□□□ -1
RTN3-206ENST00000377819 BMPERQ8N8U9 685 aa8.79□□□□□ -1
RTN3-206ENST00000377819 DKK4Q9UBT3 224 aa8.79□□□□□ -1
RTN3-206ENST00000377819 ARID2Q68CP9 1835 aa8.79□□□□□ -1
RTN3-206ENST00000377819 SHANK1Q9Y566 2161 aa8.79□□□□□ -1
RTN3-206ENST00000377819 D6R8Y8 96 aa8.79□□□□□ -1
RTN3-206ENST00000377819 COX6A1P12074 109 aa8.79□□□□□ -1
RTN3-206ENST00000377819 PRB3Q04118 309 aaPredicted RBP8.79□□□□□ -1
RTN3-206ENST00000377819 WFDC9Q8NEX5 89 aa8.79□□□□□ -1
RTN3-206ENST00000377819 COLQQ9Y215 455 aaPredicted RBP8.79□□□□□ -1
RTN3-206ENST00000377819 H2BFSP57053 126 aa8.78□□□□□ -1
RTN3-206ENST00000377819 MINOS1Q5TGZ0 78 aa8.78□□□□□ -1
RTN3-206ENST00000377819 SRXN1Q9BYN0 137 aa8.78□□□□□ -1
RTN3-206ENST00000377819 MINOS1-NBL1R4GNA1 71 aa8.78□□□□□ -1
RTN3-206ENST00000377819 SAA2-SAA4A0A096LPE2 208 aa8.78□□□□□ -1
RTN3-206ENST00000377819 SAA2P0DJI9 122 aaPredicted RBP8.78□□□□□ -1
RTN3-206ENST00000377819 FOXG1P55316 489 aaPredicted RBP8.78□□□□□ -1
RTN3-206ENST00000377819 OCC1Q8TAD7 63 aa8.78□□□□□ -1
RTN3-206ENST00000377819 A0A1B0GX51 115 aa8.78□□□□□ -1
RTN3-206ENST00000377819 E9PLN8 166 aa8.78□□□□□ -1
RTN3-206ENST00000377819 DEFB131AP59861 70 aa8.78□□□□□ -1
RTN3-206ENST00000377819 MCRIP2Q9BUT9 160 aaKnown RBP8.78□□□□□ -1
RTN3-206ENST00000377819 RBM38Q9H0Z9 239 aaKnown RBP8.78□□□□□ -1
RTN3-206ENST00000377819 CARHSP1Q9Y2V2 147 aaKnown RBP8.78□□□□□ -1
RTN3-206ENST00000377819 SLAQ13239 276 aa8.78□□□□□ -1
RTN3-206ENST00000377819 LCN12Q6JVE5 192 aa8.78□□□□□ -1
RTN3-206ENST00000377819 RALGAPA1Q6GYQ0 2036 aa8.77□□□□□ -1
RTN3-206ENST00000377819 LOC101059948A0A1B0GTJ6 334 aa8.77□□□□□ -1
RTN3-206ENST00000377819 A0A1B0GWJ7 208 aa8.77□□□□□ -1
RTN3-206ENST00000377819 APOC4P55056 127 aa8.77□□□□□ -1
RTN3-206ENST00000377819 FXYD7P58549 80 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms