RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 ZNF138P52744 262 aa16.24■□□□□ 0.19
CLN5-201ENST00000377453 PRRG2O14669 202 aa16.24■□□□□ 0.19
CLN5-201ENST00000377453 HIST1H1EP10412 219 aaKnown RBP16.24■□□□□ 0.19
CLN5-201ENST00000377453 GP9P14770 177 aa16.24■□□□□ 0.19
CLN5-201ENST00000377453 FOSL1P15407 271 aa16.24■□□□□ 0.19
CLN5-201ENST00000377453 HINT1P49773 126 aaPredicted RBP16.24■□□□□ 0.19
CLN5-201ENST00000377453 WIPF2Q8TF74 440 aaPredicted RBP16.24■□□□□ 0.19
CLN5-201ENST00000377453 SSX8Q7RTT4 187 aa16.23■□□□□ 0.19
CLN5-201ENST00000377453 OR8B2Q96RD0 313 aa16.23■□□□□ 0.19
CLN5-201ENST00000377453 TIMM8BQ9Y5J9 83 aaPredicted RBP16.23■□□□□ 0.19
CLN5-201ENST00000377453 ARHGAP32A7KAX9 2087 aa16.23■□□□□ 0.19
CLN5-201ENST00000377453 ASCL5Q7RTU5 278 aa16.23■□□□□ 0.19
CLN5-201ENST00000377453 C17orf77Q96MU5 243 aa16.23■□□□□ 0.19
CLN5-201ENST00000377453 GPR82Q96P67 336 aa16.23■□□□□ 0.19
CLN5-201ENST00000377453 TMEM133Q9H2Q1 129 aa16.23■□□□□ 0.19
CLN5-201ENST00000377453 UQCR10Q9UDW1 63 aa16.23■□□□□ 0.19
CLN5-201ENST00000377453 A0A1B0GXF2 115 aa16.22■□□□□ 0.19
CLN5-201ENST00000377453 CRYGCP07315 174 aa16.22■□□□□ 0.19
CLN5-201ENST00000377453 LINC00311Q8N616 119 aa16.22■□□□□ 0.19
CLN5-201ENST00000377453 RPP21Q9H633 154 aaKnown RBP16.22■□□□□ 0.19
CLN5-201ENST00000377453 NDUFB8O95169 186 aa16.22■□□□□ 0.19
CLN5-201ENST00000377453 GFRALQ6UXV0 394 aa16.22■□□□□ 0.19
CLN5-201ENST00000377453 ABCA4P78363 2273 aa16.22■□□□□ 0.19
CLN5-201ENST00000377453 IGHV2-26A0A0B4J1V2 119 aa16.21■□□□□ 0.19
CLN5-201ENST00000377453 SHISA9B4DS77 424 aa16.21■□□□□ 0.19
CLN5-201ENST00000377453 PSG1P11464 419 aa16.21■□□□□ 0.19
CLN5-201ENST00000377453 MLST8Q9BVC4 326 aa16.21■□□□□ 0.19
CLN5-201ENST00000377453 MRPL27Q9P0M9 148 aaKnown RBP16.21■□□□□ 0.19
CLN5-201ENST00000377453 SIGLEC9Q9Y336 463 aa16.21■□□□□ 0.19
CLN5-201ENST00000377453 TCRAP04437 139 aa16.21■□□□□ 0.19
CLN5-201ENST00000377453 ZNF596Q8TC21 504 aa16.21■□□□□ 0.19
CLN5-201ENST00000377453 C2orf70A6NJV1 201 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 P01737 135 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 RBP4P02753 201 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 GOLT1AQ6ZVE7 132 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 PRNTQ86SH4 94 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 Q8NA96 180 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 SPTBN4Q9H254 2564 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 A0A1W2PRD5 423 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 A0A1W2PRF3 423 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 A0A1W2PRM7 423 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 TEX22C9J3V5 150 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 LY6HO94772 140 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 IGLL1P15814 213 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 COL5A1-AS1Q5SY13 56 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 DMRTA1Q5VZB9 504 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 TRGV9Q99603 122 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 LAMTOR2Q9Y2Q5 125 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 INSIG2Q9Y5U4 225 aa16.2■□□□□ 0.18
CLN5-201ENST00000377453 IGHV1-69-2A0A0G2JMI3 117 aa16.19■□□□□ 0.18
CLN5-201ENST00000377453 H0Y8G0 127 aa16.19■□□□□ 0.18
CLN5-201ENST00000377453 HBBP68871 147 aa16.19■□□□□ 0.18
CLN5-201ENST00000377453 IGHV1-3A0A0C4DH29 117 aa16.19■□□□□ 0.18
CLN5-201ENST00000377453 MC5RP33032 325 aa16.19■□□□□ 0.18
CLN5-201ENST00000377453 KLF5Q13887 457 aaPredicted RBP16.19■□□□□ 0.18
CLN5-201ENST00000377453 KLF12Q9Y4X4 402 aa16.19■□□□□ 0.18
CLN5-201ENST00000377453 NBASA2RRP1 2371 aa16.19■□□□□ 0.18
CLN5-201ENST00000377453 OR2J3O76001 311 aa16.18■□□□□ 0.18
CLN5-201ENST00000377453 IGF2RP11717 2491 aa16.18■□□□□ 0.18
CLN5-201ENST00000377453 LDLRAD2Q5SZI1 272 aa16.18■□□□□ 0.18
CLN5-201ENST00000377453 FAM120AOSQ5T036 256 aa16.18■□□□□ 0.18
CLN5-201ENST00000377453 UNQ5815/PRO19632Q6UWF5 114 aa16.18■□□□□ 0.18
CLN5-201ENST00000377453 BCL6BQ8N143 479 aaPredicted RBP16.18■□□□□ 0.18
CLN5-201ENST00000377453 LTAP01374 205 aa16.18■□□□□ 0.18
CLN5-201ENST00000377453 CRYGBP07316 175 aa16.18■□□□□ 0.18
CLN5-201ENST00000377453 LGALS7P47929 136 aa16.18■□□□□ 0.18
CLN5-201ENST00000377453 FBLN7Q53RD9 439 aa16.18■□□□□ 0.18
CLN5-201ENST00000377453 KLF17Q5JT82 389 aaPredicted RBP16.18■□□□□ 0.18
CLN5-201ENST00000377453 IGF2-ASQ6U949 168 aa16.18■□□□□ 0.18
CLN5-201ENST00000377453 ERASQ7Z444 233 aa16.18■□□□□ 0.18
CLN5-201ENST00000377453 C5orf17Q8NAS9 161 aa16.18■□□□□ 0.18
CLN5-201ENST00000377453 TMEM116Q8NCL8 245 aa16.18■□□□□ 0.18
CLN5-201ENST00000377453 OR8B3Q8NGG8 313 aa16.18■□□□□ 0.18
CLN5-201ENST00000377453 TOMM40O96008 361 aa16.17■□□□□ 0.18
CLN5-201ENST00000377453 CSN3P07498 182 aa16.17■□□□□ 0.18
CLN5-201ENST00000377453 BTF3P20290 206 aaKnown RBP16.17■□□□□ 0.18
CLN5-201ENST00000377453 TSPOP30536 169 aa16.17■□□□□ 0.18
CLN5-201ENST00000377453 HIGD1AQ9Y241 93 aa16.17■□□□□ 0.18
CLN5-201ENST00000377453 C19orf71A6NCJ1 209 aa16.17■□□□□ 0.18
CLN5-201ENST00000377453 PLGLAQ15195 96 aa16.17■□□□□ 0.18
CLN5-201ENST00000377453 ETFRF1Q6IPR1 90 aa16.17■□□□□ 0.18
CLN5-201ENST00000377453 FAM71F2Q6NXP2 309 aa16.17■□□□□ 0.18
CLN5-201ENST00000377453 PPP1R27Q86WC6 154 aa16.17■□□□□ 0.18
CLN5-201ENST00000377453 C22orf15Q8WYQ4 148 aa16.17■□□□□ 0.18
CLN5-201ENST00000377453 PRSS22Q9GZN4 317 aa16.17■□□□□ 0.18
CLN5-201ENST00000377453 TLN1Q9Y490 2541 aaKnown RBP16.17■□□□□ 0.18
CLN5-201ENST00000377453 TCF21O43680 179 aa16.16■□□□□ 0.18
CLN5-201ENST00000377453 IGLC1P0CG04 106 aa16.16■□□□□ 0.18
CLN5-201ENST00000377453 NBL1P41271 181 aa16.16■□□□□ 0.18
CLN5-201ENST00000377453 RASL11AQ6T310 242 aa16.16■□□□□ 0.18
CLN5-201ENST00000377453 TEX45Q8NA69 505 aa16.16■□□□□ 0.18
CLN5-201ENST00000377453 C8orf46Q8TAG6 207 aa16.16■□□□□ 0.18
CLN5-201ENST00000377453 SRSF12Q8WXF0 261 aaKnown RBP16.16■□□□□ 0.18
CLN5-201ENST00000377453 SLC25A39Q9BZJ4 359 aaPredicted RBP16.16■□□□□ 0.18
CLN5-201ENST00000377453 F11RQ9Y624 299 aaKnown RBP16.16■□□□□ 0.18
CLN5-201ENST00000377453 ZNF785A8K8V0 405 aa16.16■□□□□ 0.18
CLN5-201ENST00000377453 SIAH2O43255 324 aa16.16■□□□□ 0.18
CLN5-201ENST00000377453 Q86TA4 180 aa16.16■□□□□ 0.18
CLN5-201ENST00000377453 LINC01560Q8TB33 94 aa16.16■□□□□ 0.18
CLN5-201ENST00000377453 DAZAP1Q96EP5 407 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms