RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SGK494Q96LW2 274 aa15.96■□□□□ 0.14
VSX1-202ENST00000376709 ATG101Q9BSB4 218 aa15.96■□□□□ 0.14
VSX1-202ENST00000376709 MRPL27Q9P0M9 148 aaKnown RBP15.96■□□□□ 0.14
VSX1-202ENST00000376709 UTP20O75691 2785 aaKnown RBP15.96■□□□□ 0.14
VSX1-202ENST00000376709 GNG7O60262 68 aa15.95■□□□□ 0.14
VSX1-202ENST00000376709 JOSD1Q15040 202 aaPredicted RBP15.95■□□□□ 0.14
VSX1-202ENST00000376709 TBX15Q96SF7 602 aa15.95■□□□□ 0.14
VSX1-202ENST00000376709 TRBV9A0A0B4J1U6 114 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 SMIM27A0A1W2PRY6 76 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 GRIFINA4D1Z8 144 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 OVOL3O00110 214 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 CA1P00915 261 aaPredicted RBP15.94■□□□□ 0.14
VSX1-202ENST00000376709 FAM106CPP0CH98 169 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 RNF224P0DH78 156 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 TMEM256Q8N2U0 113 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 GBGT1Q8N5D6 347 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 TMEM18Q96B42 140 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 TMEM14CQ9P0S9 112 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 VPS13CQ709C8 3753 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 IGLV11-55A0A075B6I3 123 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 TOMM40O96008 361 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 IL4P05112 153 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 GZMBP10144 247 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 DNLZQ5SXM8 178 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 FANCD2OSQ96PS1 177 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 GNB1LQ9BYB4 327 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 DOPEY1Q5JWR5 2465 aa15.94■□□□□ 0.14
VSX1-202ENST00000376709 FAM231DQ6ZW35 169 aa15.93■□□□□ 0.14
VSX1-202ENST00000376709 TTC9CQ8N5M4 171 aa15.93■□□□□ 0.14
VSX1-202ENST00000376709 RNF125Q96EQ8 232 aa15.93■□□□□ 0.14
VSX1-202ENST00000376709 TMEM68Q96MH6 324 aa15.93■□□□□ 0.14
VSX1-202ENST00000376709 KLF12Q9Y4X4 402 aa15.93■□□□□ 0.14
VSX1-202ENST00000376709 MYO18BQ8IUG5 2567 aa15.93■□□□□ 0.14
VSX1-202ENST00000376709 TRAV30A0A087WSZ9 112 aa15.93■□□□□ 0.14
VSX1-202ENST00000376709 GATCO43716 136 aaKnown RBP15.93■□□□□ 0.14
VSX1-202ENST00000376709 PRB1P04280 392 aa15.93■□□□□ 0.14
VSX1-202ENST00000376709 HIST1H1EP10412 219 aaKnown RBP15.93■□□□□ 0.14
VSX1-202ENST00000376709 OR5R1Q8NH85 324 aa15.93■□□□□ 0.14
VSX1-202ENST00000376709 LPAR2Q9HBW0 351 aa15.93■□□□□ 0.14
VSX1-202ENST00000376709 ZNF586Q9NXT0 402 aa15.93■□□□□ 0.14
VSX1-202ENST00000376709 C1RLQ9NZP8 487 aa15.93■□□□□ 0.14
VSX1-202ENST00000376709 THYN1Q9P016 225 aa15.93■□□□□ 0.14
VSX1-202ENST00000376709 NAT8BQ9UHF3 227 aa15.93■□□□□ 0.14
VSX1-202ENST00000376709 NUPR1O60356 82 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 IGHV4-39P01824 125 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 TCRAP04437 139 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 SAA4P35542 130 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 MFAP4P55083 255 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 WDR73Q6P4I2 378 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 ZNF491Q8N8L2 437 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 FAM168AQ92567 244 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 FMC1Q96HJ9 113 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 GPR82Q96P67 336 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 SHANK2-AS3Q9BTD1 123 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 MT-ND6P03923 174 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 BRS3P32247 399 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 RAB4BP61018 213 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 Q56UQ5 140 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 BPIFA4PQ86YQ2 179 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 NUDT10Q8NFP7 164 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 SMIM12Q96EX1 92 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 NUDT11Q96G61 164 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 OTORQ9NRC9 128 aa15.92■□□□□ 0.14
VSX1-202ENST00000376709 CRISP2P16562 243 aa15.91■□□□□ 0.14
VSX1-202ENST00000376709 FAM120AOSQ5T036 256 aa15.91■□□□□ 0.14
VSX1-202ENST00000376709 MRPL54Q6P161 138 aaKnown RBP15.91■□□□□ 0.14
VSX1-202ENST00000376709 IGHV7-81A0A0B4J1V7 117 aa15.9■□□□□ 0.14
VSX1-202ENST00000376709 H3BRN7 92 aa15.9■□□□□ 0.14
VSX1-202ENST00000376709 COX19Q49B96 90 aa15.9■□□□□ 0.14
VSX1-202ENST00000376709 Q8N9W7 124 aa15.9■□□□□ 0.14
VSX1-202ENST00000376709 OR4F17Q8NGA8 305 aa15.9■□□□□ 0.14
VSX1-202ENST00000376709 CMTM2Q8TAZ6 248 aa15.9■□□□□ 0.14
VSX1-202ENST00000376709 CHRDL1Q9BU40 450 aa15.9■□□□□ 0.14
VSX1-202ENST00000376709 C21orf62Q9NYP8 219 aa15.9■□□□□ 0.14
VSX1-202ENST00000376709 EXOC3-AS1Q8N2X6 119 aa15.9■□□□□ 0.14
VSX1-202ENST00000376709 GRAMD2BQ96HH9 432 aa15.9■□□□□ 0.14
VSX1-202ENST00000376709 PRO1933Q9H354 126 aa15.9■□□□□ 0.14
VSX1-202ENST00000376709 IZUMO1RA6ND01 250 aa15.89■□□□□ 0.13
VSX1-202ENST00000376709 AMY1AP04745 511 aa15.89■□□□□ 0.13
VSX1-202ENST00000376709 FAM209BQ5JX69 171 aa15.89■□□□□ 0.13
VSX1-202ENST00000376709 ZNF48Q96MX3 618 aaPredicted RBP15.89■□□□□ 0.13
VSX1-202ENST00000376709 TP53TG3Q9ULZ0 132 aa15.89■□□□□ 0.13
VSX1-202ENST00000376709 RNF24Q9Y225 148 aa15.89■□□□□ 0.13
VSX1-202ENST00000376709 OR2J3O76001 311 aa15.89■□□□□ 0.13
VSX1-202ENST00000376709 FCGR2BP31994 310 aaPredicted RBP15.89■□□□□ 0.13
VSX1-202ENST00000376709 USF2Q15853 346 aaPredicted RBP15.89■□□□□ 0.13
VSX1-202ENST00000376709 S100A7AQ86SG5 101 aa15.89■□□□□ 0.13
VSX1-202ENST00000376709 MBD6Q96DN6 1003 aa15.89■□□□□ 0.13
VSX1-202ENST00000376709 AJUBAQ96IF1 538 aa15.89■□□□□ 0.13
VSX1-202ENST00000376709 C7orf69Q9H7B7 122 aa15.89■□□□□ 0.13
VSX1-202ENST00000376709 CRYBG3Q68DQ2 2970 aa15.88■□□□□ 0.13
VSX1-202ENST00000376709 WI2-2373I1.2A0A1W2PRP0 233 aa15.88■□□□□ 0.13
VSX1-202ENST00000376709 LTAP01374 205 aa15.88■□□□□ 0.13
VSX1-202ENST00000376709 HLA-DRB1P01911 266 aa15.88■□□□□ 0.13
VSX1-202ENST00000376709 TMEM136Q6ZRR5 245 aa15.88■□□□□ 0.13
VSX1-202ENST00000376709 NDUFB8O95169 186 aa15.87■□□□□ 0.13
VSX1-202ENST00000376709 IGHV3-23P01764 117 aa15.87■□□□□ 0.13
VSX1-202ENST00000376709 BBC3Q96PG8 261 aaPredicted RBP15.87■□□□□ 0.13
VSX1-202ENST00000376709 CCL19Q99731 98 aa15.87■□□□□ 0.13
VSX1-202ENST00000376709 MLST8Q9BVC4 326 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms