RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 C18orf32Q8TCD1 76 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 TMEM70Q9BUB7 260 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 F11RQ9Y624 299 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 TCRBV4S1A1TA0A5B7 111 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 ZNF785A8K8V0 405 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 NMUP48645 174 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 PRR20EP86478 221 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 PRR20CP86479 221 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 PRR20DP86480 221 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 PRR20BP86481 221 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 PRR20AP86496 221 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 VWC2Q2TAL6 325 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 ZNF738Q8NE65 137 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 GPR82Q96P67 336 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 AAMDCQ9H7C9 122 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 USP9YO00507 2555 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 PRR30Q53SZ7 412 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 SLC25A48Q6ZT89 311 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 TP53TG3Q9ULZ0 132 aa11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 TRBV9A0A0B4J1U6 114 aa11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 ZNF207O43670 478 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 CD3EP07766 207 aa11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 GRAMD2BQ96HH9 432 aa11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 FAM215AQ9Y5M1 114 aa11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 PPIAL4CA0A0B4J2A2 164 aa11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 PPIAL4GP0DN37 164 aa11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 PSG1P11464 419 aa11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 ECSCRQ19T08 205 aa11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 COX19Q49B96 90 aa11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 C2orf83Q53S99 150 aa11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 SEM1Q6ZVN7 128 aa11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 MRPL32Q9BYC8 188 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1B-201ENST00000376259 DSCAML1Q8TD84 2053 aa11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 IGHV1-69-2A0A0G2JMI3 117 aa11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 AARDQ4LEZ3 155 aa11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 DEFB104AQ8WTQ1 72 aa11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 RPP21Q9H633 154 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 COL5A1P20908 1838 aaPredicted RBP11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 APOHP02749 345 aaPredicted RBP11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 ADIPOQQ15848 244 aa11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 MPV17L2Q567V2 206 aa11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 LINC00173Q6ZV60 143 aa11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 SPACA3Q8IXA5 215 aa11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 TMEM186Q96B77 213 aa11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 ZC2HC1AQ96GY0 325 aa11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 ZNF257Q9Y2Q1 563 aa11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 Q8N7P7 452 aa11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 STXBP6Q8NFX7 210 aa11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 SLC25A2Q9BXI2 301 aa11.62□□□□□ -0.55
TNFRSF1B-201ENST00000376259 ARL3P36405 182 aa11.61□□□□□ -0.55
TNFRSF1B-201ENST00000376259 RBPJQ06330 500 aa11.61□□□□□ -0.55
TNFRSF1B-201ENST00000376259 CACNG8Q8WXS5 425 aa11.61□□□□□ -0.55
TNFRSF1B-201ENST00000376259 UFC1Q9Y3C8 167 aa11.61□□□□□ -0.55
TNFRSF1B-201ENST00000376259 KALRNO60229 2985 aa11.61□□□□□ -0.55
TNFRSF1B-201ENST00000376259 FAM181BA6NEQ2 426 aa11.61□□□□□ -0.55
TNFRSF1B-201ENST00000376259 IGLV1-44P01699 117 aa11.61□□□□□ -0.55
TNFRSF1B-201ENST00000376259 ZNF503Q96F45 646 aa11.61□□□□□ -0.55
TNFRSF1B-201ENST00000376259 WNK1Q9H4A3 2382 aa11.61□□□□□ -0.55
TNFRSF1B-201ENST00000376259 TET2Q6N021 2002 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF1B-201ENST00000376259 PDLIM4P50479 330 aa11.61□□□□□ -0.55
TNFRSF1B-201ENST00000376259 IGHV3OR16-10A0A075B7F0 116 aa11.6□□□□□ -0.55
TNFRSF1B-201ENST00000376259 PRSS1P07477 247 aa11.6□□□□□ -0.55
TNFRSF1B-201ENST00000376259 MC5RP33032 325 aa11.6□□□□□ -0.55
TNFRSF1B-201ENST00000376259 ZNF329Q86UD4 541 aa11.6□□□□□ -0.55
TNFRSF1B-201ENST00000376259 KLRD1Q13241 179 aa11.6□□□□□ -0.55
TNFRSF1B-201ENST00000376259 BPIFA4PQ86YQ2 179 aa11.6□□□□□ -0.55
TNFRSF1B-201ENST00000376259 A0A087X0K7 114 aa11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 C19orf67A6NJJ6 358 aa11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 TWIST1Q15672 202 aa11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 SLC25A34Q6PIV7 304 aa11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 PPP1R27Q86WC6 154 aa11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 LOXL4Q96JB6 756 aa11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 C17orf77Q96MU5 243 aa11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 AP5S1Q9NUS5 200 aa11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 A0A0G2JNJ9 132 aa11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 FAM90A9PA6NNJ1 464 aa11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 COMPP49747 757 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 RNASE6Q93091 150 aaKnown RBP11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 C19orf24Q9BVV8 132 aa11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 Q9UFV3 132 aa11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 TM4SF5O14894 197 aa11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 IGLL1P15814 213 aa11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 Q8TAT8 98 aa11.59□□□□□ -0.55
TNFRSF1B-201ENST00000376259 CLEC3BP05452 202 aa11.58□□□□□ -0.55
TNFRSF1B-201ENST00000376259 IGLC2P0DOY2 106 aa11.58□□□□□ -0.55
TNFRSF1B-201ENST00000376259 IGLC3P0DOY3 106 aa11.58□□□□□ -0.55
TNFRSF1B-201ENST00000376259 TSPOP30536 169 aa11.58□□□□□ -0.55
TNFRSF1B-201ENST00000376259 EIF4EBP1Q13541 118 aaPredicted RBP11.58□□□□□ -0.55
TNFRSF1B-201ENST00000376259 DDB2Q92466 427 aa11.58□□□□□ -0.55
TNFRSF1B-201ENST00000376259 NCR2O95944 276 aa11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 SCGB2A2Q13296 93 aa11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 PATE2Q6UY27 113 aa11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 NDUFA4L2Q9NRX3 87 aa11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 TACC2O95359 2948 aa11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 TRAV9-2A0A087WT02 112 aa11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 KIR2DL5BA0A0G2JN68 375 aa11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 KIR2DL5BA0A0G2JPC4 375 aa11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1B-201ENST00000376259 MBD3L4A6NDZ8 208 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms