RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 DENND4CQ5VZ89 1909 aa11.12□□□□□ -0.63
C9orf47-203ENST00000375851 ATP5LO75964 103 aa11.12□□□□□ -0.63
C9orf47-203ENST00000375851 PAX1P15863 534 aa11.12□□□□□ -0.63
C9orf47-203ENST00000375851 ZNRD1Q9P1U0 126 aa11.12□□□□□ -0.63
C9orf47-203ENST00000375851 PEMTQ9UBM1 199 aa11.12□□□□□ -0.63
C9orf47-203ENST00000375851 IGKV3OR2-268A0A0C4DH90 116 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 ITGB1BP1O14713 200 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 FABP2P12104 132 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 PPIFP30405 207 aaKnown RBP11.11□□□□□ -0.63
C9orf47-203ENST00000375851 DSCR9P59020 149 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 CTAG1AP78358 180 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 LIME1Q9H400 295 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 TECTAO75443 2155 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 B4DSR2 109 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 CXCL1P09341 107 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 FBLN7Q53RD9 439 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 EXOC3-AS1Q8N2X6 119 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 BPESC1Q9GZL8 116 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 PRDM13Q9H4Q3 707 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 H3BUX3 64 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 RNASE2P10153 161 aaKnown RBP11.11□□□□□ -0.63
C9orf47-203ENST00000375851 TMEM170BQ5T4T1 132 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 TSKUQ8WUA8 353 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 NPIPB5A8MRT5 1133 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 RPL15P61313 204 aaKnown RBP11.11□□□□□ -0.63
C9orf47-203ENST00000375851 SCGB3A1Q96QR1 104 aa11.11□□□□□ -0.63
C9orf47-203ENST00000375851 NPFFO15130 113 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 COX6CP09669 75 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 PRTN3P24158 256 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 ERVK11-1P61568 191 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 NUDT10Q8NFP7 164 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 NUDT11Q96G61 164 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 ZMAT5Q9UDW3 170 aaKnown RBP11.1□□□□□ -0.63
C9orf47-203ENST00000375851 MED13Q9UHV7 2174 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 CD7P09564 240 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 GATA4P43694 442 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 ERASQ7Z444 233 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 PIP4P1Q86T03 277 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 LINC01587Q99440 93 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 PSMB11A5LHX3 300 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 TMEM155Q4W5P6 130 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 LDLRAD2Q5SZI1 272 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 KIAA1671Q9BY89 1806 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 TRAV21A0A0B4J279 112 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 K7ERU9 68 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 GSN-AS1Q9NRJ2 163 aa11.1□□□□□ -0.63
C9orf47-203ENST00000375851 ANKHD1Q8IWZ3 2542 aaKnown RBP11.09□□□□□ -0.63
C9orf47-203ENST00000375851 TMEM50AO95807 157 aa11.09□□□□□ -0.63
C9orf47-203ENST00000375851 C11orf44Q8N8P7 122 aa11.09□□□□□ -0.63
C9orf47-203ENST00000375851 FOXC2Q99958 501 aa11.09□□□□□ -0.63
C9orf47-203ENST00000375851 GNB1LQ9BYB4 327 aa11.09□□□□□ -0.63
C9orf47-203ENST00000375851 FAM215AQ9Y5M1 114 aa11.09□□□□□ -0.63
C9orf47-203ENST00000375851 SRD5A1P18405 259 aa11.09□□□□□ -0.63
C9orf47-203ENST00000375851 CD33P20138 364 aa11.09□□□□□ -0.63
C9orf47-203ENST00000375851 PMCHL2Q9BQD1 86 aa11.09□□□□□ -0.63
C9orf47-203ENST00000375851 SNAI2O43623 268 aa11.08□□□□□ -0.64
C9orf47-203ENST00000375851 IGLV1-44P01699 117 aa11.08□□□□□ -0.64
C9orf47-203ENST00000375851 TCRAP04437 139 aa11.08□□□□□ -0.64
C9orf47-203ENST00000375851 ST6GALNAC6Q969X2 333 aa11.08□□□□□ -0.64
C9orf47-203ENST00000375851 IGLV3-1P01715 115 aa11.08□□□□□ -0.64
C9orf47-203ENST00000375851 FOXL1Q12952 345 aa11.08□□□□□ -0.64
C9orf47-203ENST00000375851 CIRBPQ14011 172 aaKnown RBP11.08□□□□□ -0.64
C9orf47-203ENST00000375851 ZNF256Q9Y2P7 627 aaPredicted RBP11.08□□□□□ -0.64
C9orf47-203ENST00000375851 NUP210Q8TEM1 1887 aaPredicted RBP11.08□□□□□ -0.64
C9orf47-203ENST00000375851 SUMO2P61956 95 aaKnown RBP11.08□□□□□ -0.64
C9orf47-203ENST00000375851 C3orf36Q3SXR2 165 aa11.08□□□□□ -0.64
C9orf47-203ENST00000375851 SIGLEC15Q6ZMC9 328 aa11.08□□□□□ -0.64
C9orf47-203ENST00000375851 ARL6IP6Q8N6S5 226 aa11.08□□□□□ -0.64
C9orf47-203ENST00000375851 CSPG4Q6UVK1 2322 aa11.07□□□□□ -0.64
C9orf47-203ENST00000375851 IGKV2-40A0A087WW87 121 aaPredicted RBP11.07□□□□□ -0.64
C9orf47-203ENST00000375851 IGKV2D-40P01614 121 aaPredicted RBP11.07□□□□□ -0.64
C9orf47-203ENST00000375851 MEIG1Q5JSS6 88 aa11.07□□□□□ -0.64
C9orf47-203ENST00000375851 Q8TCH9 128 aa11.07□□□□□ -0.64
C9orf47-203ENST00000375851 DUSP14O95147 198 aaKnown RBP11.07□□□□□ -0.64
C9orf47-203ENST00000375851 LINC00614P0C842 121 aa11.07□□□□□ -0.64
C9orf47-203ENST00000375851 GZMBP10144 247 aa11.07□□□□□ -0.64
C9orf47-203ENST00000375851 DUX4L9Q6RFH8 374 aaPredicted RBP11.07□□□□□ -0.64
C9orf47-203ENST00000375851 A0A1W2PPI3 338 aa11.07□□□□□ -0.64
C9orf47-203ENST00000375851 SAA4P35542 130 aa11.07□□□□□ -0.64
C9orf47-203ENST00000375851 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.06□□□□□ -0.64
C9orf47-203ENST00000375851 SPSB3Q6PJ21 355 aa11.06□□□□□ -0.64
C9orf47-203ENST00000375851 PARD6GQ9BYG4 376 aaPredicted RBP11.06□□□□□ -0.64
C9orf47-203ENST00000375851 SELENOKQ9Y6D0 94 aa11.06□□□□□ -0.64
C9orf47-203ENST00000375851 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.06□□□□□ -0.64
C9orf47-203ENST00000375851 WIPF3A6NGB9 483 aa11.06□□□□□ -0.64
C9orf47-203ENST00000375851 OVOL1O14753 267 aa11.06□□□□□ -0.64
C9orf47-203ENST00000375851 PPBPP02775 128 aa11.06□□□□□ -0.64
C9orf47-203ENST00000375851 JOSD1Q15040 202 aaPredicted RBP11.06□□□□□ -0.64
C9orf47-203ENST00000375851 CFHR2P36980 270 aa11.06□□□□□ -0.64
C9orf47-203ENST00000375851 HIST1H2BLQ99880 126 aa11.06□□□□□ -0.64
C9orf47-203ENST00000375851 IGLV3-9A0A075B6K5 115 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 UBE2CO00762 179 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 WT1P19544 449 aaPredicted RBP11.05□□□□□ -0.64
C9orf47-203ENST00000375851 LEPP41159 167 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 RNF138Q8WVD3 245 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 TMEM262E9PQX1 116 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 FNDC10F2Z333 226 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 DKK1O94907 266 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 IGKV1-39P01597 117 aa11.05□□□□□ -0.64
C9orf47-203ENST00000375851 IGKV1D-39P04432 117 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms