RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 GGTLC1Q9BX51 225 aa11.25□□□□□ -0.61
COL4A1-201ENST00000375820 EDA2RQ9HAV5 297 aa11.25□□□□□ -0.61
COL4A1-201ENST00000375820 IGHV3-16A0A0C4DH30 117 aa11.25□□□□□ -0.61
COL4A1-201ENST00000375820 LINC00271P0C7V0 271 aa11.25□□□□□ -0.61
COL4A1-201ENST00000375820 FER1L5A0AVI2 2057 aa11.25□□□□□ -0.61
COL4A1-201ENST00000375820 AHCTF1Q8WYP5 2266 aa11.25□□□□□ -0.61
COL4A1-201ENST00000375820 HIST1H2BLQ99880 126 aa11.25□□□□□ -0.61
COL4A1-201ENST00000375820 CACNA1DQ01668 2161 aa11.25□□□□□ -0.61
COL4A1-201ENST00000375820 GAGE2EQ4V326 116 aa11.25□□□□□ -0.61
COL4A1-201ENST00000375820 C6orf226Q5I0X4 101 aa11.25□□□□□ -0.61
COL4A1-201ENST00000375820 MORN3Q6PF18 240 aaPredicted RBP11.25□□□□□ -0.61
COL4A1-201ENST00000375820 BCL6BQ8N143 479 aaPredicted RBP11.25□□□□□ -0.61
COL4A1-201ENST00000375820 PIP4P2Q8N4L2 257 aa11.25□□□□□ -0.61
COL4A1-201ENST00000375820 GAGE2DQ9UEU5 116 aa11.25□□□□□ -0.61
COL4A1-201ENST00000375820 PATJQ8NI35 1801 aa11.25□□□□□ -0.61
COL4A1-201ENST00000375820 RUSC1-AS1Q66K80 236 aa11.25□□□□□ -0.61
COL4A1-201ENST00000375820 TEX43Q6ZNM6 134 aa11.25□□□□□ -0.61
COL4A1-201ENST00000375820 TP53BP1Q12888 1972 aaPredicted RBP11.24□□□□□ -0.61
COL4A1-201ENST00000375820 F2Z2F3 143 aa11.24□□□□□ -0.61
COL4A1-201ENST00000375820 CSRP3P50461 194 aa11.24□□□□□ -0.61
COL4A1-201ENST00000375820 TPTE2P1Q5T6R2 138 aa11.24□□□□□ -0.61
COL4A1-201ENST00000375820 KLHDC3Q9BQ90 382 aa11.24□□□□□ -0.61
COL4A1-201ENST00000375820 MS4A6AQ9H2W1 248 aa11.24□□□□□ -0.61
COL4A1-201ENST00000375820 DOCK3Q8IZD9 2030 aa11.24□□□□□ -0.61
COL4A1-201ENST00000375820 AKAP6Q13023 2319 aa11.24□□□□□ -0.61
COL4A1-201ENST00000375820 EFNA2O43921 213 aa11.24□□□□□ -0.61
COL4A1-201ENST00000375820 ZNF883P0CG24 379 aa11.24□□□□□ -0.61
COL4A1-201ENST00000375820 FAM186AA6NE01 2351 aa11.24□□□□□ -0.61
COL4A1-201ENST00000375820 TNFRSF6BO95407 300 aa11.24□□□□□ -0.61
COL4A1-201ENST00000375820 LYPD2Q6UXB3 125 aa11.24□□□□□ -0.61
COL4A1-201ENST00000375820 ITGB1BP1O14713 200 aa11.23□□□□□ -0.61
COL4A1-201ENST00000375820 CHCHD1Q96BP2 118 aaKnown RBP11.23□□□□□ -0.61
COL4A1-201ENST00000375820 NDUFAF3Q9BU61 184 aa11.23□□□□□ -0.61
COL4A1-201ENST00000375820 PARP14Q460N5 1801 aa11.23□□□□□ -0.61
COL4A1-201ENST00000375820 TMEM256Q8N2U0 113 aa11.23□□□□□ -0.61
COL4A1-201ENST00000375820 CFHR1Q03591 330 aa11.23□□□□□ -0.61
COL4A1-201ENST00000375820 MSRB2Q9Y3D2 182 aa11.23□□□□□ -0.61
COL4A1-201ENST00000375820 E9PLN8 166 aa11.23□□□□□ -0.61
COL4A1-201ENST00000375820 A0A0G2JNJ9 132 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 COL8A2P25067 703 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 RPL36AP83881 106 aaKnown RBP11.22□□□□□ -0.61
COL4A1-201ENST00000375820 HEPN1Q6WQI6 88 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 RPL36ALQ969Q0 106 aaKnown RBP11.22□□□□□ -0.61
COL4A1-201ENST00000375820 Q9UFV3 132 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 LYPD3O95274 346 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 TMEM158Q8WZ71 300 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 MRPS18CQ9Y3D5 142 aaKnown RBP11.22□□□□□ -0.61
COL4A1-201ENST00000375820 GAGE2AQ6NT46 116 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 GGNQ86UU5 652 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 TMEM178BH3BS89 294 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 DKK1O94907 266 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 ID3Q02535 119 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 C2orf82Q6UX34 121 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 NUP35Q8NFH5 326 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 TMEM238C9JI98 176 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 AMBPP02760 352 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 HSD52Q0P140 79 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 FLVCR1-AS1Q8TAF5 88 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 DOCK4Q8N1I0 1966 aa11.22□□□□□ -0.61
COL4A1-201ENST00000375820 PPBPP02775 128 aa11.21□□□□□ -0.61
COL4A1-201ENST00000375820 SYNJ2BPP57105 145 aa11.21□□□□□ -0.61
COL4A1-201ENST00000375820 WDR83OSQ9Y284 106 aa11.21□□□□□ -0.61
COL4A1-201ENST00000375820 SSBP2P81877 361 aaPredicted RBP11.21□□□□□ -0.61
COL4A1-201ENST00000375820 PLXNA1Q9UIW2 1896 aa11.21□□□□□ -0.62
COL4A1-201ENST00000375820 AGMATQ9BSE5 352 aa11.21□□□□□ -0.62
COL4A1-201ENST00000375820 F8WEM9 126 aa11.21□□□□□ -0.62
COL4A1-201ENST00000375820 GHRHP01286 108 aa11.21□□□□□ -0.62
COL4A1-201ENST00000375820 ESDP10768 282 aa11.21□□□□□ -0.62
COL4A1-201ENST00000375820 CD59P13987 128 aa11.21□□□□□ -0.62
COL4A1-201ENST00000375820 Q0VFX4 171 aa11.21□□□□□ -0.62
COL4A1-201ENST00000375820 SUMO4Q6EEV6 95 aa11.21□□□□□ -0.62
COL4A1-201ENST00000375820 FAM166AQ6J272 317 aa11.21□□□□□ -0.62
COL4A1-201ENST00000375820 GLRX5Q86SX6 157 aa11.21□□□□□ -0.62
COL4A1-201ENST00000375820 RBBP6Q7Z6E9 1792 aaKnown RBP11.21□□□□□ -0.62
COL4A1-201ENST00000375820 LINC00473A8K010 186 aa11.2□□□□□ -0.62
COL4A1-201ENST00000375820 AMN1Q8IY45 258 aa11.2□□□□□ -0.62
COL4A1-201ENST00000375820 LINC00479Q96M42 142 aa11.2□□□□□ -0.62
COL4A1-201ENST00000375820 EFNA4P52798 201 aa11.2□□□□□ -0.62
COL4A1-201ENST00000375820 HIST3H2BBQ8N257 126 aa11.2□□□□□ -0.62
COL4A1-201ENST00000375820 ZNF114Q8NC26 417 aa11.2□□□□□ -0.62
COL4A1-201ENST00000375820 LGALS1P09382 135 aaKnown RBP11.2□□□□□ -0.62
COL4A1-201ENST00000375820 NTF4P34130 210 aa11.2□□□□□ -0.62
COL4A1-201ENST00000375820 RPL32P62910 135 aaKnown RBP11.2□□□□□ -0.62
COL4A1-201ENST00000375820 KLK9Q9UKQ9 250 aa11.2□□□□□ -0.62
COL4A1-201ENST00000375820 H0YJW9 148 aa11.19□□□□□ -0.62
COL4A1-201ENST00000375820 COL24A1Q17RW2 1714 aa11.19□□□□□ -0.62
COL4A1-201ENST00000375820 GTSF1LQ9H1H1 148 aa11.19□□□□□ -0.62
COL4A1-201ENST00000375820 TNS1Q9HBL0 1735 aaKnown RBP11.19□□□□□ -0.62
COL4A1-201ENST00000375820 PSME4Q14997 1843 aa11.19□□□□□ -0.62
COL4A1-201ENST00000375820 CRYGSP22914 178 aa11.19□□□□□ -0.62
COL4A1-201ENST00000375820 SDK2Q58EX2 2172 aa11.19□□□□□ -0.62
COL4A1-201ENST00000375820 A0A1B0GWJ7 208 aa11.19□□□□□ -0.62
COL4A1-201ENST00000375820 IGKV1-5P01602 117 aa11.19□□□□□ -0.62
COL4A1-201ENST00000375820 ASPHD1Q5U4P2 390 aa11.19□□□□□ -0.62
COL4A1-201ENST00000375820 FAM90A2PQ658T7 463 aa11.19□□□□□ -0.62
COL4A1-201ENST00000375820 BPESC1Q9GZL8 116 aa11.19□□□□□ -0.62
COL4A1-201ENST00000375820 XCL2Q9UBD3 114 aa11.19□□□□□ -0.62
COL4A1-201ENST00000375820 LOC102723996A0A087X1L8 192 aa11.19□□□□□ -0.62
COL4A1-201ENST00000375820 A0A096LPF7 62 aa11.19□□□□□ -0.62
COL4A1-201ENST00000375820 MST1P26927 711 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms