RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CDC42EP3Q9UKI2 254 aa11.18□□□□□ -0.62
MSH5-202ENST00000375740 C22orf46C9J442 243 aa11.17□□□□□ -0.62
MSH5-202ENST00000375740 OR7C2O60412 319 aa11.17□□□□□ -0.62
MSH5-202ENST00000375740 LIPFP07098 398 aa11.17□□□□□ -0.62
MSH5-202ENST00000375740 C11orf71Q6IPW1 123 aa11.17□□□□□ -0.62
MSH5-202ENST00000375740 PQLC2Q6ZP29 291 aa11.17□□□□□ -0.62
MSH5-202ENST00000375740 RPEQ96AT9 228 aa11.17□□□□□ -0.62
MSH5-202ENST00000375740 SPOCK3Q9BQ16 436 aa11.17□□□□□ -0.62
MSH5-202ENST00000375740 SLC25A33Q9BSK2 321 aa11.17□□□□□ -0.62
MSH5-202ENST00000375740 CSTL1Q9H114 145 aa11.17□□□□□ -0.62
MSH5-202ENST00000375740 SIGLEC9Q9Y336 463 aa11.17□□□□□ -0.62
MSH5-202ENST00000375740 SELENOKQ9Y6D0 94 aa11.17□□□□□ -0.62
MSH5-202ENST00000375740 NBASA2RRP1 2371 aa11.17□□□□□ -0.62
MSH5-202ENST00000375740 TAX1BP3O14907 124 aa11.17□□□□□ -0.62
MSH5-202ENST00000375740 ZZEF1O43149 2961 aa11.17□□□□□ -0.62
MSH5-202ENST00000375740 APELAP0DMC3 54 aa11.17□□□□□ -0.62
MSH5-202ENST00000375740 IGKV1D-37A0A075B6S9 117 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 TRAV9-2A0A087WT02 112 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 TRBV9A0A0B4J1U6 114 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 TRAV5A0A0B4J249 113 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 PSMB11A5LHX3 300 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 LY6LH3BQJ8 138 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 OR10J4P0C629 311 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 C8orf88P0DMB2 117 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 AREGP15514 252 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 RPL27AP46776 148 aaKnown RBP11.16□□□□□ -0.62
MSH5-202ENST00000375740 TAS2R45P59539 299 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 CENPWQ5EE01 88 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 MORN5Q5VZ52 161 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 C18orf32Q8TCD1 76 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 C11orf52Q96A22 123 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 TIMD4Q96H15 378 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 CRYBB3P26998 211 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 MFAP2P55001 183 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 ARF6P62330 175 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 RHOGP84095 191 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 AMMECR1LQ6DCA0 310 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 C19orf35Q6ZS72 473 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 SMIM15Q7Z3B0 74 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 FAM168AQ92567 244 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 AMMECR1Q9Y4X0 333 aaPredicted RBP11.16□□□□□ -0.62
MSH5-202ENST00000375740 NAV3Q8IVL0 2385 aa11.16□□□□□ -0.62
MSH5-202ENST00000375740 TCRBV4S1A1TA0A5B7 111 aa11.15□□□□□ -0.62
MSH5-202ENST00000375740 RPL19P84098 196 aaKnown RBP11.15□□□□□ -0.62
MSH5-202ENST00000375740 RUSC1-AS1Q66K80 236 aa11.15□□□□□ -0.62
MSH5-202ENST00000375740 CHODLQ9H9P2 273 aa11.15□□□□□ -0.62
MSH5-202ENST00000375740 COL6A6A6NMZ7 2263 aa11.15□□□□□ -0.62
MSH5-202ENST00000375740 TPRP12270 2363 aaKnown RBP11.15□□□□□ -0.62
MSH5-202ENST00000375740 DCHS2Q6V1P9 2916 aa11.15□□□□□ -0.62
MSH5-202ENST00000375740 PPP1R27Q86WC6 154 aa11.15□□□□□ -0.62
MSH5-202ENST00000375740 THAP8Q8NA92 274 aa11.15□□□□□ -0.62
MSH5-202ENST00000375740 NEU4Q8WWR8 484 aaPredicted RBP11.15□□□□□ -0.62
MSH5-202ENST00000375740 SLC25A2Q9BXI2 301 aa11.15□□□□□ -0.62
MSH5-202ENST00000375740 FBXL15Q9H469 300 aa11.15□□□□□ -0.62
MSH5-202ENST00000375740 ARL2-SNX15V9GYD0 113 aa11.15□□□□□ -0.62
MSH5-202ENST00000375740 ARHGAP32A7KAX9 2087 aa11.15□□□□□ -0.63
MSH5-202ENST00000375740 FAM181BA6NEQ2 426 aa11.14□□□□□ -0.63
MSH5-202ENST00000375740 C9JCJ5 164 aa11.14□□□□□ -0.63
MSH5-202ENST00000375740 PATE2Q6UY27 113 aa11.14□□□□□ -0.63
MSH5-202ENST00000375740 FAM167A-AS1Q96KT0 104 aa11.14□□□□□ -0.63
MSH5-202ENST00000375740 SSBP3Q9BWW4 388 aaPredicted RBP11.14□□□□□ -0.63
MSH5-202ENST00000375740 MRPL32Q9BYC8 188 aaKnown RBP11.14□□□□□ -0.63
MSH5-202ENST00000375740 CLEC5AQ9NY25 188 aa11.14□□□□□ -0.63
MSH5-202ENST00000375740 SH2D7A6NKC9 451 aaPredicted RBP11.14□□□□□ -0.63
MSH5-202ENST00000375740 TMEM238C9JI98 176 aa11.14□□□□□ -0.63
MSH5-202ENST00000375740 COX7A2P2O60397 106 aa11.14□□□□□ -0.63
MSH5-202ENST00000375740 NUDT3O95989 172 aa11.14□□□□□ -0.63
MSH5-202ENST00000375740 GPR6P46095 362 aaPredicted RBP11.14□□□□□ -0.63
MSH5-202ENST00000375740 GNG4P50150 75 aa11.14□□□□□ -0.63
MSH5-202ENST00000375740 PVRIGQ6DKI7 326 aa11.14□□□□□ -0.63
MSH5-202ENST00000375740 WDR73Q6P4I2 378 aa11.14□□□□□ -0.63
MSH5-202ENST00000375740 NHLRC2Q8NBF2 726 aa11.14□□□□□ -0.63
MSH5-202ENST00000375740 SERTAD4Q9NUC0 356 aa11.14□□□□□ -0.63
MSH5-202ENST00000375740 HELTA6NFD8 242 aa11.13□□□□□ -0.63
MSH5-202ENST00000375740 C2orf70A6NJV1 201 aa11.13□□□□□ -0.63
MSH5-202ENST00000375740 APCSP02743 223 aa11.13□□□□□ -0.63
MSH5-202ENST00000375740 MT-ND6P03923 174 aa11.13□□□□□ -0.63
MSH5-202ENST00000375740 CRYGCP07315 174 aa11.13□□□□□ -0.63
MSH5-202ENST00000375740 PMCHL1Q16048 86 aa11.13□□□□□ -0.63
MSH5-202ENST00000375740 C10orf113Q5VZT2 155 aa11.13□□□□□ -0.63
MSH5-202ENST00000375740 CLEC2AQ6UVW9 174 aa11.13□□□□□ -0.63
MSH5-202ENST00000375740 MUC21A0A0G2JKD1 596 aa11.13□□□□□ -0.63
MSH5-202ENST00000375740 MUC21A0A140T8X8 626 aa11.13□□□□□ -0.63
MSH5-202ENST00000375740 AMY1AP04745 511 aa11.13□□□□□ -0.63
MSH5-202ENST00000375740 RIPPLY3P57055 190 aa11.13□□□□□ -0.63
MSH5-202ENST00000375740 MUC21Q5SSG8 566 aa11.13□□□□□ -0.63
MSH5-202ENST00000375740 GDF5OSQ5U4N7 250 aa11.13□□□□□ -0.63
MSH5-202ENST00000375740 PRORYQ9H606 182 aa11.13□□□□□ -0.63
MSH5-202ENST00000375740 IGHV3-21A0A0B4J1V1 117 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 A0A1W2PPR1 153 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 GGTLC3B5MD39 225 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 M0R2Z0 102 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 TIMM23O14925 209 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 SAP30O75446 220 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 HSBP1O75506 76 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 TMEM11P17152 192 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 OR1L4Q8NGR5 311 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 IGFBPL1Q8WX77 278 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 NUDT11Q96G61 164 aa11.12□□□□□ -0.63
MSH5-202ENST00000375740 ZNF355PQ9NSJ1 428 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms