RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 KLHDC1Q8N7A1 406 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 HIGD1AQ9Y241 93 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 GOLT1BQ9Y3E0 138 aa11.61□□□□□ -0.55
MSH5-201ENST00000375703 BUB1B-PAK6H3BSN5 160 aa11.6□□□□□ -0.55
MSH5-201ENST00000375703 DLEU1O43261 78 aa11.6□□□□□ -0.55
MSH5-201ENST00000375703 HBBP68871 147 aa11.6□□□□□ -0.55
MSH5-201ENST00000375703 PMCHL1Q16048 86 aa11.6□□□□□ -0.55
MSH5-201ENST00000375703 PRR31Q5SQ13 230 aa11.6□□□□□ -0.55
MSH5-201ENST00000375703 Q6ZN92 141 aa11.6□□□□□ -0.55
MSH5-201ENST00000375703 Q8NA96 180 aa11.6□□□□□ -0.55
MSH5-201ENST00000375703 FAM181BA6NEQ2 426 aa11.6□□□□□ -0.55
MSH5-201ENST00000375703 PSG1P11464 419 aa11.6□□□□□ -0.55
MSH5-201ENST00000375703 LYZP61626 148 aa11.6□□□□□ -0.55
MSH5-201ENST00000375703 PGLYRP4Q96LB8 373 aa11.6□□□□□ -0.55
MSH5-201ENST00000375703 TTC28Q96AY4 2481 aa11.6□□□□□ -0.55
MSH5-201ENST00000375703 C19orf71A6NCJ1 209 aa11.59□□□□□ -0.55
MSH5-201ENST00000375703 TEX22C9J3V5 150 aa11.59□□□□□ -0.55
MSH5-201ENST00000375703 LYNX1G3V0Z9 82 aa11.59□□□□□ -0.55
MSH5-201ENST00000375703 LYNX1P0DP58 116 aa11.59□□□□□ -0.55
MSH5-201ENST00000375703 COL5A1-AS1Q5SY13 56 aa11.59□□□□□ -0.55
MSH5-201ENST00000375703 EBLN2Q6P2I7 272 aa11.59□□□□□ -0.55
MSH5-201ENST00000375703 ZGRF1Q86YA3 2104 aa11.59□□□□□ -0.55
MSH5-201ENST00000375703 GTSF1Q8WW33 167 aa11.59□□□□□ -0.55
MSH5-201ENST00000375703 FBXL15Q9H469 300 aa11.59□□□□□ -0.55
MSH5-201ENST00000375703 ZNF492Q9P255 531 aa11.59□□□□□ -0.55
MSH5-201ENST00000375703 CT83Q5H943 113 aa11.59□□□□□ -0.55
MSH5-201ENST00000375703 B9A039 149 aa11.59□□□□□ -0.55
MSH5-201ENST00000375703 PAX2Q02962 417 aa11.59□□□□□ -0.55
MSH5-201ENST00000375703 MAJINQ3KP22 176 aa11.59□□□□□ -0.55
MSH5-201ENST00000375703 MAP1BP46821 2468 aaKnown RBP11.58□□□□□ -0.56
MSH5-201ENST00000375703 IGLC1P0CG04 106 aa11.58□□□□□ -0.56
MSH5-201ENST00000375703 COX7A1P24310 79 aa11.58□□□□□ -0.56
MSH5-201ENST00000375703 TFPI2P48307 235 aa11.58□□□□□ -0.56
MSH5-201ENST00000375703 HNRNPA3P51991 378 aaKnown RBP11.58□□□□□ -0.56
MSH5-201ENST00000375703 Q56UQ5 140 aa11.58□□□□□ -0.56
MSH5-201ENST00000375703 OR8B3Q8NGG8 313 aa11.58□□□□□ -0.56
MSH5-201ENST00000375703 RPEQ96AT9 228 aa11.58□□□□□ -0.56
MSH5-201ENST00000375703 OR8B2Q96RD0 313 aa11.58□□□□□ -0.56
MSH5-201ENST00000375703 SLC25A39Q9BZJ4 359 aaPredicted RBP11.58□□□□□ -0.56
MSH5-201ENST00000375703 SOX21Q9Y651 276 aaPredicted RBP11.58□□□□□ -0.56
MSH5-201ENST00000375703 PKDREJQ9NTG1 2253 aa11.58□□□□□ -0.56
MSH5-201ENST00000375703 RBP4P02753 201 aa11.58□□□□□ -0.56
MSH5-201ENST00000375703 CD24P25063 80 aa11.58□□□□□ -0.56
MSH5-201ENST00000375703 PLGLAQ15195 96 aa11.58□□□□□ -0.56
MSH5-201ENST00000375703 FAM162BQ5T6X4 162 aa11.58□□□□□ -0.56
MSH5-201ENST00000375703 SRSF12Q8WXF0 261 aaKnown RBP11.58□□□□□ -0.56
MSH5-201ENST00000375703 OTORQ9NRC9 128 aa11.58□□□□□ -0.56
MSH5-201ENST00000375703 PPIAL4CA0A0B4J2A2 164 aa11.57□□□□□ -0.56
MSH5-201ENST00000375703 C2orf70A6NJV1 201 aa11.57□□□□□ -0.56
MSH5-201ENST00000375703 PPIAL4GP0DN37 164 aa11.57□□□□□ -0.56
MSH5-201ENST00000375703 FOXA3P55318 350 aaPredicted RBP11.57□□□□□ -0.56
MSH5-201ENST00000375703 GAGE1Q13065 139 aa11.57□□□□□ -0.56
MSH5-201ENST00000375703 RBPMS2Q6ZRY4 209 aaKnown RBP11.57□□□□□ -0.56
MSH5-201ENST00000375703 RASL11BQ9BPW5 248 aa11.57□□□□□ -0.56
MSH5-201ENST00000375703 GFRA4Q9GZZ7 299 aa11.57□□□□□ -0.56
MSH5-201ENST00000375703 CUL9Q8IWT3 2517 aa11.57□□□□□ -0.56
MSH5-201ENST00000375703 TRAV8-1A0A0A6YYK1 113 aa11.57□□□□□ -0.56
MSH5-201ENST00000375703 I3L2K1 104 aa11.57□□□□□ -0.56
MSH5-201ENST00000375703 CD3EP07766 207 aa11.57□□□□□ -0.56
MSH5-201ENST00000375703 EXOC3-AS1Q8N2X6 119 aa11.57□□□□□ -0.56
MSH5-201ENST00000375703 URB1-AS1Q96HZ7 61 aa11.57□□□□□ -0.56
MSH5-201ENST00000375703 LAMTOR2Q9Y2Q5 125 aa11.57□□□□□ -0.56
MSH5-201ENST00000375703 COL8A1P27658 744 aa11.56□□□□□ -0.56
MSH5-201ENST00000375703 PRR30Q53SZ7 412 aaPredicted RBP11.56□□□□□ -0.56
MSH5-201ENST00000375703 PRNTQ86SH4 94 aa11.56□□□□□ -0.56
MSH5-201ENST00000375703 CIARTQ8N365 385 aaPredicted RBP11.56□□□□□ -0.56
MSH5-201ENST00000375703 TMEM14CQ9P0S9 112 aa11.56□□□□□ -0.56
MSH5-201ENST00000375703 TRAV9-2A0A087WT02 112 aa11.56□□□□□ -0.56
MSH5-201ENST00000375703 TOX4O94842 621 aa11.56□□□□□ -0.56
MSH5-201ENST00000375703 CNIH1O95406 144 aa11.56□□□□□ -0.56
MSH5-201ENST00000375703 RBPJQ06330 500 aa11.56□□□□□ -0.56
MSH5-201ENST00000375703 PCNX1Q96RV3 2341 aa11.55□□□□□ -0.56
MSH5-201ENST00000375703 ADGRG4Q8IZF6 3080 aa11.55□□□□□ -0.56
MSH5-201ENST00000375703 DMRTA1Q5VZB9 504 aa11.55□□□□□ -0.56
MSH5-201ENST00000375703 GOLT1AQ6ZVE7 132 aa11.55□□□□□ -0.56
MSH5-201ENST00000375703 KIR3DL3Q8N743 410 aa11.55□□□□□ -0.56
MSH5-201ENST00000375703 CLEC5AQ9NY25 188 aa11.55□□□□□ -0.56
MSH5-201ENST00000375703 AKAP13Q12802 2813 aa11.55□□□□□ -0.56
MSH5-201ENST00000375703 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.55□□□□□ -0.56
MSH5-201ENST00000375703 FAM231BA6NCW3 169 aa11.55□□□□□ -0.56
MSH5-201ENST00000375703 M0QZ24 198 aa11.55□□□□□ -0.56
MSH5-201ENST00000375703 TCF15Q12870 199 aa11.55□□□□□ -0.56
MSH5-201ENST00000375703 Q86TA4 180 aa11.55□□□□□ -0.56
MSH5-201ENST00000375703 STPG4Q8N801 248 aa11.55□□□□□ -0.56
MSH5-201ENST00000375703 NPIPB6E9PJ23 425 aa11.54□□□□□ -0.56
MSH5-201ENST00000375703 CHEK1O14757 476 aa11.54□□□□□ -0.56
MSH5-201ENST00000375703 RNF5Q99942 180 aa11.54□□□□□ -0.56
MSH5-201ENST00000375703 TMEM70Q9BUB7 260 aa11.54□□□□□ -0.56
MSH5-201ENST00000375703 BSNQ9UPA5 3926 aa11.54□□□□□ -0.56
MSH5-201ENST00000375703 SH2D7A6NKC9 451 aaPredicted RBP11.54□□□□□ -0.56
MSH5-201ENST00000375703 IGKV1-17P01599 117 aa11.54□□□□□ -0.56
MSH5-201ENST00000375703 IGLV2-11P01706 119 aa11.54□□□□□ -0.56
MSH5-201ENST00000375703 TSPOP30536 169 aa11.54□□□□□ -0.56
MSH5-201ENST00000375703 KALRNO60229 2985 aa11.54□□□□□ -0.56
MSH5-201ENST00000375703 C20orf202A1L168 122 aa11.53□□□□□ -0.56
MSH5-201ENST00000375703 CHCHD1Q96BP2 118 aaKnown RBP11.53□□□□□ -0.56
MSH5-201ENST00000375703 ZFP30Q9Y2G7 519 aa11.53□□□□□ -0.56
MSH5-201ENST00000375703 LY6LH3BQJ8 138 aa11.53□□□□□ -0.56
MSH5-201ENST00000375703 LINC00614P0C842 121 aa11.53□□□□□ -0.56
MSH5-201ENST00000375703 IGLL1P15814 213 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms