RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 ERVK-16P61578 105 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 ECSCRQ19T08 205 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 BPIFA4PQ86YQ2 179 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 CCL4L1Q8NHW4 92 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 ZNF799Q96GE5 643 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 DOCK7Q96N67 2140 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 AGPAT4-IT1Q9H0P7 198 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 PRO0461Q9UI25 63 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 EXPH5Q8NEV8 1989 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 NXPH3O95157 252 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 ZNF136P52737 540 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 PAX8Q06710 450 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 DEFB134Q4QY38 66 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 SLC25A38Q96DW6 304 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 CLEC7AQ9BXN2 247 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 MPC1Q9Y5U8 109 aa6.31□□□□□ -1.4
USP48-203ENST00000374732 C3orf85A0A1B0GTC6 90 aa6.3□□□□□ -1.4
USP48-203ENST00000374732 PRRG2O14669 202 aa6.3□□□□□ -1.4
USP48-203ENST00000374732 RRHO14718 337 aa6.3□□□□□ -1.4
USP48-203ENST00000374732 SRSF10O75494 262 aaKnown RBP6.3□□□□□ -1.4
USP48-203ENST00000374732 GHRHP01286 108 aa6.3□□□□□ -1.4
USP48-203ENST00000374732 CD7P09564 240 aa6.3□□□□□ -1.4
USP48-203ENST00000374732 RBMY1CP0DJD4 496 aa6.3□□□□□ -1.4
USP48-203ENST00000374732 MLANAQ16655 118 aa6.3□□□□□ -1.4
USP48-203ENST00000374732 STPG1Q5TH74 334 aa6.3□□□□□ -1.4
USP48-203ENST00000374732 DGAT2L6Q6ZPD8 337 aa6.3□□□□□ -1.4
USP48-203ENST00000374732 C11orf53Q8IXP5 236 aa6.3□□□□□ -1.4
USP48-203ENST00000374732 PLA2G12AQ9BZM1 189 aa6.3□□□□□ -1.4
USP48-203ENST00000374732 C11orf68Q9H3H3 251 aaKnown RBP6.3□□□□□ -1.4
USP48-203ENST00000374732 ZNF256Q9Y2P7 627 aaPredicted RBP6.3□□□□□ -1.4
USP48-203ENST00000374732 MKI67P46013 3256 aaKnown RBP6.3□□□□□ -1.4
USP48-203ENST00000374732 SPTY2D1-AS1A0A0U1RR47 76 aa6.3□□□□□ -1.4
USP48-203ENST00000374732 CPSF4LA6NMK7 179 aaKnown RBP6.3□□□□□ -1.4
USP48-203ENST00000374732 IGHV4-34P06331 123 aa6.3□□□□□ -1.4
USP48-203ENST00000374732 TMEM70Q9BUB7 260 aa6.3□□□□□ -1.4
USP48-203ENST00000374732 C6orf106Q9H6K1 298 aaPredicted RBP6.3□□□□□ -1.4
USP48-203ENST00000374732 X6R8D5 127 aa6.3□□□□□ -1.4
USP48-203ENST00000374732 SCN2AQ99250 2005 aa6.29□□□□□ -1.4
USP48-203ENST00000374732 WISP2O76076 250 aa6.29□□□□□ -1.4
USP48-203ENST00000374732 CRYGAP11844 174 aa6.29□□□□□ -1.4
USP48-203ENST00000374732 HBG1P69891 147 aa6.29□□□□□ -1.4
USP48-203ENST00000374732 Q8N1Y9 231 aa6.29□□□□□ -1.4
USP48-203ENST00000374732 PRSS27Q9BQR3 290 aa6.29□□□□□ -1.4
USP48-203ENST00000374732 FOXQ1Q9C009 403 aa6.29□□□□□ -1.4
USP48-203ENST00000374732 MYO9BQ13459 2157 aa6.29□□□□□ -1.4
USP48-203ENST00000374732 hADV29S1A0JD25 119 aa6.29□□□□□ -1.4
USP48-203ENST00000374732 J3QRE1 110 aa6.29□□□□□ -1.4
USP48-203ENST00000374732 GYPAP02724 150 aa6.29□□□□□ -1.4
USP48-203ENST00000374732 SMIM13P0DJ93 91 aa6.29□□□□□ -1.4
USP48-203ENST00000374732 PYYP10082 97 aa6.29□□□□□ -1.4
USP48-203ENST00000374732 ASIPP42127 132 aa6.29□□□□□ -1.4
USP48-203ENST00000374732 IGLV3-21P80748 117 aaPredicted RBP6.29□□□□□ -1.4
USP48-203ENST00000374732 CENPWQ5EE01 88 aa6.29□□□□□ -1.4
USP48-203ENST00000374732 MRPL30Q8TCC3 161 aaKnown RBP6.29□□□□□ -1.4
USP48-203ENST00000374732 GTSF1Q8WW33 167 aa6.29□□□□□ -1.4
USP48-203ENST00000374732 C5orf49A4QMS7 147 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 ZNF324O75467 553 aaPredicted RBP6.28□□□□□ -1.4
USP48-203ENST00000374732 UBE2G1P62253 170 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 RPL18AQ02543 176 aaKnown RBP6.28□□□□□ -1.4
USP48-203ENST00000374732 UNQ9165/PRO28630Q6UXU0 137 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 Q6ZRU5 148 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 C16orf95Q9H693 158 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 PPP1R3DO95685 299 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 CLDN17P56750 224 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 CACNG7P62955 275 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 HES3Q5TGS1 186 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 AMTNQ6UX39 209 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 TMEM136Q6ZRR5 245 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 RNF182Q8N6D2 247 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 OR2W1Q9Y3N9 320 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 TRAV8-1A0A0A6YYK1 113 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 TCL1BO95988 128 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.28□□□□□ -1.4
USP48-203ENST00000374732 MRPL2Q5T653 305 aaKnown RBP6.28□□□□□ -1.4
USP48-203ENST00000374732 TMEM255BQ8WV15 326 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 LINC00479Q96M42 142 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 SHANK2-AS3Q9BTD1 123 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 SDF2L1Q9HCN8 221 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 ANAPC10Q9UM13 185 aa6.28□□□□□ -1.4
USP48-203ENST00000374732 CACNA1IQ9P0X4 2223 aa6.27□□□□□ -1.4
USP48-203ENST00000374732 TRBV6-7A0A0A0MS04 114 aa6.27□□□□□ -1.41
USP48-203ENST00000374732 MED19A0JLT2 244 aaPredicted RBP6.27□□□□□ -1.41
USP48-203ENST00000374732 F2Z2F3 143 aa6.27□□□□□ -1.41
USP48-203ENST00000374732 ANGPTL7O43827 346 aa6.27□□□□□ -1.41
USP48-203ENST00000374732 GPR137BO60478 399 aa6.27□□□□□ -1.41
USP48-203ENST00000374732 ASAH2BP0C7U1 165 aa6.27□□□□□ -1.41
USP48-203ENST00000374732 LOXL1Q08397 574 aaPredicted RBP6.27□□□□□ -1.41
USP48-203ENST00000374732 LINC00114Q6XXX2 140 aa6.27□□□□□ -1.41
USP48-203ENST00000374732 C2orf91Q6ZV80 131 aa6.27□□□□□ -1.41
USP48-203ENST00000374732 TMEM52Q8NDY8 209 aa6.27□□□□□ -1.41
USP48-203ENST00000374732 TMEM131Q92545 1883 aa6.27□□□□□ -1.41
USP48-203ENST00000374732 KIAA2026Q5HYC2 2103 aa6.27□□□□□ -1.41
USP48-203ENST00000374732 LAMA2P24043 3122 aaKnown RBP6.27□□□□□ -1.41
USP48-203ENST00000374732 HLA-DPB1P04440 258 aa6.27□□□□□ -1.41
USP48-203ENST00000374732 OR8B2Q96RD0 313 aa6.27□□□□□ -1.41
USP48-203ENST00000374732 TNRC6BQ9UPQ9 1833 aaKnown RBP6.27□□□□□ -1.41
USP48-203ENST00000374732 hDV102S1A0JD36 115 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 SFTPDP35247 375 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 PLA2G2CQ5R387 149 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 MORN3Q6PF18 240 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms