RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 LY6LH3BQJ8 138 aa11.12□□□□□ -0.63
HMGCL-203ENST00000374490 BMPR1BO00238 502 aa11.12□□□□□ -0.63
HMGCL-203ENST00000374490 TOMM40O96008 361 aa11.12□□□□□ -0.63
HMGCL-203ENST00000374490 PLAUP00749 431 aa11.12□□□□□ -0.63
HMGCL-203ENST00000374490 LIPFP07098 398 aa11.12□□□□□ -0.63
HMGCL-203ENST00000374490 GP9P14770 177 aa11.12□□□□□ -0.63
HMGCL-203ENST00000374490 TOMM20LQ6UXN7 152 aa11.12□□□□□ -0.63
HMGCL-203ENST00000374490 LY6G5BQ8NDX9 201 aa11.12□□□□□ -0.63
HMGCL-203ENST00000374490 NUDT10Q8NFP7 164 aa11.12□□□□□ -0.63
HMGCL-203ENST00000374490 NUDT11Q96G61 164 aa11.12□□□□□ -0.63
HMGCL-203ENST00000374490 GPR82Q96P67 336 aa11.12□□□□□ -0.63
HMGCL-203ENST00000374490 C20orf144Q9BQM9 153 aa11.12□□□□□ -0.63
HMGCL-203ENST00000374490 C7orf69Q9H7B7 122 aa11.12□□□□□ -0.63
HMGCL-203ENST00000374490 SOX21Q9Y651 276 aaPredicted RBP11.12□□□□□ -0.63
HMGCL-203ENST00000374490 CELSR2Q9HCU4 2923 aa11.11□□□□□ -0.63
HMGCL-203ENST00000374490 PGPA6NDG6 321 aa11.11□□□□□ -0.63
HMGCL-203ENST00000374490 ZNF253O75346 499 aa11.11□□□□□ -0.63
HMGCL-203ENST00000374490 IGHV3-48P01763 117 aa11.11□□□□□ -0.63
HMGCL-203ENST00000374490 GPX1P07203 203 aa11.11□□□□□ -0.63
HMGCL-203ENST00000374490 SRSF12Q8WXF0 261 aaKnown RBP11.11□□□□□ -0.63
HMGCL-203ENST00000374490 OTORQ9NRC9 128 aa11.11□□□□□ -0.63
HMGCL-203ENST00000374490 RNF24Q9Y225 148 aa11.11□□□□□ -0.63
HMGCL-203ENST00000374490 CENPEQ02224 2701 aa11.11□□□□□ -0.63
HMGCL-203ENST00000374490 SIAH2O43255 324 aa11.1□□□□□ -0.63
HMGCL-203ENST00000374490 SPINK4O60575 86 aa11.1□□□□□ -0.63
HMGCL-203ENST00000374490 FRMD6-AS1P0C7T7 363 aa11.1□□□□□ -0.63
HMGCL-203ENST00000374490 COX7A1P24310 79 aa11.1□□□□□ -0.63
HMGCL-203ENST00000374490 CNTFRP26992 372 aa11.1□□□□□ -0.63
HMGCL-203ENST00000374490 CEACAM3P40198 252 aa11.1□□□□□ -0.63
HMGCL-203ENST00000374490 TPTE2P1Q5T6R2 138 aa11.1□□□□□ -0.63
HMGCL-203ENST00000374490 FAM162BQ5T6X4 162 aa11.1□□□□□ -0.63
HMGCL-203ENST00000374490 NHLRC2Q8NBF2 726 aa11.1□□□□□ -0.63
HMGCL-203ENST00000374490 TIMD4Q96H15 378 aa11.1□□□□□ -0.63
HMGCL-203ENST00000374490 LINC00479Q96M42 142 aa11.1□□□□□ -0.63
HMGCL-203ENST00000374490 TMEM68Q96MH6 324 aa11.1□□□□□ -0.63
HMGCL-203ENST00000374490 RAB1BQ9H0U4 201 aa11.1□□□□□ -0.63
HMGCL-203ENST00000374490 ANKHD1Q8IWZ3 2542 aaKnown RBP11.1□□□□□ -0.63
HMGCL-203ENST00000374490 TRAV34A0A0B4J273 112 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 TRBV6-1A0A0K0K1D8 114 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 OR2J3O76001 311 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 IGLC1P0CG04 106 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 SRIP30626 198 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 KLF5Q13887 457 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-203ENST00000374490 PLGLAQ15195 96 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 ZNF600Q6ZNG1 722 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 S100A7AQ86SG5 101 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 BLNKQ8WV28 456 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 FBXL15Q9H469 300 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 RPP21Q9H633 154 aaKnown RBP11.09□□□□□ -0.63
HMGCL-203ENST00000374490 CSMD1Q96PZ7 3565 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 I3L2K1 104 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 M0R1W7 72 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 ZNF324O75467 553 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-203ENST00000374490 LTAP01374 205 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 AMTP48728 403 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 GNG5P63218 68 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 SLC35B1P78383 322 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 C19orf35Q6ZS72 473 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 OR11H6Q8NGC7 330 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 OR4B1Q8NGF8 309 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 RASL11BQ9BPW5 248 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 Q9H3A6 140 aa11.09□□□□□ -0.63
HMGCL-203ENST00000374490 CRYBG3Q68DQ2 2970 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 ROS1P08922 2347 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 A0A1B0GV90 55 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 A8MWL6 223 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 F2Z2F3 143 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 M0QZK8 103 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 M0R143 59 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 TCRAP04437 139 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 HTR1DP28221 377 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 LYZP61626 148 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 KIAA1644Q3SXP7 199 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 NUP35Q8NFH5 326 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 VAMP8Q9BV40 100 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 MLST8Q9BVC4 326 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 SSBP3Q9BWW4 388 aaPredicted RBP11.08□□□□□ -0.64
HMGCL-203ENST00000374490 GFRA4Q9GZZ7 299 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 DPM3Q9P2X0 92 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 ONECUT1Q9UBC0 465 aa11.08□□□□□ -0.64
HMGCL-203ENST00000374490 TBL2Q9Y4P3 447 aaKnown RBP11.08□□□□□ -0.64
HMGCL-203ENST00000374490 A0A1W2PS18 150 aa11.07□□□□□ -0.64
HMGCL-203ENST00000374490 FAM231BA6NCW3 169 aa11.07□□□□□ -0.64
HMGCL-203ENST00000374490 LYNX1G3V0Z9 82 aa11.07□□□□□ -0.64
HMGCL-203ENST00000374490 CA1P00915 261 aaPredicted RBP11.07□□□□□ -0.64
HMGCL-203ENST00000374490 LYNX1P0DP58 116 aa11.07□□□□□ -0.64
HMGCL-203ENST00000374490 PRR27Q6MZM9 219 aa11.07□□□□□ -0.64
HMGCL-203ENST00000374490 NEU4Q8WWR8 484 aaPredicted RBP11.07□□□□□ -0.64
HMGCL-203ENST00000374490 FAM168AQ92567 244 aa11.07□□□□□ -0.64
HMGCL-203ENST00000374490 NEU1Q99519 415 aa11.07□□□□□ -0.64
HMGCL-203ENST00000374490 MIEN1Q9BRT3 115 aa11.07□□□□□ -0.64
HMGCL-203ENST00000374490 WNT10AQ9GZT5 417 aa11.07□□□□□ -0.64
HMGCL-203ENST00000374490 NRN1Q9NPD7 142 aa11.07□□□□□ -0.64
HMGCL-203ENST00000374490 TNCP24821 2201 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 PKDREJQ9NTG1 2253 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 TRAV30A0A087WSZ9 112 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 A0A1B0GXF2 115 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 NBR2O15453 112 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 CNIH1O95406 144 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 P01737 135 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms