RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 VAMP8Q9BV40 100 aa12.4□□□□□ -0.42
TMEM50A-201ENST00000374358 ONECUT1Q9UBC0 465 aa12.4□□□□□ -0.42
TMEM50A-201ENST00000374358 SPTBN4Q9H254 2564 aa12.39□□□□□ -0.43
TMEM50A-201ENST00000374358 DIRC3C9JPN6 131 aa12.39□□□□□ -0.43
TMEM50A-201ENST00000374358 ZNF324O75467 553 aaPredicted RBP12.39□□□□□ -0.43
TMEM50A-201ENST00000374358 PSG1P11464 419 aa12.39□□□□□ -0.43
TMEM50A-201ENST00000374358 TMEM183BQ1AE95 376 aa12.39□□□□□ -0.43
TMEM50A-201ENST00000374358 ATOH7Q8N100 152 aa12.39□□□□□ -0.43
TMEM50A-201ENST00000374358 TRGV9Q99603 122 aa12.39□□□□□ -0.43
TMEM50A-201ENST00000374358 ZNF586Q9NXT0 402 aa12.39□□□□□ -0.43
TMEM50A-201ENST00000374358 VPS13CQ709C8 3753 aa12.39□□□□□ -0.43
TMEM50A-201ENST00000374358 B9A039 149 aa12.39□□□□□ -0.43
TMEM50A-201ENST00000374358 RPL19P84098 196 aaKnown RBP12.39□□□□□ -0.43
TMEM50A-201ENST00000374358 NIT1Q86X76 327 aa12.39□□□□□ -0.43
TMEM50A-201ENST00000374358 EXOC3-AS1Q8N2X6 119 aa12.39□□□□□ -0.43
TMEM50A-201ENST00000374358 WNT10AQ9GZT5 417 aa12.39□□□□□ -0.43
TMEM50A-201ENST00000374358 Q9H3A6 140 aa12.39□□□□□ -0.43
TMEM50A-201ENST00000374358 F11RQ9Y624 299 aaKnown RBP12.39□□□□□ -0.43
TMEM50A-201ENST00000374358 COL12A1Q99715 3063 aa12.38□□□□□ -0.43
TMEM50A-201ENST00000374358 NUTF2P61970 127 aaKnown RBP12.38□□□□□ -0.43
TMEM50A-201ENST00000374358 OR2D3Q8NGH3 330 aa12.38□□□□□ -0.43
TMEM50A-201ENST00000374358 C22orf15Q8WYQ4 148 aa12.38□□□□□ -0.43
TMEM50A-201ENST00000374358 GRAMD2BQ96HH9 432 aa12.38□□□□□ -0.43
TMEM50A-201ENST00000374358 HILPDAQ9Y5L2 63 aa12.38□□□□□ -0.43
TMEM50A-201ENST00000374358 M0QZ24 198 aa12.38□□□□□ -0.43
TMEM50A-201ENST00000374358 RBP4P02753 201 aa12.38□□□□□ -0.43
TMEM50A-201ENST00000374358 NBL1P41271 181 aa12.38□□□□□ -0.43
TMEM50A-201ENST00000374358 PRRX1P54821 245 aa12.38□□□□□ -0.43
TMEM50A-201ENST00000374358 CASP6P55212 293 aa12.38□□□□□ -0.43
TMEM50A-201ENST00000374358 ETFRF1Q6IPR1 90 aa12.38□□□□□ -0.43
TMEM50A-201ENST00000374358 FAM231DQ6ZW35 169 aa12.38□□□□□ -0.43
TMEM50A-201ENST00000374358 CHD8Q9HCK8 2581 aa12.38□□□□□ -0.43
TMEM50A-201ENST00000374358 M0R143 59 aa12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 TIMM23O14925 209 aa12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 IGLC1P0CG04 106 aa12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 RAB4AP20338 218 aa12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 G0S2P27469 103 aa12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 KLRD1Q13241 179 aa12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 LBHQ53QV2 105 aaPredicted RBP12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 KLF17Q5JT82 389 aaPredicted RBP12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 LCN12Q6JVE5 192 aa12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 C3orf79P0CE67 100 aa12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 BATFQ16520 125 aa12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 MAJINQ3KP22 176 aa12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 ZNF672Q499Z4 452 aaPredicted RBP12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 PVRIGQ6DKI7 326 aa12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 GTSF1Q8WW33 167 aa12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 CELSR1Q9NYQ6 3014 aa12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 NCOR2Q9Y618 2525 aa12.37□□□□□ -0.43
TMEM50A-201ENST00000374358 ARF6P62330 175 aa12.36□□□□□ -0.43
TMEM50A-201ENST00000374358 C17orf77Q96MU5 243 aa12.36□□□□□ -0.43
TMEM50A-201ENST00000374358 GPR82Q96P67 336 aa12.36□□□□□ -0.43
TMEM50A-201ENST00000374358 K7ENP7 123 aa12.36□□□□□ -0.43
TMEM50A-201ENST00000374358 TCAPO15273 167 aa12.36□□□□□ -0.43
TMEM50A-201ENST00000374358 TCRAP04437 139 aa12.36□□□□□ -0.43
TMEM50A-201ENST00000374358 HIST1H1EP10412 219 aaKnown RBP12.36□□□□□ -0.43
TMEM50A-201ENST00000374358 FOXA3P55318 350 aaPredicted RBP12.36□□□□□ -0.43
TMEM50A-201ENST00000374358 MMDQ15546 238 aa12.36□□□□□ -0.43
TMEM50A-201ENST00000374358 CIARTQ8N365 385 aaPredicted RBP12.36□□□□□ -0.43
TMEM50A-201ENST00000374358 VKORC1Q9BQB6 163 aa12.36□□□□□ -0.43
TMEM50A-201ENST00000374358 C20orf144Q9BQM9 153 aa12.36□□□□□ -0.43
TMEM50A-201ENST00000374358 MLST8Q9BVC4 326 aa12.36□□□□□ -0.43
TMEM50A-201ENST00000374358 CNIH1O95406 144 aa12.35□□□□□ -0.43
TMEM50A-201ENST00000374358 PMCHL1Q16048 86 aa12.35□□□□□ -0.43
TMEM50A-201ENST00000374358 BCL6BQ8N143 479 aaPredicted RBP12.35□□□□□ -0.43
TMEM50A-201ENST00000374358 C8orf46Q8TAG6 207 aa12.35□□□□□ -0.43
TMEM50A-201ENST00000374358 PGLYRP4Q96LB8 373 aa12.35□□□□□ -0.43
TMEM50A-201ENST00000374358 HIGD1AQ9Y241 93 aa12.35□□□□□ -0.43
TMEM50A-201ENST00000374358 SH2D7A6NKC9 451 aaPredicted RBP12.35□□□□□ -0.43
TMEM50A-201ENST00000374358 I3L2K1 104 aa12.35□□□□□ -0.43
TMEM50A-201ENST00000374358 RNASEKQ6P5S7 137 aaKnown RBP12.35□□□□□ -0.43
TMEM50A-201ENST00000374358 STXBP6Q8NFX7 210 aa12.35□□□□□ -0.43
TMEM50A-201ENST00000374358 MIEN1Q9BRT3 115 aa12.35□□□□□ -0.43
TMEM50A-201ENST00000374358 SLC25A39Q9BZJ4 359 aaPredicted RBP12.35□□□□□ -0.43
TMEM50A-201ENST00000374358 IGKV1-17P01599 117 aa12.34□□□□□ -0.43
TMEM50A-201ENST00000374358 SSTP61278 116 aa12.34□□□□□ -0.43
TMEM50A-201ENST00000374358 RBPJQ06330 500 aa12.34□□□□□ -0.43
TMEM50A-201ENST00000374358 COX19Q49B96 90 aa12.34□□□□□ -0.43
TMEM50A-201ENST00000374358 C5orf17Q8NAS9 161 aa12.34□□□□□ -0.43
TMEM50A-201ENST00000374358 TNFRSF14Q92956 283 aa12.34□□□□□ -0.43
TMEM50A-201ENST00000374358 KLF12Q9Y4X4 402 aa12.34□□□□□ -0.43
TMEM50A-201ENST00000374358 GOLT1AQ6ZVE7 132 aa12.34□□□□□ -0.43
TMEM50A-201ENST00000374358 WIPF2Q8TF74 440 aaPredicted RBP12.34□□□□□ -0.43
TMEM50A-201ENST00000374358 RASL11BQ9BPW5 248 aa12.34□□□□□ -0.43
TMEM50A-201ENST00000374358 RPP21Q9H633 154 aaKnown RBP12.34□□□□□ -0.43
TMEM50A-201ENST00000374358 LTAP01374 205 aa12.34□□□□□ -0.43
TMEM50A-201ENST00000374358 ALKBH7Q9BT30 221 aaPredicted RBP12.34□□□□□ -0.43
TMEM50A-201ENST00000374358 SPATA45Q537H7 98 aa12.33□□□□□ -0.44
TMEM50A-201ENST00000374358 PRNTQ86SH4 94 aa12.33□□□□□ -0.44
TMEM50A-201ENST00000374358 A0A1B0GXF2 115 aa12.33□□□□□ -0.44
TMEM50A-201ENST00000374358 K7EIM0 57 aa12.33□□□□□ -0.44
TMEM50A-201ENST00000374358 TOMM40O96008 361 aa12.33□□□□□ -0.44
TMEM50A-201ENST00000374358 P01737 135 aa12.33□□□□□ -0.44
TMEM50A-201ENST00000374358 LY6LH3BQJ8 138 aa12.32□□□□□ -0.44
TMEM50A-201ENST00000374358 HSBP1O75506 76 aa12.32□□□□□ -0.44
TMEM50A-201ENST00000374358 SSX8Q7RTT4 187 aa12.32□□□□□ -0.44
TMEM50A-201ENST00000374358 URB1-AS1Q96HZ7 61 aa12.32□□□□□ -0.44
TMEM50A-201ENST00000374358 CCL21O00585 134 aa12.32□□□□□ -0.44
TMEM50A-201ENST00000374358 Q86TA4 180 aa12.32□□□□□ -0.44
TMEM50A-201ENST00000374358 OR8B3Q8NGG8 313 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms