RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 IL4P05112 153 aa15.35■□□□□ 0.05
HDAC1-201ENST00000373548 FOXL1Q12952 345 aa15.35■□□□□ 0.05
HDAC1-201ENST00000373548 TMEM219Q86XT9 240 aa15.35■□□□□ 0.05
HDAC1-201ENST00000373548 SHANK2-AS3Q9BTD1 123 aa15.35■□□□□ 0.05
HDAC1-201ENST00000373548 C7orf69Q9H7B7 122 aa15.35■□□□□ 0.05
HDAC1-201ENST00000373548 FBXL7Q9UJT9 491 aa15.35■□□□□ 0.05
HDAC1-201ENST00000373548 VPS13CQ709C8 3753 aa15.34■□□□□ 0.05
HDAC1-201ENST00000373548 LINC01548A6NM66 108 aa15.34■□□□□ 0.05
HDAC1-201ENST00000373548 H3BRN7 92 aa15.34■□□□□ 0.05
HDAC1-201ENST00000373548 H3BTX0 84 aa15.34■□□□□ 0.05
HDAC1-201ENST00000373548 IGHV3-23P01764 117 aa15.34■□□□□ 0.05
HDAC1-201ENST00000373548 TAS2R60P59551 318 aa15.34■□□□□ 0.05
HDAC1-201ENST00000373548 GNG5P63218 68 aa15.34■□□□□ 0.05
HDAC1-201ENST00000373548 TCEAL7Q9BRU2 100 aa15.34■□□□□ 0.05
HDAC1-201ENST00000373548 MEGF9Q9H1U4 602 aa15.34■□□□□ 0.05
HDAC1-201ENST00000373548 PGPA6NDG6 321 aa15.34■□□□□ 0.05
HDAC1-201ENST00000373548 TYMSP04818 313 aa15.34■□□□□ 0.05
HDAC1-201ENST00000373548 TRGC1P0CF51 173 aa15.34■□□□□ 0.05
HDAC1-201ENST00000373548 CNN1P51911 297 aaKnown RBP15.34■□□□□ 0.05
HDAC1-201ENST00000373548 SLC17A3O00476 420 aa15.33■□□□□ 0.04
HDAC1-201ENST00000373548 GCGP01275 180 aa15.33■□□□□ 0.04
HDAC1-201ENST00000373548 SLC25A5P05141 298 aaKnown RBP15.33■□□□□ 0.04
HDAC1-201ENST00000373548 KLK9Q2XQG4 91 aa15.33■□□□□ 0.04
HDAC1-201ENST00000373548 KLK9Q9UKQ9 250 aa15.33■□□□□ 0.04
HDAC1-201ENST00000373548 EPDR1Q9UM22 224 aa15.33■□□□□ 0.04
HDAC1-201ENST00000373548 MOB4Q9Y3A3 225 aa15.33■□□□□ 0.04
HDAC1-201ENST00000373548 SOX21Q9Y651 276 aaPredicted RBP15.33■□□□□ 0.04
HDAC1-201ENST00000373548 B4DSR2 109 aa15.32■□□□□ 0.04
HDAC1-201ENST00000373548 HIST1H1BP16401 226 aaKnown RBP15.32■□□□□ 0.04
HDAC1-201ENST00000373548 ERVFC1-1P60608 527 aa15.32■□□□□ 0.04
HDAC1-201ENST00000373548 USF2Q15853 346 aaPredicted RBP15.32■□□□□ 0.04
HDAC1-201ENST00000373548 HIF1ANQ9NWT6 349 aa15.32■□□□□ 0.04
HDAC1-201ENST00000373548 ZNF586Q9NXT0 402 aa15.32■□□□□ 0.04
HDAC1-201ENST00000373548 TRAV34A0A0B4J273 112 aa15.32■□□□□ 0.04
HDAC1-201ENST00000373548 G3V318 75 aa15.32■□□□□ 0.04
HDAC1-201ENST00000373548 HIST1H1EP10412 219 aaKnown RBP15.32■□□□□ 0.04
HDAC1-201ENST00000373548 SLC25A16P16260 332 aa15.32■□□□□ 0.04
HDAC1-201ENST00000373548 NDUFA6P56556 154 aa15.32■□□□□ 0.04
HDAC1-201ENST00000373548 BCL6BQ8N143 479 aaPredicted RBP15.32■□□□□ 0.04
HDAC1-201ENST00000373548 Q9H3A6 140 aa15.32■□□□□ 0.04
HDAC1-201ENST00000373548 V9GYV3 84 aa15.32■□□□□ 0.04
HDAC1-201ENST00000373548 OR2T8A6NH00 312 aa15.31■□□□□ 0.04
HDAC1-201ENST00000373548 AMY1AP04745 511 aa15.31■□□□□ 0.04
HDAC1-201ENST00000373548 LINC00518Q8N0U6 118 aa15.31■□□□□ 0.04
HDAC1-201ENST00000373548 VN1R17PQ8TDU5 208 aa15.31■□□□□ 0.04
HDAC1-201ENST00000373548 TMEM68Q96MH6 324 aa15.31■□□□□ 0.04
HDAC1-201ENST00000373548 IL36BQ9NZH7 164 aa15.31■□□□□ 0.04
HDAC1-201ENST00000373548 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.31■□□□□ 0.043e-11■■■□□ 16.1
HDAC1-201ENST00000373548 ISLRO14498 428 aa15.31■□□□□ 0.04
HDAC1-201ENST00000373548 CTSGP08311 255 aa15.31■□□□□ 0.04
HDAC1-201ENST00000373548 FCGR2BP31994 310 aaPredicted RBP15.31■□□□□ 0.04
HDAC1-201ENST00000373548 NHLRC2Q8NBF2 726 aa15.31■□□□□ 0.04
HDAC1-201ENST00000373548 RNASE7Q9H1E1 156 aaKnown RBP15.31■□□□□ 0.04
HDAC1-201ENST00000373548 FBN2P35556 2912 aa15.3■□□□□ 0.04
HDAC1-201ENST00000373548 AVPP01185 164 aa15.3■□□□□ 0.04
HDAC1-201ENST00000373548 MGST1P10620 155 aaKnown RBP15.3■□□□□ 0.04
HDAC1-201ENST00000373548 C5orf17Q8NAS9 161 aa15.3■□□□□ 0.04
HDAC1-201ENST00000373548 TXN2Q99757 166 aa15.3■□□□□ 0.04
HDAC1-201ENST00000373548 OSTCQ9NRP0 149 aa15.3■□□□□ 0.04
HDAC1-201ENST00000373548 CELSR2Q9HCU4 2923 aa15.3■□□□□ 0.04
HDAC1-201ENST00000373548 ANKRD17O75179 2603 aaKnown RBP15.29■□□□□ 0.04
HDAC1-201ENST00000373548 A0A096LNT2 108 aa15.29■□□□□ 0.04
HDAC1-201ENST00000373548 TRBV9A0A0B4J1U6 114 aa15.29■□□□□ 0.04
HDAC1-201ENST00000373548 ZNF320A2RRD8 509 aa15.29■□□□□ 0.04
HDAC1-201ENST00000373548 HOXA5P20719 270 aa15.29■□□□□ 0.04
HDAC1-201ENST00000373548 RHOGP84095 191 aa15.29■□□□□ 0.04
HDAC1-201ENST00000373548 TMEM183BQ1AE95 376 aa15.29■□□□□ 0.04
HDAC1-201ENST00000373548 C15orf32Q32M92 178 aa15.29■□□□□ 0.04
HDAC1-201ENST00000373548 BPIFA4PQ86YQ2 179 aa15.29■□□□□ 0.04
HDAC1-201ENST00000373548 CHRDL1Q9BU40 450 aa15.29■□□□□ 0.04
HDAC1-201ENST00000373548 TRAV20A0A0B4J274 112 aa15.29■□□□□ 0.04
HDAC1-201ENST00000373548 ADMP35318 185 aa15.29■□□□□ 0.04
HDAC1-201ENST00000373548 BAGE2Q86Y30 109 aa15.29■□□□□ 0.04
HDAC1-201ENST00000373548 ZNF502Q8TBZ5 544 aa15.29■□□□□ 0.04
HDAC1-201ENST00000373548 BTF3L4Q96K17 158 aa15.29■□□□□ 0.04
HDAC1-201ENST00000373548 RPH3ALQ9UNE2 315 aa15.29■□□□□ 0.04
HDAC1-201ENST00000373548 KLF12Q9Y4X4 402 aa15.29■□□□□ 0.04
HDAC1-201ENST00000373548 CELSR1Q9NYQ6 3014 aa15.28■□□□□ 0.04
HDAC1-201ENST00000373548 ZNF98A6NK75 572 aa15.28■□□□□ 0.04
HDAC1-201ENST00000373548 MRPS12O15235 138 aaKnown RBP15.28■□□□□ 0.04
HDAC1-201ENST00000373548 IGLC2P0DOY2 106 aa15.28■□□□□ 0.04
HDAC1-201ENST00000373548 ACTL10Q5JWF8 245 aa15.28■□□□□ 0.04
HDAC1-201ENST00000373548 ATG101Q9BSB4 218 aa15.28■□□□□ 0.04
HDAC1-201ENST00000373548 OTORQ9NRC9 128 aa15.28■□□□□ 0.04
HDAC1-201ENST00000373548 COL8A1P27658 744 aa15.28■□□□□ 0.04
HDAC1-201ENST00000373548 KRTAP10-9P60411 292 aa15.28■□□□□ 0.04
HDAC1-201ENST00000373548 C17orf77Q96MU5 243 aa15.27■□□□□ 0.04
HDAC1-201ENST00000373548 TRBV19A0A075B6N1 114 aa15.26■□□□□ 0.03
HDAC1-201ENST00000373548 SCGB2A1O75556 95 aa15.26■□□□□ 0.03
HDAC1-201ENST00000373548 TCRAP04437 139 aa15.26■□□□□ 0.03
HDAC1-201ENST00000373548 GATA3P23771 443 aa15.26■□□□□ 0.03
HDAC1-201ENST00000373548 RPL15P61313 204 aaKnown RBP15.26■□□□□ 0.03
HDAC1-201ENST00000373548 UBE2G1P62253 170 aa15.26■□□□□ 0.03
HDAC1-201ENST00000373548 RPEL1Q2QD12 228 aa15.26■□□□□ 0.03
HDAC1-201ENST00000373548 C19orf54Q5BKX5 351 aa15.26■□□□□ 0.03
HDAC1-201ENST00000373548 IBA57Q5T440 356 aaKnown RBP15.26■□□□□ 0.03
HDAC1-201ENST00000373548 EXOC3-AS1Q8N2X6 119 aa15.26■□□□□ 0.03
HDAC1-201ENST00000373548 OR4F17Q8NGA8 305 aa15.26■□□□□ 0.03
HDAC1-201ENST00000373548 ZNF414Q96IQ9 312 aa15.26■□□□□ 0.03
HDAC1-201ENST00000373548 SGK494Q96LW2 274 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms