RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 HSD52Q0P140 79 aa8.72□□□□□ -1.01
PGK1-201ENST00000373316 C20orf204Q6ZNR8 217 aa8.72□□□□□ -1.01
PGK1-201ENST00000373316 CENPVQ7Z7K6 275 aaPredicted RBP8.72□□□□□ -1.01
PGK1-201ENST00000373316 LEAP2Q969E1 77 aa8.72□□□□□ -1.01
PGK1-201ENST00000373316 TRGV11A0A075B6L2 103 aa8.71□□□□□ -1.01
PGK1-201ENST00000373316 TRBV7-1A0A0A6YYK4 115 aa8.71□□□□□ -1.01
PGK1-201ENST00000373316 SLC17A3O00476 420 aa8.71□□□□□ -1.01
PGK1-201ENST00000373316 IGHV1-8P0DP01 117 aa8.71□□□□□ -1.01
PGK1-201ENST00000373316 CTAG1AP78358 180 aa8.71□□□□□ -1.01
PGK1-201ENST00000373316 IL15RAQ13261 267 aa8.71□□□□□ -1.01
PGK1-201ENST00000373316 POU2AF1Q16633 256 aa8.71□□□□□ -1.01
PGK1-201ENST00000373316 KRTAP27-1Q3LI81 207 aa8.71□□□□□ -1.01
PGK1-201ENST00000373316 COL27A1Q8IZC6 1860 aaPredicted RBP8.71□□□□□ -1.01
PGK1-201ENST00000373316 TLN1Q9Y490 2541 aaKnown RBP8.71□□□□□ -1.01
PGK1-201ENST00000373316 A0A1W2PRD5 423 aa8.71□□□□□ -1.01
PGK1-201ENST00000373316 A0A1W2PRF3 423 aa8.71□□□□□ -1.01
PGK1-201ENST00000373316 A0A1W2PRM7 423 aa8.71□□□□□ -1.01
PGK1-201ENST00000373316 ERVK11-1P61568 191 aa8.71□□□□□ -1.01
PGK1-201ENST00000373316 FAM90A2PQ658T7 463 aa8.71□□□□□ -1.01
PGK1-201ENST00000373316 Q6ZS92 163 aa8.71□□□□□ -1.01
PGK1-201ENST00000373316 IGHV3-21A0A0B4J1V1 117 aa8.71□□□□□ -1.02
PGK1-201ENST00000373316 FOXI3A8MTJ6 420 aaPredicted RBP8.71□□□□□ -1.02
PGK1-201ENST00000373316 H0YJW9 148 aa8.71□□□□□ -1.02
PGK1-201ENST00000373316 GPR183P32249 361 aa8.71□□□□□ -1.02
PGK1-201ENST00000373316 GAFA1Q96PS6 74 aa8.71□□□□□ -1.02
PGK1-201ENST00000373316 F11RQ9Y624 299 aaKnown RBP8.71□□□□□ -1.02
PGK1-201ENST00000373316 C7orf71A4D174 169 aa8.71□□□□□ -1.02
PGK1-201ENST00000373316 C15orf62A8K5M9 175 aa8.71□□□□□ -1.02
PGK1-201ENST00000373316 AMBPP02760 352 aa8.71□□□□□ -1.02
PGK1-201ENST00000373316 C9orf139Q6ZV77 190 aa8.71□□□□□ -1.02
PGK1-201ENST00000373316 CD177Q8N6Q3 437 aa8.71□□□□□ -1.02
PGK1-201ENST00000373316 FAM223BA6NKX1 122 aa8.7□□□□□ -1.02
PGK1-201ENST00000373316 NPFFO15130 113 aa8.7□□□□□ -1.02
PGK1-201ENST00000373316 NDUFB8O95169 186 aa8.7□□□□□ -1.02
PGK1-201ENST00000373316 TPTE2P1Q5T6R2 138 aa8.7□□□□□ -1.02
PGK1-201ENST00000373316 ZNF474Q6S9Z5 364 aaPredicted RBP8.7□□□□□ -1.02
PGK1-201ENST00000373316 FAM223AQ8IWN6 122 aa8.7□□□□□ -1.02
PGK1-201ENST00000373316 LINC00469Q8N7U9 141 aa8.7□□□□□ -1.02
PGK1-201ENST00000373316 ZNF502Q8TBZ5 544 aa8.7□□□□□ -1.02
PGK1-201ENST00000373316 EXPH5Q8NEV8 1989 aa8.7□□□□□ -1.02
PGK1-201ENST00000373316 NIT1Q86X76 327 aa8.7□□□□□ -1.02
PGK1-201ENST00000373316 DPM2O94777 84 aa8.7□□□□□ -1.02
PGK1-201ENST00000373316 RPRMLQ8N4K4 120 aa8.7□□□□□ -1.02
PGK1-201ENST00000373316 KMT2EQ8IZD2 1858 aa8.7□□□□□ -1.02
PGK1-201ENST00000373316 IGHV2-26A0A0B4J1V2 119 aa8.7□□□□□ -1.02
PGK1-201ENST00000373316 ZNF585BQ52M93 769 aa8.7□□□□□ -1.02
PGK1-201ENST00000373316 COQ2Q96H96 371 aa8.7□□□□□ -1.02
PGK1-201ENST00000373316 USMG5Q96IX5 58 aa8.7□□□□□ -1.02
PGK1-201ENST00000373316 TCRAP04437 139 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 IGF2-ASQ6U949 168 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 SCGB3A1Q96QR1 104 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 SPANXA1Q9NS26 97 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 TMEM14CQ9P0S9 112 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 CXCL1P09341 107 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 KIAA1644Q3SXP7 199 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 C11orf52Q96A22 123 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 DCTN5Q9BTE1 182 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 SPANXDQ9BXN6 97 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 TMEM14BQ9NUH8 114 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 RAXQ9Y2V3 346 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 MOB4Q9Y3A3 225 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 LRBAP50851 2863 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 RRN3P1Q2M238 152 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 TMEM75Q8N9X5 138 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 NUDT10Q8NFP7 164 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 NUDT11Q96G61 164 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 NEU1Q99519 415 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 C20orf144Q9BQM9 153 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 YPEL3P61236 119 aaPredicted RBP8.69□□□□□ -1.02
PGK1-201ENST00000373316 TEX36Q5VZQ5 186 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 ARL6IP6Q8N6S5 226 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 ABHD17AQ96GS6 310 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 LINC00477Q96M19 166 aa8.69□□□□□ -1.02
PGK1-201ENST00000373316 ASH1LQ9NR48 2969 aaKnown RBP8.69□□□□□ -1.02
PGK1-201ENST00000373316 A0A1B0GV90 55 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 PSPNO60542 156 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 ZCCHC24Q8N2G6 241 aaKnown RBP8.68□□□□□ -1.02
PGK1-201ENST00000373316 DUX5Q96PT3 197 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 SLX1AQ9BQ83 275 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 DKK1O94907 266 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 ATP5J2P56134 94 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 FAM168AQ92567 244 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 CYYR1Q96J86 154 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 IGHV1-3A0A0C4DH29 117 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 LINC00587B1AMM8 73 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 CEACAM4O75871 244 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 RNASE2P10153 161 aaKnown RBP8.68□□□□□ -1.02
PGK1-201ENST00000373316 ZNF833PQ6ZTB9 187 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 TMEM101Q96IK0 257 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 ROS1P08922 2347 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 POLEQ07864 2286 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 IGLV1-44P01699 117 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 VWC2Q2TAL6 325 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 DTX1Q86Y01 620 aa8.68□□□□□ -1.02
PGK1-201ENST00000373316 GEMIN7Q9H840 131 aaKnown RBP8.68□□□□□ -1.02
PGK1-201ENST00000373316 COL6A6A6NMZ7 2263 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 PGPEP1LA6NFU8 196 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 ADCYAP1P18509 176 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 NTF4P34130 210 aa8.67□□□□□ -1.02
PGK1-201ENST00000373316 EFNA4P52798 201 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms