RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 ZNF491Q8N8L2 437 aa14.06□□□□□ -0.16
CTSA-204ENST00000372484 C21orf62Q9NYP8 219 aa14.06□□□□□ -0.16
CTSA-204ENST00000372484 CELSR2Q9HCU4 2923 aa14.06□□□□□ -0.16
CTSA-204ENST00000372484 IGHV4-30-2A0A087WSY4 118 aa14.05□□□□□ -0.16
CTSA-204ENST00000372484 ISLRO14498 428 aa14.05□□□□□ -0.16
CTSA-204ENST00000372484 OR2J3O76001 311 aa14.05□□□□□ -0.16
CTSA-204ENST00000372484 HIST1H1BP16401 226 aaKnown RBP14.05□□□□□ -0.16
CTSA-204ENST00000372484 YPEL3P61236 119 aaPredicted RBP14.05□□□□□ -0.16
CTSA-204ENST00000372484 ZNF48Q96MX3 618 aaPredicted RBP14.05□□□□□ -0.16
CTSA-204ENST00000372484 TMUB1Q9BVT8 246 aa14.05□□□□□ -0.16
CTSA-204ENST00000372484 OSTCQ9NRP0 149 aa14.05□□□□□ -0.16
CTSA-204ENST00000372484 TMEM14CQ9P0S9 112 aa14.05□□□□□ -0.16
CTSA-204ENST00000372484 CELSR1Q9NYQ6 3014 aa14.05□□□□□ -0.16
CTSA-204ENST00000372484 IFITM10A6NMD0 228 aa14.05□□□□□ -0.16
CTSA-204ENST00000372484 NDUFB8O95169 186 aa14.05□□□□□ -0.16
CTSA-204ENST00000372484 SMIM6P0DI80 62 aa14.05□□□□□ -0.16
CTSA-204ENST00000372484 IBA57Q5T440 356 aaKnown RBP14.05□□□□□ -0.16
CTSA-204ENST00000372484 BAGE2Q86Y30 109 aa14.05□□□□□ -0.16
CTSA-204ENST00000372484 SHANK2-AS3Q9BTD1 123 aa14.05□□□□□ -0.16
CTSA-204ENST00000372484 Q9H3A6 140 aa14.05□□□□□ -0.16
CTSA-204ENST00000372484 PITPNC1Q9UKF7 332 aa14.05□□□□□ -0.16
CTSA-204ENST00000372484 RPH3ALQ9UNE2 315 aa14.05□□□□□ -0.16
CTSA-204ENST00000372484 TRAV9-1A0A075B6T8 112 aa14.04□□□□□ -0.16
CTSA-204ENST00000372484 F8W735 103 aaPredicted RBP14.04□□□□□ -0.16
CTSA-204ENST00000372484 UBE2G1P62253 170 aa14.04□□□□□ -0.16
CTSA-204ENST00000372484 PDZD11Q5EBL8 140 aa14.04□□□□□ -0.16
CTSA-204ENST00000372484 TMEM68Q96MH6 324 aa14.04□□□□□ -0.16
CTSA-204ENST00000372484 TRAPPC1Q9Y5R8 145 aa14.04□□□□□ -0.16
CTSA-204ENST00000372484 TRAV40A0A0B4J280 105 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 IGHV1-69DA0A0B4J2H0 117 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 IGHV1-69P01742 117 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 IGHV3-23P01764 117 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 HIST1H1EP10412 219 aaKnown RBP14.03□□□□□ -0.16
CTSA-204ENST00000372484 RPL15P61313 204 aaKnown RBP14.03□□□□□ -0.16
CTSA-204ENST00000372484 ECSCRQ19T08 205 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 UNQ5815/PRO19632Q6UWF5 114 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 HIST3H2BBQ8N257 126 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 C5orf17Q8NAS9 161 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 ZNF586Q9NXT0 402 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 GAR1Q9NY12 217 aaKnown RBP14.03□□□□□ -0.16
CTSA-204ENST00000372484 FBXL7Q9UJT9 491 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 FAM208BQ5VWN6 2430 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 WI2-2373I1.2A0A1W2PRP0 233 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 H3BRN7 92 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 ATP6V0E1O15342 81 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 TMEM183BQ1AE95 376 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 BRD3OSQ6XYD6 125 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 BPIFA4PQ86YQ2 179 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 ATG101Q9BSB4 218 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 GPR61Q9BZJ8 451 aa14.03□□□□□ -0.16
CTSA-204ENST00000372484 S100A2P29034 98 aa14.02□□□□□ -0.16
CTSA-204ENST00000372484 SERTAD4Q9NUC0 356 aa14.02□□□□□ -0.16
CTSA-204ENST00000372484 LRRK2Q5S007 2527 aa14.02□□□□□ -0.17
CTSA-204ENST00000372484 OR2T8A6NH00 312 aa14.02□□□□□ -0.17
CTSA-204ENST00000372484 PCP4L1A6NKN8 68 aa14.02□□□□□ -0.17
CTSA-204ENST00000372484 FCGR2BP31994 310 aaPredicted RBP14.02□□□□□ -0.17
CTSA-204ENST00000372484 OR8I2Q8N0Y5 310 aa14.02□□□□□ -0.17
CTSA-204ENST00000372484 FAM110DQ8TAY7 271 aaPredicted RBP14.02□□□□□ -0.17
CTSA-204ENST00000372484 NRGNQ92686 78 aa14.02□□□□□ -0.17
CTSA-204ENST00000372484 SGK494Q96LW2 274 aa14.02□□□□□ -0.17
CTSA-204ENST00000372484 XKRY2A2RUG3 117 aa14.01□□□□□ -0.17
CTSA-204ENST00000372484 USF2Q15853 346 aaPredicted RBP14.01□□□□□ -0.17
CTSA-204ENST00000372484 S100A7AQ86SG5 101 aa14.01□□□□□ -0.17
CTSA-204ENST00000372484 ZNF843Q8N446 348 aa14.01□□□□□ -0.17
CTSA-204ENST00000372484 OR4F17Q8NGA8 305 aa14.01□□□□□ -0.17
CTSA-204ENST00000372484 KLF12Q9Y4X4 402 aa14.01□□□□□ -0.17
CTSA-204ENST00000372484 SH2D7A6NKC9 451 aaPredicted RBP14□□□□□ -0.17
CTSA-204ENST00000372484 ZNF705GA8MUZ8 300 aaPredicted RBP14□□□□□ -0.17
CTSA-204ENST00000372484 SCGB2A1O75556 95 aa14□□□□□ -0.17
CTSA-204ENST00000372484 TMEM219Q86XT9 240 aa14□□□□□ -0.17
CTSA-204ENST00000372484 C5orf56Q8N8D9 126 aa14□□□□□ -0.17
CTSA-204ENST00000372484 OTORQ9NRC9 128 aa14□□□□□ -0.17
CTSA-204ENST00000372484 UBR5O95071 2799 aaPredicted RBP14□□□□□ -0.17
CTSA-204ENST00000372484 TCRAP04437 139 aa14□□□□□ -0.17
CTSA-204ENST00000372484 RNF24Q9Y225 148 aa14□□□□□ -0.17
CTSA-204ENST00000372484 EPG5Q9HCE0 2579 aa14□□□□□ -0.17
CTSA-204ENST00000372484 MSMBP08118 114 aa13.99□□□□□ -0.17
CTSA-204ENST00000372484 C15orf32Q32M92 178 aa13.99□□□□□ -0.17
CTSA-204ENST00000372484 PRR27Q6MZM9 219 aa13.99□□□□□ -0.17
CTSA-204ENST00000372484 TMEM183AQ8IXX5 376 aa13.99□□□□□ -0.17
CTSA-204ENST00000372484 BCL6BQ8N143 479 aaPredicted RBP13.99□□□□□ -0.17
CTSA-204ENST00000372484 EXOC3-AS1Q8N2X6 119 aa13.99□□□□□ -0.17
CTSA-204ENST00000372484 CMTM2Q8TAZ6 248 aa13.99□□□□□ -0.17
CTSA-204ENST00000372484 FMC1Q96HJ9 113 aa13.99□□□□□ -0.17
CTSA-204ENST00000372484 TRBV19A0A075B6N1 114 aa13.99□□□□□ -0.17
CTSA-204ENST00000372484 LINC01548A6NM66 108 aa13.99□□□□□ -0.17
CTSA-204ENST00000372484 CTSGP08311 255 aa13.99□□□□□ -0.17
CTSA-204ENST00000372484 IGHV4-38-2P0DP08 117 aa13.99□□□□□ -0.17
CTSA-204ENST00000372484 VN1R17PQ8TDU5 208 aa13.99□□□□□ -0.17
CTSA-204ENST00000372484 GPR82Q96P67 336 aa13.99□□□□□ -0.17
CTSA-204ENST00000372484 TXN2Q99757 166 aa13.99□□□□□ -0.17
CTSA-204ENST00000372484 C7orf69Q9H7B7 122 aa13.99□□□□□ -0.17
CTSA-204ENST00000372484 CENPEQ02224 2701 aa13.98□□□□□ -0.17
CTSA-204ENST00000372484 G3V318 75 aa13.98□□□□□ -0.17
CTSA-204ENST00000372484 IGLC2P0DOY2 106 aa13.98□□□□□ -0.17
CTSA-204ENST00000372484 CBLN1P23435 193 aa13.98□□□□□ -0.17
CTSA-204ENST00000372484 TCL1AP56279 114 aa13.98□□□□□ -0.17
CTSA-204ENST00000372484 FAM231DQ6ZW35 169 aa13.98□□□□□ -0.17
CTSA-204ENST00000372484 MOB4Q9Y3A3 225 aa13.98□□□□□ -0.17
CTSA-204ENST00000372484 COX6B1P14854 86 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms