RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 OR4F4Q96R69 305 aa20.42■□□□□ 0.86
ATPAF1-202ENST00000371937 PAXXQ9BUH6 204 aa20.42■□□□□ 0.86
ATPAF1-202ENST00000371937 SLC25A39Q9BZJ4 359 aaPredicted RBP20.42■□□□□ 0.86
ATPAF1-202ENST00000371937 OR51M1Q9H341 326 aa20.42■□□□□ 0.86
ATPAF1-202ENST00000371937 TMEM250H0YL14 139 aa20.41■□□□□ 0.86
ATPAF1-202ENST00000371937 TGOLN2O43493 480 aa20.41■□□□□ 0.86
ATPAF1-202ENST00000371937 PDE6DO43924 150 aa20.41■□□□□ 0.86
ATPAF1-202ENST00000371937 RAB9AP51151 201 aa20.41■□□□□ 0.86
ATPAF1-202ENST00000371937 UBE2L3P68036 154 aaKnown RBP20.41■□□□□ 0.86
ATPAF1-202ENST00000371937 Q8N2B8 174 aa20.41■□□□□ 0.86
ATPAF1-202ENST00000371937 KLK15Q9H2R5 256 aa20.41■□□□□ 0.86
ATPAF1-202ENST00000371937 PUS1Q9Y606 427 aaKnown RBP eCLIP20.41■□□□□ 0.86
ATPAF1-202ENST00000371937 OR10J4P0C629 311 aa20.4■□□□□ 0.86
ATPAF1-202ENST00000371937 SLC35B1P78383 322 aa20.4■□□□□ 0.86
ATPAF1-202ENST00000371937 GUCA2BQ16661 112 aa20.4■□□□□ 0.86
ATPAF1-202ENST00000371937 GNB4Q9HAV0 340 aa20.4■□□□□ 0.86
ATPAF1-202ENST00000371937 OTOGQ6ZRI0 2925 aa20.39■□□□□ 0.86
ATPAF1-202ENST00000371937 DNAJC9-AS1A6NH13 148 aa20.39■□□□□ 0.86
ATPAF1-202ENST00000371937 FAM74A7A6NL05 159 aa20.39■□□□□ 0.86
ATPAF1-202ENST00000371937 ZNF329Q86UD4 541 aa20.39■□□□□ 0.86
ATPAF1-202ENST00000371937 SMR3AQ99954 134 aa20.39■□□□□ 0.86
ATPAF1-202ENST00000371937 SHANK2-AS3Q9BTD1 123 aa20.39■□□□□ 0.86
ATPAF1-202ENST00000371937 SNAPINO95295 136 aa20.39■□□□□ 0.85
ATPAF1-202ENST00000371937 LY6G6DO95868 133 aa20.39■□□□□ 0.85
ATPAF1-202ENST00000371937 S100A7P31151 101 aa20.39■□□□□ 0.85
ATPAF1-202ENST00000371937 RELQ04864 619 aaPredicted RBP20.39■□□□□ 0.85
ATPAF1-202ENST00000371937 USF2Q15853 346 aaPredicted RBP20.39■□□□□ 0.85
ATPAF1-202ENST00000371937 YTHDF2Q9Y5A9 579 aaKnown RBP20.39■□□□□ 0.85
ATPAF1-202ENST00000371937 PSMB8P28062 276 aa20.38■□□□□ 0.85
ATPAF1-202ENST00000371937 CDC42EP3Q9UKI2 254 aa20.38■□□□□ 0.85
ATPAF1-202ENST00000371937 H3BRN7 92 aa20.37■□□□□ 0.85
ATPAF1-202ENST00000371937 BMPR1BO00238 502 aa20.37■□□□□ 0.85
ATPAF1-202ENST00000371937 PYYP10082 97 aa20.37■□□□□ 0.85
ATPAF1-202ENST00000371937 SRD5A1P18405 259 aa20.37■□□□□ 0.85
ATPAF1-202ENST00000371937 ATP5G3P48201 142 aa20.37■□□□□ 0.85
ATPAF1-202ENST00000371937 RNF24Q9Y225 148 aa20.37■□□□□ 0.85
ATPAF1-202ENST00000371937 A0A1W2PRE2 83 aa20.37■□□□□ 0.85
ATPAF1-202ENST00000371937 F6UZH7 168 aa20.37■□□□□ 0.85
ATPAF1-202ENST00000371937 CLDN34H7C241 214 aa20.37■□□□□ 0.85
ATPAF1-202ENST00000371937 FAM90A2PQ658T7 463 aa20.37■□□□□ 0.85
ATPAF1-202ENST00000371937 TEX38Q6PEX7 206 aa20.37■□□□□ 0.85
ATPAF1-202ENST00000371937 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.36■□□□□ 0.85
ATPAF1-202ENST00000371937 KIAA0141Q14154 515 aaPredicted RBP20.36■□□□□ 0.85
ATPAF1-202ENST00000371937 LEMD1Q68G75 181 aa20.36■□□□□ 0.85
ATPAF1-202ENST00000371937 FXYD5Q96DB9 178 aa20.36■□□□□ 0.85
ATPAF1-202ENST00000371937 TMEM14CQ9P0S9 112 aa20.36■□□□□ 0.85
ATPAF1-202ENST00000371937 RABAC1Q9UI14 185 aa20.36■□□□□ 0.85
ATPAF1-202ENST00000371937 FAM209BQ5JX69 171 aa20.35■□□□□ 0.85
ATPAF1-202ENST00000371937 TOMM20LQ6UXN7 152 aa20.35■□□□□ 0.85
ATPAF1-202ENST00000371937 NKX6-2Q9C056 277 aaPredicted RBP20.35■□□□□ 0.85
ATPAF1-202ENST00000371937 GP9P14770 177 aa20.34■□□□□ 0.85
ATPAF1-202ENST00000371937 FOSL1P15407 271 aa20.34■□□□□ 0.85
ATPAF1-202ENST00000371937 ARL3P36405 182 aa20.34■□□□□ 0.85
ATPAF1-202ENST00000371937 ZNF343Q6P1L6 599 aa20.34■□□□□ 0.85
ATPAF1-202ENST00000371937 NIPSNAP3BQ9BS92 247 aa20.34■□□□□ 0.85
ATPAF1-202ENST00000371937 IGHV3-35A0A0C4DH35 117 aa20.34■□□□□ 0.85
ATPAF1-202ENST00000371937 FAM181BA6NEQ2 426 aa20.34■□□□□ 0.85
ATPAF1-202ENST00000371937 ZNF98A6NK75 572 aa20.34■□□□□ 0.85
ATPAF1-202ENST00000371937 FOXE3Q13461 319 aa20.34■□□□□ 0.85
ATPAF1-202ENST00000371937 BPIFA4PQ86YQ2 179 aa20.34■□□□□ 0.85
ATPAF1-202ENST00000371937 ZNF418Q8TF45 676 aaPredicted RBP20.34■□□□□ 0.85
ATPAF1-202ENST00000371937 PPP5D1E7EU14 171 aa20.33■□□□□ 0.85
ATPAF1-202ENST00000371937 ELANEP08246 267 aa20.33■□□□□ 0.85
ATPAF1-202ENST00000371937 FAM74A3Q4VXF1 159 aa20.33■□□□□ 0.85
ATPAF1-202ENST00000371937 LCNL1Q6ZST4 164 aa20.33■□□□□ 0.85
ATPAF1-202ENST00000371937 OR4X2Q8NGF9 303 aa20.33■□□□□ 0.85
ATPAF1-202ENST00000371937 ZFAND3Q9H8U3 227 aa20.33■□□□□ 0.85
ATPAF1-202ENST00000371937 HIVEP2P31629 2446 aa20.32■□□□□ 0.84
ATPAF1-202ENST00000371937 IGHV3-11P01762 117 aa20.32■□□□□ 0.84
ATPAF1-202ENST00000371937 NBEAP1P0C6P0 100 aa20.32■□□□□ 0.84
ATPAF1-202ENST00000371937 ZNF414Q96IQ9 312 aa20.32■□□□□ 0.84
ATPAF1-202ENST00000371937 ESM1Q9NQ30 184 aa20.32■□□□□ 0.84
ATPAF1-202ENST00000371937 H3BQ15 152 aa20.32■□□□□ 0.84
ATPAF1-202ENST00000371937 CD99P14209 185 aa20.32■□□□□ 0.84
ATPAF1-202ENST00000371937 ATRAIDQ6UW56 229 aa20.32■□□□□ 0.84
ATPAF1-202ENST00000371937 CLRN3Q8NCR9 226 aa20.32■□□□□ 0.84
ATPAF1-202ENST00000371937 ZNF727A8MUV8 499 aa20.31■□□□□ 0.84
ATPAF1-202ENST00000371937 SCO1O75880 301 aa20.31■□□□□ 0.84
ATPAF1-202ENST00000371937 RPL15P61313 204 aaKnown RBP20.31■□□□□ 0.84
ATPAF1-202ENST00000371937 RPUSD4Q96CM3 377 aaKnown RBP20.31■□□□□ 0.84
ATPAF1-202ENST00000371937 SMIM7Q9BQ49 75 aa20.31■□□□□ 0.84
ATPAF1-202ENST00000371937 SERTAD4Q9NUC0 356 aa20.31■□□□□ 0.84
ATPAF1-202ENST00000371937 HIST1H1EP10412 219 aaKnown RBP20.3■□□□□ 0.84
ATPAF1-202ENST00000371937 PARLQ9H300 379 aa20.3■□□□□ 0.84
ATPAF1-202ENST00000371937 C10orf99Q6UWK7 81 aa20.3■□□□□ 0.84
ATPAF1-202ENST00000371937 OR4F17Q8NGA8 305 aa20.3■□□□□ 0.84
ATPAF1-202ENST00000371937 M0R036 132 aa20.29■□□□□ 0.84
ATPAF1-202ENST00000371937 SUMO1P63165 101 aaKnown RBP20.29■□□□□ 0.84
ATPAF1-202ENST00000371937 ZNF674Q2M3X9 581 aa20.29■□□□□ 0.84
ATPAF1-202ENST00000371937 BLNKQ8WV28 456 aa20.29■□□□□ 0.84
ATPAF1-202ENST00000371937 TVP23CQ96ET8 276 aa20.29■□□□□ 0.84
ATPAF1-202ENST00000371937 GGTLC3B5MD39 225 aa20.28■□□□□ 0.84
ATPAF1-202ENST00000371937 NDUFB4O95168 129 aa20.28■□□□□ 0.84
ATPAF1-202ENST00000371937 TRBV12-3P01733 135 aa20.28■□□□□ 0.84
ATPAF1-202ENST00000371937 RNASE1P07998 156 aaKnown RBP20.28■□□□□ 0.84
ATPAF1-202ENST00000371937 NPPCP23582 126 aa20.28■□□□□ 0.84
ATPAF1-202ENST00000371937 RNF152Q8N8N0 203 aa20.28■□□□□ 0.84
ATPAF1-202ENST00000371937 C11orf52Q96A22 123 aa20.28■□□□□ 0.84
ATPAF1-202ENST00000371937 NDUFA4O00483 81 aa20.27■□□□□ 0.84
ATPAF1-202ENST00000371937 CRYBA1P05813 215 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms