RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 C5orf47Q569G3 176 aa12.74□□□□□ -0.37
COL5A1-201ENST00000371817 ZFP36L2P47974 494 aaKnown RBP12.74□□□□□ -0.37
COL5A1-201ENST00000371817 RASL10AQ92737 203 aa12.74□□□□□ -0.37
COL5A1-201ENST00000371817 PLXNA3P51805 1871 aa12.74□□□□□ -0.37
COL5A1-201ENST00000371817 CENPVQ7Z7K6 275 aaPredicted RBP12.74□□□□□ -0.37
COL5A1-201ENST00000371817 C8orf46Q8TAG6 207 aa12.74□□□□□ -0.37
COL5A1-201ENST00000371817 TMEM167AQ8TBQ9 72 aa12.74□□□□□ -0.37
COL5A1-201ENST00000371817 TMEM158Q8WZ71 300 aa12.74□□□□□ -0.37
COL5A1-201ENST00000371817 PRADC1Q9BSG0 188 aa12.74□□□□□ -0.37
COL5A1-201ENST00000371817 ZNF71Q9NQZ8 489 aaPredicted RBP12.74□□□□□ -0.37
COL5A1-201ENST00000371817 LOC101059948A0A1B0GTJ6 334 aa12.73□□□□□ -0.37
COL5A1-201ENST00000371817 IL18BPO95998 194 aa12.73□□□□□ -0.37
COL5A1-201ENST00000371817 CISD3P0C7P0 127 aa12.73□□□□□ -0.37
COL5A1-201ENST00000371817 FAM90A9PA6NNJ1 464 aa12.73□□□□□ -0.37
COL5A1-201ENST00000371817 IGHG4P01861 327 aa12.73□□□□□ -0.37
COL5A1-201ENST00000371817 DTX2Q86UW9 622 aa12.73□□□□□ -0.37
COL5A1-201ENST00000371817 STPG4Q8N801 248 aa12.73□□□□□ -0.37
COL5A1-201ENST00000371817 TMEM52Q8NDY8 209 aa12.73□□□□□ -0.37
COL5A1-201ENST00000371817 GLMPQ8WWB7 406 aa12.73□□□□□ -0.37
COL5A1-201ENST00000371817 SRD5A1P18405 259 aa12.73□□□□□ -0.37
COL5A1-201ENST00000371817 LY96Q9Y6Y9 160 aa12.73□□□□□ -0.37
COL5A1-201ENST00000371817 C12orf77C9JDV5 145 aa12.73□□□□□ -0.37
COL5A1-201ENST00000371817 IFI6P09912 130 aa12.73□□□□□ -0.37
COL5A1-201ENST00000371817 VGLL1Q99990 258 aa12.73□□□□□ -0.37
COL5A1-201ENST00000371817 VCYO14598 125 aa12.72□□□□□ -0.37
COL5A1-201ENST00000371817 DSCR8Q96T75 97 aa12.72□□□□□ -0.37
COL5A1-201ENST00000371817 IGFBP3P17936 291 aaPredicted RBP12.72□□□□□ -0.37
COL5A1-201ENST00000371817 PEBP1P30086 187 aaKnown RBP12.72□□□□□ -0.37
COL5A1-201ENST00000371817 IGHV5-10-1A0A0J9YXX1 117 aa12.72□□□□□ -0.37
COL5A1-201ENST00000371817 WFDC12Q8WWY7 111 aa12.72□□□□□ -0.37
COL5A1-201ENST00000371817 PRR33A8MZF0 331 aa12.72□□□□□ -0.37
COL5A1-201ENST00000371817 Q0VG73 95 aa12.72□□□□□ -0.37
COL5A1-201ENST00000371817 LY6EQ16553 131 aa12.72□□□□□ -0.37
COL5A1-201ENST00000371817 CLEC19AQ6UXS0 136 aa12.72□□□□□ -0.37
COL5A1-201ENST00000371817 SVIPQ8NHG7 77 aa12.72□□□□□ -0.37
COL5A1-201ENST00000371817 PRR7Q8TB68 274 aa12.72□□□□□ -0.37
COL5A1-201ENST00000371817 TRGV11A0A075B6L2 103 aa12.71□□□□□ -0.37
COL5A1-201ENST00000371817 H3BMG7 143 aa12.71□□□□□ -0.37
COL5A1-201ENST00000371817 FXYD7P58549 80 aa12.71□□□□□ -0.37
COL5A1-201ENST00000371817 IGKV1D-33P01593 117 aa12.71□□□□□ -0.37
COL5A1-201ENST00000371817 IGKV1-33P01594 117 aa12.71□□□□□ -0.37
COL5A1-201ENST00000371817 FGF6P10767 208 aa12.71□□□□□ -0.37
COL5A1-201ENST00000371817 DTX1Q86Y01 620 aa12.71□□□□□ -0.37
COL5A1-201ENST00000371817 MYOD1P15172 320 aa12.71□□□□□ -0.38
COL5A1-201ENST00000371817 IGHV1-24A0A0C4DH33 117 aa12.7□□□□□ -0.38
COL5A1-201ENST00000371817 EGR2P11161 476 aaPredicted RBP12.7□□□□□ -0.38
COL5A1-201ENST00000371817 CHCHD5Q9BSY4 110 aa12.7□□□□□ -0.38
COL5A1-201ENST00000371817 J3QW42 95 aa12.7□□□□□ -0.38
COL5A1-201ENST00000371817 DPH3P1Q9H4G8 78 aa12.7□□□□□ -0.38
COL5A1-201ENST00000371817 AHRRA9YTQ3 701 aa12.7□□□□□ -0.38
COL5A1-201ENST00000371817 WNT2P09544 360 aa12.7□□□□□ -0.38
COL5A1-201ENST00000371817 FOXS1O43638 330 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 CEND1Q8N111 149 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 HAMPP81172 84 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 MORN5Q5VZ52 161 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 PLXNB3Q9ULL4 1909 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 COX8AP10176 69 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 Q6ZS52 159 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 PRIMA1Q86XR5 153 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 RNF115Q9Y4L5 304 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 IGLC2P0DOY2 106 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 IGLC3P0DOY3 106 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 ID3Q02535 119 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 IGHV3OR16-8A0A075B7F1 116 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 IGKV1-8A0A0C4DH67 115 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 TRBV6-7A0A0A0MS04 114 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 LYZL1Q6UWQ5 148 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 SRSF8Q9BRL6 282 aaKnown RBP12.69□□□□□ -0.38
COL5A1-201ENST00000371817 PAPPA2Q9BXP8 1791 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 VWA8A3KMH1 1905 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 TRGV4A0A0C4DH28 118 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 HAX1O00165 279 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 VSIRQ9H7M9 311 aa12.69□□□□□ -0.38
COL5A1-201ENST00000371817 C2CD4DB7Z1M9 353 aa12.68□□□□□ -0.38
COL5A1-201ENST00000371817 ERCC8Q13216 396 aa12.68□□□□□ -0.38
COL5A1-201ENST00000371817 MARF1Q9Y4F3 1742 aaKnown RBP12.68□□□□□ -0.38
COL5A1-201ENST00000371817 TRAV40A0A0B4J280 105 aa12.68□□□□□ -0.38
COL5A1-201ENST00000371817 C6orf226Q5I0X4 101 aa12.68□□□□□ -0.38
COL5A1-201ENST00000371817 STHQ8IWL8 128 aa12.68□□□□□ -0.38
COL5A1-201ENST00000371817 AMN1Q8IY45 258 aa12.68□□□□□ -0.38
COL5A1-201ENST00000371817 SPXQ9BT56 116 aa12.68□□□□□ -0.38
COL5A1-201ENST00000371817 SBF1O95248 1867 aa12.68□□□□□ -0.38
COL5A1-201ENST00000371817 IMMP1LQ96LU5 166 aa12.67□□□□□ -0.38
COL5A1-201ENST00000371817 ZNF138P52744 262 aa12.67□□□□□ -0.38
COL5A1-201ENST00000371817 CRYBA4P53673 196 aa12.67□□□□□ -0.38
COL5A1-201ENST00000371817 MCRIP2Q9BUT9 160 aaKnown RBP12.67□□□□□ -0.38
COL5A1-201ENST00000371817 DPM3Q9P2X0 92 aa12.67□□□□□ -0.38
COL5A1-201ENST00000371817 RPUSD1Q9UJJ7 312 aaKnown RBP12.67□□□□□ -0.38
COL5A1-201ENST00000371817 IGHV1OR15-9A0A0B4J2B8 117 aa12.67□□□□□ -0.38
COL5A1-201ENST00000371817 SYNJ2BPP57105 145 aa12.67□□□□□ -0.38
COL5A1-201ENST00000371817 PRO1854Q9UHT4 67 aa12.67□□□□□ -0.38
COL5A1-201ENST00000371817 PF4P02776 101 aa12.67□□□□□ -0.38
COL5A1-201ENST00000371817 TCRAP04437 139 aa12.67□□□□□ -0.38
COL5A1-201ENST00000371817 C15orf53Q8NAA6 179 aa12.67□□□□□ -0.38
COL5A1-201ENST00000371817 IGHG3P01860 377 aa12.67□□□□□ -0.38
COL5A1-201ENST00000371817 HLA-DMBP28068 263 aa12.67□□□□□ -0.38
COL5A1-201ENST00000371817 UPK2O00526 184 aa12.67□□□□□ -0.38
COL5A1-201ENST00000371817 YPEL1O60688 119 aa12.67□□□□□ -0.38
COL5A1-201ENST00000371817 YPEL2Q96QA6 119 aa12.67□□□□□ -0.38
COL5A1-201ENST00000371817 CYTL1Q9NRR1 136 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms