RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 HIST1H1BP16401 226 aaKnown RBP10.94□□□□□ -0.66
HMGCS2-201ENST00000369406 VN1R17PQ8TDU5 208 aa10.94□□□□□ -0.66
HMGCS2-201ENST00000369406 TMEM68Q96MH6 324 aa10.94□□□□□ -0.66
HMGCS2-201ENST00000369406 MRPL32Q9BYC8 188 aaKnown RBP10.94□□□□□ -0.66
HMGCS2-201ENST00000369406 ZNF702PQ9H963 129 aa10.94□□□□□ -0.66
HMGCS2-201ENST00000369406 THYN1Q9P016 225 aa10.94□□□□□ -0.66
HMGCS2-201ENST00000369406 MRPL27Q9P0M9 148 aaKnown RBP10.94□□□□□ -0.66
HMGCS2-201ENST00000369406 WI2-2373I1.2A0A1W2PRP0 233 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 C11orf94C9JXX5 98 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 IL4P05112 153 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 CLEC3BP05452 202 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 AKR1C3P42330 323 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 SOHLH1Q5JUK2 328 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 CLEC19AQ6UXS0 136 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 RBMS3Q6XE24 437 aaKnown RBP10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 OR1L4Q8NGR5 311 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 C2CD4CQ8TF44 421 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 FXYD5Q96DB9 178 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 PFDN5Q99471 154 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 C19orf24Q9BVV8 132 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 SMDT1Q9H4I9 107 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 GSN-AS1Q9NRJ2 163 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 PPP5D1E7EU14 171 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 H3BTX0 84 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 IFNA1P01562 189 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 TRGV3P03979 118 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 FCGR2BP31994 310 aaPredicted RBP10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 CST9LP1Q5W188 147 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 RNF125Q96EQ8 232 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 DERL1Q9BUN8 251 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 ESM1Q9NQ30 184 aa10.93□□□□□ -0.66
HMGCS2-201ENST00000369406 BAHCC1Q9P281 2608 aa10.92□□□□□ -0.66
HMGCS2-201ENST00000369406 AP4M1O00189 453 aa10.92□□□□□ -0.66
HMGCS2-201ENST00000369406 SNAPINO95295 136 aa10.92□□□□□ -0.66
HMGCS2-201ENST00000369406 IGLV1-40P01703 118 aa10.92□□□□□ -0.66
HMGCS2-201ENST00000369406 S100A6P06703 90 aa10.92□□□□□ -0.66
HMGCS2-201ENST00000369406 YPEL3P61236 119 aaPredicted RBP10.92□□□□□ -0.66
HMGCS2-201ENST00000369406 SLC25A39Q9BZJ4 359 aaPredicted RBP10.92□□□□□ -0.66
HMGCS2-201ENST00000369406 HIVEP2P31629 2446 aa10.92□□□□□ -0.66
HMGCS2-201ENST00000369406 GGTLC3B5MD39 225 aa10.92□□□□□ -0.66
HMGCS2-201ENST00000369406 GP9P14770 177 aa10.92□□□□□ -0.66
HMGCS2-201ENST00000369406 TPPP2P59282 170 aa10.92□□□□□ -0.66
HMGCS2-201ENST00000369406 SVBPQ8N300 66 aa10.92□□□□□ -0.66
HMGCS2-201ENST00000369406 HIGD1AQ9Y241 93 aa10.92□□□□□ -0.66
HMGCS2-201ENST00000369406 PUS1Q9Y606 427 aaKnown RBP eCLIP10.92□□□□□ -0.66
HMGCS2-201ENST00000369406 ELOA3CA0A087WX78 387 aaPredicted RBP10.91□□□□□ -0.66
HMGCS2-201ENST00000369406 IGHV3-11P01762 117 aa10.91□□□□□ -0.66
HMGCS2-201ENST00000369406 UBE2L3P68036 154 aaKnown RBP10.91□□□□□ -0.66
HMGCS2-201ENST00000369406 CBLN2Q8IUK8 224 aa10.91□□□□□ -0.66
HMGCS2-201ENST00000369406 RPUSD4Q96CM3 377 aaKnown RBP10.91□□□□□ -0.66
HMGCS2-201ENST00000369406 SCO2A0A1W2PP80 73 aa10.9□□□□□ -0.66
HMGCS2-201ENST00000369406 H3BQ15 152 aa10.9□□□□□ -0.66
HMGCS2-201ENST00000369406 OR2C1O95371 312 aa10.9□□□□□ -0.66
HMGCS2-201ENST00000369406 AWAT1Q58HT5 328 aa10.9□□□□□ -0.66
HMGCS2-201ENST00000369406 PQLC2Q6ZP29 291 aa10.9□□□□□ -0.66
HMGCS2-201ENST00000369406 ZFP82Q8N141 532 aa10.9□□□□□ -0.66
HMGCS2-201ENST00000369406 PAXXQ9BUH6 204 aa10.9□□□□□ -0.66
HMGCS2-201ENST00000369406 PF4V1P10720 104 aa10.9□□□□□ -0.66
HMGCS2-201ENST00000369406 SRP14P37108 136 aaKnown RBP10.9□□□□□ -0.66
HMGCS2-201ENST00000369406 ATP5G2Q06055 141 aa10.9□□□□□ -0.66
HMGCS2-201ENST00000369406 RNF2Q99496 336 aa10.9□□□□□ -0.66
HMGCS2-201ENST00000369406 OR51M1Q9H341 326 aa10.9□□□□□ -0.66
HMGCS2-201ENST00000369406 ZFAND3Q9H8U3 227 aa10.9□□□□□ -0.66
HMGCS2-201ENST00000369406 TRAV30A0A087WSZ9 112 aa10.89□□□□□ -0.67
HMGCS2-201ENST00000369406 H3BRN7 92 aa10.89□□□□□ -0.67
HMGCS2-201ENST00000369406 TAS2R45P59539 299 aa10.89□□□□□ -0.67
HMGCS2-201ENST00000369406 ZNF674Q2M3X9 581 aa10.89□□□□□ -0.67
HMGCS2-201ENST00000369406 ZNF343Q6P1L6 599 aa10.89□□□□□ -0.67
HMGCS2-201ENST00000369406 EEF1AKMT3Q96AZ1 226 aa10.89□□□□□ -0.67
HMGCS2-201ENST00000369406 TXN2Q99757 166 aa10.89□□□□□ -0.67
HMGCS2-201ENST00000369406 DNAJC9-AS1A6NH13 148 aa10.89□□□□□ -0.67
HMGCS2-201ENST00000369406 PRB4P10163 310 aaPredicted RBP10.89□□□□□ -0.67
HMGCS2-201ENST00000369406 HIST2H2BDQ6DRA6 164 aa10.89□□□□□ -0.67
HMGCS2-201ENST00000369406 TOMM20LQ6UXN7 152 aa10.89□□□□□ -0.67
HMGCS2-201ENST00000369406 SHANK2-AS3Q9BTD1 123 aa10.89□□□□□ -0.67
HMGCS2-201ENST00000369406 PARLQ9H300 379 aa10.89□□□□□ -0.67
HMGCS2-201ENST00000369406 CLPSL1A2RUU4 121 aa10.88□□□□□ -0.67
HMGCS2-201ENST00000369406 FAM223BA6NKX1 122 aa10.88□□□□□ -0.67
HMGCS2-201ENST00000369406 TGOLN2O43493 480 aa10.88□□□□□ -0.67
HMGCS2-201ENST00000369406 FAM223AQ8IWN6 122 aa10.88□□□□□ -0.67
HMGCS2-201ENST00000369406 GNB4Q9HAV0 340 aa10.88□□□□□ -0.67
HMGCS2-201ENST00000369406 FN1P02751 2386 aaKnown RBP10.88□□□□□ -0.67
HMGCS2-201ENST00000369406 TRBV20OR9-2A0A075B6H5 130 aa10.88□□□□□ -0.67
HMGCS2-201ENST00000369406 MRPS12O15235 138 aaKnown RBP10.88□□□□□ -0.67
HMGCS2-201ENST00000369406 NDUFB4O95168 129 aa10.88□□□□□ -0.67
HMGCS2-201ENST00000369406 LY6G6DO95868 133 aa10.88□□□□□ -0.67
HMGCS2-201ENST00000369406 Q71RC1 249 aaPredicted RBP10.88□□□□□ -0.67
HMGCS2-201ENST00000369406 BLNKQ8WV28 456 aa10.88□□□□□ -0.67
HMGCS2-201ENST00000369406 C17orf77Q96MU5 243 aa10.88□□□□□ -0.67
HMGCS2-201ENST00000369406 NIT2Q9NQR4 276 aa10.88□□□□□ -0.67
HMGCS2-201ENST00000369406 TMEM167BQ9NRX6 74 aa10.88□□□□□ -0.67
HMGCS2-201ENST00000369406 PGPEP1LA6NFU8 196 aa10.87□□□□□ -0.67
HMGCS2-201ENST00000369406 TMEM250H0YL14 139 aa10.87□□□□□ -0.67
HMGCS2-201ENST00000369406 BRI3O95415 125 aa10.87□□□□□ -0.67
HMGCS2-201ENST00000369406 SMIM6P0DI80 62 aa10.87□□□□□ -0.67
HMGCS2-201ENST00000369406 PSMB8P28062 276 aa10.87□□□□□ -0.67
HMGCS2-201ENST00000369406 RAB9AP51151 201 aa10.87□□□□□ -0.67
HMGCS2-201ENST00000369406 Q8WTZ3 238 aa10.87□□□□□ -0.67
HMGCS2-201ENST00000369406 ELOVL1Q9BW60 279 aa10.87□□□□□ -0.67
HMGCS2-201ENST00000369406 ZNF586Q9NXT0 402 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms