RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 LYPD6BQ8NI32 183 aa9.47□□□□□ -0.89
TUBE1-202ENST00000368662 ZFAND3Q9H8U3 227 aa9.47□□□□□ -0.89
TUBE1-202ENST00000368662 RABAC1Q9UI14 185 aa9.47□□□□□ -0.89
TUBE1-202ENST00000368662 MAP1LC3B2A6NCE7 125 aa9.47□□□□□ -0.89
TUBE1-202ENST00000368662 NUDT19A8MXV4 375 aa9.47□□□□□ -0.89
TUBE1-202ENST00000368662 ZP3P21754 424 aa9.47□□□□□ -0.89
TUBE1-202ENST00000368662 USF2Q15853 346 aaPredicted RBP9.47□□□□□ -0.89
TUBE1-202ENST00000368662 PCNPQ8WW12 178 aaKnown RBP9.47□□□□□ -0.89
TUBE1-202ENST00000368662 MAP1LC3BQ9GZQ8 125 aa9.47□□□□□ -0.89
TUBE1-202ENST00000368662 TECRQ9NZ01 308 aaKnown RBP9.47□□□□□ -0.89
TUBE1-202ENST00000368662 STAG3L2P0CL84 134 aa9.46□□□□□ -0.89
TUBE1-202ENST00000368662 STAG3L3P0CL85 134 aa9.46□□□□□ -0.89
TUBE1-202ENST00000368662 C8orf88P0DMB2 117 aa9.46□□□□□ -0.89
TUBE1-202ENST00000368662 KHDC3LQ587J8 217 aa9.46□□□□□ -0.89
TUBE1-202ENST00000368662 LCN15Q6UWW0 184 aa9.46□□□□□ -0.89
TUBE1-202ENST00000368662 STXBP6Q8NFX7 210 aa9.46□□□□□ -0.89
TUBE1-202ENST00000368662 UHRF2Q96PU4 802 aa9.46□□□□□ -0.89
TUBE1-202ENST00000368662 METTL26Q96S19 204 aa9.46□□□□□ -0.89
TUBE1-202ENST00000368662 CITED2Q99967 270 aaPredicted RBP9.46□□□□□ -0.89
TUBE1-202ENST00000368662 SLC25A39Q9BZJ4 359 aaPredicted RBP9.46□□□□□ -0.89
TUBE1-202ENST00000368662 HRH4Q9H3N8 390 aa9.46□□□□□ -0.89
TUBE1-202ENST00000368662 IGHV4OR15-8A0A075B7B6 117 aa9.46□□□□□ -0.9
TUBE1-202ENST00000368662 A0A087WW49 117 aa9.46□□□□□ -0.9
TUBE1-202ENST00000368662 LINC01619G3V211 115 aa9.46□□□□□ -0.9
TUBE1-202ENST00000368662 CXorf1O96002 111 aa9.46□□□□□ -0.9
TUBE1-202ENST00000368662 PQLC2Q6ZP29 291 aa9.46□□□□□ -0.9
TUBE1-202ENST00000368662 MIR17HGQ75NE6 70 aa9.46□□□□□ -0.9
TUBE1-202ENST00000368662 SSX7Q7RTT5 188 aa9.46□□□□□ -0.9
TUBE1-202ENST00000368662 C11orf44Q8N8P7 122 aa9.46□□□□□ -0.9
TUBE1-202ENST00000368662 TMEM190Q8WZ59 177 aa9.46□□□□□ -0.9
TUBE1-202ENST00000368662 DPF1Q92782 380 aa9.46□□□□□ -0.9
TUBE1-202ENST00000368662 ZNF414Q96IQ9 312 aa9.46□□□□□ -0.9
TUBE1-202ENST00000368662 H3BRN7 92 aa9.45□□□□□ -0.9
TUBE1-202ENST00000368662 NDUFA5Q16718 116 aa9.45□□□□□ -0.9
TUBE1-202ENST00000368662 OR11H1Q8NG94 326 aa9.45□□□□□ -0.9
TUBE1-202ENST00000368662 NARS2Q96I59 477 aaKnown RBP9.45□□□□□ -0.9
TUBE1-202ENST00000368662 SHANK2-AS3Q9BTD1 123 aa9.45□□□□□ -0.9
TUBE1-202ENST00000368662 C20orf24Q9BUV8 137 aa9.45□□□□□ -0.9
TUBE1-202ENST00000368662 UFC1Q9Y3C8 167 aa9.45□□□□□ -0.9
TUBE1-202ENST00000368662 NPPCP23582 126 aa9.44□□□□□ -0.9
TUBE1-202ENST00000368662 HOXD3P31249 432 aaPredicted RBP9.44□□□□□ -0.9
TUBE1-202ENST00000368662 SPATA31B1PQ5VZV4 182 aa9.44□□□□□ -0.9
TUBE1-202ENST00000368662 OR1N2Q8NGR9 330 aa9.44□□□□□ -0.9
TUBE1-202ENST00000368662 DAZ1Q9NQZ3 744 aaKnown RBP9.44□□□□□ -0.9
TUBE1-202ENST00000368662 MED9Q9NWA0 146 aa9.44□□□□□ -0.9
TUBE1-202ENST00000368662 ZNF320A2RRD8 509 aa9.44□□□□□ -0.9
TUBE1-202ENST00000368662 K7EMT4 169 aa9.44□□□□□ -0.9
TUBE1-202ENST00000368662 LGALS9O00182 355 aa9.44□□□□□ -0.9
TUBE1-202ENST00000368662 HMGB3O15347 200 aaKnown RBP9.44□□□□□ -0.9
TUBE1-202ENST00000368662 CRYBB3P26998 211 aa9.44□□□□□ -0.9
TUBE1-202ENST00000368662 PSMB3P49720 205 aa9.44□□□□□ -0.9
TUBE1-202ENST00000368662 PPT1P50897 306 aa9.44□□□□□ -0.9
TUBE1-202ENST00000368662 IL34Q6ZMJ4 242 aa9.44□□□□□ -0.9
TUBE1-202ENST00000368662 C18orf65Q6ZTR6 163 aa9.44□□□□□ -0.9
TUBE1-202ENST00000368662 REC114Q7Z4M0 266 aa9.44□□□□□ -0.9
TUBE1-202ENST00000368662 NDUFA11Q86Y39 141 aa9.44□□□□□ -0.9
TUBE1-202ENST00000368662 C1QL4Q86Z23 238 aa9.44□□□□□ -0.9
TUBE1-202ENST00000368662 LINC00862A6NCI5 91 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 ZNF98A6NK75 572 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 OR7C2O60412 319 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 ARL14EPLP0DKL9 152 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 FGF8P55075 233 aaPredicted RBP9.43□□□□□ -0.9
TUBE1-202ENST00000368662 PMS2P11Q13670 270 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 AWAT1Q58HT5 328 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 UNQ9165/PRO28630Q6UXU0 137 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 C8orf86Q6ZUL3 223 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 SLC25A2Q9BXI2 301 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 A0A1B0GV50 99 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 A0A1W2PS18 150 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 A8MWP6 167 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 DEFB136Q30KP8 78 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 C1orf194Q5T5A4 169 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 BPIFA4PQ86YQ2 179 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 FAM167A-AS1Q96KT0 104 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 GPR82Q96P67 336 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 TMEM167BQ9NRX6 74 aa9.43□□□□□ -0.9
TUBE1-202ENST00000368662 IGHV3OR16-8A0A075B7F1 116 aa9.42□□□□□ -0.9
TUBE1-202ENST00000368662 A0A1W2PRX2 142 aa9.42□□□□□ -0.9
TUBE1-202ENST00000368662 BUB3O43684 328 aa9.42□□□□□ -0.9
TUBE1-202ENST00000368662 IFNA1P01562 189 aa9.42□□□□□ -0.9
TUBE1-202ENST00000368662 BMI1P35226 326 aa9.42□□□□□ -0.9
TUBE1-202ENST00000368662 FHL3Q13643 280 aa9.42□□□□□ -0.9
TUBE1-202ENST00000368662 KLF5Q13887 457 aaPredicted RBP9.42□□□□□ -0.9
TUBE1-202ENST00000368662 KRTAP24-1Q3LI83 254 aa9.42□□□□□ -0.9
TUBE1-202ENST00000368662 MORN5Q5VZ52 161 aa9.42□□□□□ -0.9
TUBE1-202ENST00000368662 PRIMA1Q86XR5 153 aa9.42□□□□□ -0.9
TUBE1-202ENST00000368662 IQCF2Q8IXL9 164 aa9.42□□□□□ -0.9
TUBE1-202ENST00000368662 PAXXQ9BUH6 204 aa9.42□□□□□ -0.9
TUBE1-202ENST00000368662 SCRT1Q9BWW7 348 aa9.42□□□□□ -0.9
TUBE1-202ENST00000368662 OR51M1Q9H341 326 aa9.42□□□□□ -0.9
TUBE1-202ENST00000368662 TMEM14CQ9P0S9 112 aa9.42□□□□□ -0.9
TUBE1-202ENST00000368662 TRAV5A0A0B4J249 113 aa9.41□□□□□ -0.9
TUBE1-202ENST00000368662 CCL24O00175 119 aa9.41□□□□□ -0.9
TUBE1-202ENST00000368662 EIF3GO75821 320 aaKnown RBP eCLIP9.41□□□□□ -0.9
TUBE1-202ENST00000368662 RPL7P18124 248 aaKnown RBP9.41□□□□□ -0.9
TUBE1-202ENST00000368662 GCHFRP30047 84 aa9.41□□□□□ -0.9
TUBE1-202ENST00000368662 TAGLN2P37802 199 aaKnown RBP9.41□□□□□ -0.9
TUBE1-202ENST00000368662 SYNJ2BPP57105 145 aa9.41□□□□□ -0.9
TUBE1-202ENST00000368662 MARC2Q969Z3 335 aa9.41□□□□□ -0.9
TUBE1-202ENST00000368662 GRAMD2BQ96HH9 432 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms