RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 FUT9Q9Y231 359 aa7.33□□□□□ -1.24
VTA1-201ENST00000367621 CUBNO60494 3623 aa7.33□□□□□ -1.24
VTA1-201ENST00000367621 FN1P02751 2386 aaKnown RBP7.32□□□□□ -1.24
VTA1-201ENST00000367621 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.32□□□□□ -1.24
VTA1-201ENST00000367621 GNG7O60262 68 aa7.32□□□□□ -1.24
VTA1-201ENST00000367621 TRBV12-3P01733 135 aa7.32□□□□□ -1.24
VTA1-201ENST00000367621 HBE1P02100 147 aa7.32□□□□□ -1.24
VTA1-201ENST00000367621 PF4V1P10720 104 aa7.32□□□□□ -1.24
VTA1-201ENST00000367621 ORM2P19652 201 aa7.32□□□□□ -1.24
VTA1-201ENST00000367621 GPR183P32249 361 aa7.32□□□□□ -1.24
VTA1-201ENST00000367621 TPPP2P59282 170 aa7.32□□□□□ -1.24
VTA1-201ENST00000367621 RHOBP62745 196 aa7.32□□□□□ -1.24
VTA1-201ENST00000367621 SCGB2A2Q13296 93 aa7.32□□□□□ -1.24
VTA1-201ENST00000367621 FOXE3Q13461 319 aa7.32□□□□□ -1.24
VTA1-201ENST00000367621 FAM78BQ5VT40 261 aa7.32□□□□□ -1.24
VTA1-201ENST00000367621 ZNF343Q6P1L6 599 aa7.32□□□□□ -1.24
VTA1-201ENST00000367621 CLEC19AQ6UXS0 136 aa7.32□□□□□ -1.24
VTA1-201ENST00000367621 RARRES2Q99969 163 aa7.32□□□□□ -1.24
VTA1-201ENST00000367621 SLC25A2Q9BXI2 301 aa7.32□□□□□ -1.24
VTA1-201ENST00000367621 NSD1Q96L73 2696 aaPredicted RBP7.32□□□□□ -1.24
VTA1-201ENST00000367621 A0A1W2PPV4 95 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 CLPSL1A2RUU4 121 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 PPP5D1E7EU14 171 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 TGOLN2O43493 480 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 COX7A2P2O60397 106 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 HYPMO75409 117 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 CRLF1O75462 422 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 ELANEP08246 267 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 ARL14EPLP0DKL9 152 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 C8orf88P0DMB2 117 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 ICAM4Q14773 271 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 USF2Q15853 346 aaPredicted RBP7.31□□□□□ -1.24
VTA1-201ENST00000367621 GUK1Q16774 197 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 TCTEX1D4Q5JR98 221 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 TOR2AQ5JU69 321 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 ZNF506Q5JVG8 444 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 C10orf113Q5VZT2 155 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 UQCC3Q6UW78 93 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 TOMM20LQ6UXN7 152 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 OR51G1Q8NGK1 321 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 OR1L4Q8NGR5 311 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 OR1B1Q8NGR6 318 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 SUN5Q8TC36 379 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 ZNF418Q8TF45 676 aaPredicted RBP7.31□□□□□ -1.24
VTA1-201ENST00000367621 UHRF2Q96PU4 802 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 RNF2Q99496 336 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 MRPL32Q9BYC8 188 aaKnown RBP7.31□□□□□ -1.24
VTA1-201ENST00000367621 C16orf95Q9H693 158 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 TMEM231Q9H6L2 316 aa7.31□□□□□ -1.24
VTA1-201ENST00000367621 LOC102723971A0A1B0GUV8 181 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 RBFOX3A6NFN3 312 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 BMPR1BO00238 502 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 IGHV3-11P01762 117 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 IL4P05112 153 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 FABP1P07148 127 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 GCHFRP30047 84 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 RPL15P61313 204 aaKnown RBP7.3□□□□□ -1.24
VTA1-201ENST00000367621 LYZP61626 148 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 TEX38Q6PEX7 206 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 ZNF600Q6ZNG1 722 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 LINC00305Q7Z4B0 112 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 OR4X2Q8NGF9 303 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 Q8WTZ3 238 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 RNF125Q96EQ8 232 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 PFDN5Q99471 154 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 SHANK2-AS3Q9BTD1 123 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 GNB4Q9HAV0 340 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 TECRQ9NZ01 308 aaKnown RBP7.3□□□□□ -1.24
VTA1-201ENST00000367621 HIGD1AQ9Y241 93 aa7.3□□□□□ -1.24
VTA1-201ENST00000367621 PUS1Q9Y606 427 aaKnown RBP eCLIP7.3□□□□□ -1.24
VTA1-201ENST00000367621 IGHV3-35A0A0C4DH35 117 aa7.29□□□□□ -1.24
VTA1-201ENST00000367621 A0A0G2JLM5 398 aa7.29□□□□□ -1.24
VTA1-201ENST00000367621 TMEM218A2RU14 115 aa7.29□□□□□ -1.24
VTA1-201ENST00000367621 H3BRN7 92 aa7.29□□□□□ -1.24
VTA1-201ENST00000367621 MRPS12O15235 138 aaKnown RBP7.29□□□□□ -1.24
VTA1-201ENST00000367621 NUPL2O15504 423 aaKnown RBP7.29□□□□□ -1.24
VTA1-201ENST00000367621 NDUFA7O95182 113 aa7.29□□□□□ -1.24
VTA1-201ENST00000367621 CXorf1O96002 111 aa7.29□□□□□ -1.24
VTA1-201ENST00000367621 BCL2P10415 239 aa7.29□□□□□ -1.24
VTA1-201ENST00000367621 HAGHQ16775 308 aa7.29□□□□□ -1.24
VTA1-201ENST00000367621 LEMD1Q68G75 181 aa7.29□□□□□ -1.24
VTA1-201ENST00000367621 LINC01006Q8NI28 216 aa7.29□□□□□ -1.24
VTA1-201ENST00000367621 LINC00052Q96N35 136 aa7.29□□□□□ -1.24
VTA1-201ENST00000367621 PBDC1Q9BVG4 233 aa7.29□□□□□ -1.24
VTA1-201ENST00000367621 SLC25A39Q9BZJ4 359 aaPredicted RBP7.29□□□□□ -1.24
VTA1-201ENST00000367621 GAR1Q9NY12 217 aaKnown RBP7.29□□□□□ -1.24
VTA1-201ENST00000367621 GNG13Q9P2W3 67 aa7.29□□□□□ -1.24
VTA1-201ENST00000367621 NF1P21359 2839 aa7.28□□□□□ -1.24
VTA1-201ENST00000367621 SRP19P09132 144 aaKnown RBP7.28□□□□□ -1.24
VTA1-201ENST00000367621 PYYP10082 97 aa7.28□□□□□ -1.24
VTA1-201ENST00000367621 GP9P14770 177 aa7.28□□□□□ -1.24
VTA1-201ENST00000367621 ADCYAP1P18509 176 aa7.28□□□□□ -1.24
VTA1-201ENST00000367621 ARL3P36405 182 aa7.28□□□□□ -1.24
VTA1-201ENST00000367621 PSMB3P49720 205 aa7.28□□□□□ -1.24
VTA1-201ENST00000367621 CD81P60033 236 aa7.28□□□□□ -1.24
VTA1-201ENST00000367621 SLC35B1P78383 322 aa7.28□□□□□ -1.24
VTA1-201ENST00000367621 SRSF2Q01130 221 aaKnown RBP7.28□□□□□ -1.24
VTA1-201ENST00000367621 C10orf91Q5T1B1 145 aa7.28□□□□□ -1.24
VTA1-201ENST00000367621 C18orf65Q6ZTR6 163 aa7.28□□□□□ -1.24
VTA1-201ENST00000367621 KLHDC1Q8N7A1 406 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms