RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 KIAA1109Q2LD37 5005 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 IGHV4-4A0A075B6R2 117 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 C11orf94C9JXX5 98 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 GIG44P09565 113 aaPredicted RBP3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 ZNF688P0C7X2 276 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 C4BPBP20851 252 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 NPPCP23582 126 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 S100GP29377 79 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 PRSS3P35030 304 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 SNCAP37840 140 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 NPBWR1P48145 328 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 PPP5CP53041 499 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 TCTAP57738 103 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 HSPE1P61604 102 aaKnown RBP3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 TSPAN5P62079 268 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 LSM3P62310 102 aaKnown RBP3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 ERHP84090 104 aaKnown RBP3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 PRCDQ00LT1 54 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 UBE2NLQ5JXB2 153 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 ADAMTSL4-AS1Q5T5F5 129 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 ZNF600Q6ZNG1 722 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 SAMD12Q8N8I0 201 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 DUSP18Q8NEJ0 188 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 MRPL36Q9P0J6 103 aaKnown RBP3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 DNAH6Q9C0G6 4158 aa3.71□□□□□ -1.82
RNU4-4P-201ENST00000364588 HECTD4Q9Y4D8 3996 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 A0A087X002 238 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 TRAV2A0A0B4J234 112 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 TRAV10A0A0B4J240 114 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 K7EQG2 157 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 M0R2N4 97 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 TMEM50AO95807 157 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 IFNA17P01571 189 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 CD5P06127 495 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 MIFP14174 115 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 PGAM2P15259 253 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 ETV6P41212 452 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 P2RY1P47900 373 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 AKR1C2P52895 323 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 ACTL10Q5JWF8 245 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 LPCAT3Q6P1A2 487 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 SNX29P2Q8IUI4 249 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 CENPSQ8N2Z9 138 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 SLC35G3Q8N808 338 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 TMEM230Q96A57 120 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 SAT2Q96F10 170 aaPredicted RBP3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 METTL26Q96S19 204 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 SCRT1Q9BWW7 348 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 YTHDF1Q9BYJ9 559 aaKnown RBP3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 Q9H521 79 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 FNDC4Q9H6D8 234 aaPredicted RBP3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 TMEM231Q9H6L2 316 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 FAM212BQ9NTI7 297 aaPredicted RBP3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 TBC1D24Q9ULP9 559 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 CELA1Q9UNI1 258 aa3.7□□□□□ -1.82
RNU4-4P-201ENST00000364588 DEFB131BA0A096LNP1 70 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 IGLV9-49A0A0B4J1Y8 123 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 A0A1B0GVY2 172 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 ZNF705EA8MWA4 302 aaPredicted RBP3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 CLN5O75503 358 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 ATP6V1G2O95670 118 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 IGKV1-5P01602 117 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 RNASE2P10153 161 aaKnown RBP3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 SPP1P10451 314 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 CRYBB3P26998 211 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 OPRK1P41145 380 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 PNRC1Q12796 327 aaPredicted RBP3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 DHRS2Q13268 280 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 C12orf74Q32Q52 190 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 SP6Q3SY56 376 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 TIGITQ495A1 244 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 TMEM41BQ5BJD5 291 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 PSMG4Q5JS54 123 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 PVRIGQ6DKI7 326 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 MORN3Q6PF18 240 aaPredicted RBP3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 LINC00336Q6ZUF6 198 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 CROCCP3Q8IVE0 287 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 GPX8Q8TED1 209 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 DCANP1Q8TF63 244 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 TP53RKQ96S44 253 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 PDCD10Q9BUL8 212 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 RNF126Q9BV68 326 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 COMMD3Q9UBI1 195 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 PYGO1Q9Y3Y4 419 aa3.69□□□□□ -1.82
RNU4-4P-201ENST00000364588 MUC4Q99102 2169 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 IGLV2-18A0A075B6J9 118 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 A0A0G2JRQ6 117 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 SMIM31A0A1B0GVY4 71 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 HELTA6NFD8 242 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 CORTO00230 105 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 RTL8CO15255 209 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 IGKV1-17P01599 117 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 P0C879 139 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 RCVRNP35243 200 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 SUB1P53999 127 aaKnown RBP eCLIP3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 EMP1P54849 157 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 PIGPP57054 158 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 TRIM16LQ309B1 348 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 POM121L12Q8N7R1 296 aa3.68□□□□□ -1.82
RNU4-4P-201ENST00000364588 CSNK1G2-AS1Q8NCQ2 148 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms