RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 NOTCH1P46531 2555 aa8.21□□□□□ -1.09
SNX6-201ENST00000362031 TRAV30A0A087WSZ9 112 aa8.21□□□□□ -1.1
SNX6-201ENST00000362031 IGHV3-49A0A0A0MS15 119 aa8.21□□□□□ -1.1
SNX6-201ENST00000362031 WI2-2373I1.2A0A1W2PRP0 233 aa8.21□□□□□ -1.1
SNX6-201ENST00000362031 ZNF320A2RRD8 509 aa8.21□□□□□ -1.1
SNX6-201ENST00000362031 SCAF4O95104 1147 aaKnown RBP8.21□□□□□ -1.1
SNX6-201ENST00000362031 TSPAN15O95858 294 aa8.21□□□□□ -1.1
SNX6-201ENST00000362031 TOMM40O96008 361 aa8.21□□□□□ -1.1
SNX6-201ENST00000362031 IL4P05112 153 aa8.21□□□□□ -1.1
SNX6-201ENST00000362031 ELLP55199 621 aaPredicted RBP8.21□□□□□ -1.1
SNX6-201ENST00000362031 RPEL1Q2QD12 228 aa8.21□□□□□ -1.1
SNX6-201ENST00000362031 TM4SF20Q53R12 229 aa8.21□□□□□ -1.1
SNX6-201ENST00000362031 MORN5Q5VZ52 161 aa8.21□□□□□ -1.1
SNX6-201ENST00000362031 STOML3Q8TAV4 291 aa8.21□□□□□ -1.1
SNX6-201ENST00000362031 SCGB1C1Q8TD33 95 aa8.21□□□□□ -1.1
SNX6-201ENST00000362031 ST8SIA2Q92186 375 aa8.21□□□□□ -1.1
SNX6-201ENST00000362031 UHRF2Q96PU4 802 aa8.21□□□□□ -1.1
SNX6-201ENST00000362031 PXMP4Q9Y6I8 212 aa8.21□□□□□ -1.1
SNX6-201ENST00000362031 IGHV3OR16-13A0A075B7E8 117 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 IGHV3-74A0A0B4J1X5 117 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 SPP1P10451 314 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 ORM2P19652 201 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 S100PP25815 95 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 RPL29P47914 159 aaKnown RBP8.2□□□□□ -1.1
SNX6-201ENST00000362031 RIPPLY3P57055 190 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 CLLU1Q5K131 121 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 IL34Q6ZMJ4 242 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 ADAMTSL5Q6ZMM2 481 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 GPHB5Q86YW7 130 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 BAP18Q8IXM2 172 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 TMED6Q8WW62 240 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 C20orf24Q9BUV8 137 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 SAV1Q9H4B6 383 aaPredicted RBP8.2□□□□□ -1.1
SNX6-201ENST00000362031 SLC39A9Q9NUM3 307 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 BORCS7-ASMTA0A0B4J1R7 106 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 MPDU1O75352 247 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 FHITP49789 147 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 LYZP61626 148 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 SPATA31B1PQ5VZV4 182 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 LEMD1Q68G75 181 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 TMEM190Q8WZ59 177 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 RNF125Q96EQ8 232 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 PBDC1Q9BVG4 233 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 GAR1Q9NY12 217 aaKnown RBP8.2□□□□□ -1.1
SNX6-201ENST00000362031 DNAH3Q8TD57 4116 aa8.2□□□□□ -1.1
SNX6-201ENST00000362031 IGHV3-66A0A0C4DH42 116 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 KRBOX1C9JBD0 128 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 NDUFA4O00483 81 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 PCP4P48539 62 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 RAB2AP61019 212 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 BTN1A1Q13410 526 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 FFAR4Q5NUL3 377 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 FAM74A1Q5RGS3 127 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 SSX7Q7RTT5 188 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 OR1B1Q8NGR6 318 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 OR2G3Q8NGZ4 309 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 Q8WTZ3 238 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 DPF1Q92782 380 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 SEPSECSQ9HD40 501 aaKnown RBP8.19□□□□□ -1.1
SNX6-201ENST00000362031 GSN-AS1Q9NRJ2 163 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 MRPL27Q9P0M9 148 aaKnown RBP8.19□□□□□ -1.1
SNX6-201ENST00000362031 TMEM213A2RRL7 107 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 S100A8P05109 93 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 H2AFB1P0C5Y9 115 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 RAB31Q13636 194 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 ALKAL2Q6UX46 152 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 COMMD7Q86VX2 200 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 OR51M1Q9H341 326 aa8.19□□□□□ -1.1
SNX6-201ENST00000362031 SORL1Q92673 2214 aa8.18□□□□□ -1.1
SNX6-201ENST00000362031 TRAV5A0A0B4J249 113 aa8.18□□□□□ -1.1
SNX6-201ENST00000362031 TPT1P13693 172 aaKnown RBP8.18□□□□□ -1.1
SNX6-201ENST00000362031 AKR1D1P51857 326 aa8.18□□□□□ -1.1
SNX6-201ENST00000362031 SELENOTP62341 195 aa8.18□□□□□ -1.1
SNX6-201ENST00000362031 SHISA2Q6UWI4 295 aa8.18□□□□□ -1.1
SNX6-201ENST00000362031 RPP25LQ8N5L8 163 aaKnown RBP8.18□□□□□ -1.1
SNX6-201ENST00000362031 LINC00482Q8N8I6 264 aa8.18□□□□□ -1.1
SNX6-201ENST00000362031 ZNF709Q8N972 641 aa8.18□□□□□ -1.1
SNX6-201ENST00000362031 PSMG3Q9BT73 122 aaPredicted RBP8.18□□□□□ -1.1
SNX6-201ENST00000362031 BIN3Q9NQY0 253 aa8.18□□□□□ -1.1
SNX6-201ENST00000362031 RPRMQ9NS64 109 aa8.18□□□□□ -1.1
SNX6-201ENST00000362031 MED9Q9NWA0 146 aa8.18□□□□□ -1.1
SNX6-201ENST00000362031 TIMM9Q9Y5J7 89 aa8.18□□□□□ -1.1
SNX6-201ENST00000362031 OR5G3P0C626 314 aa8.17□□□□□ -1.1
SNX6-201ENST00000362031 MYCNOSP40205 109 aa8.17□□□□□ -1.1
SNX6-201ENST00000362031 RPL35P42766 123 aaKnown RBP8.17□□□□□ -1.1
SNX6-201ENST00000362031 PLP1P60201 277 aa8.17□□□□□ -1.1
SNX6-201ENST00000362031 COTL1Q14019 142 aa8.17□□□□□ -1.1
SNX6-201ENST00000362031 ZNF726P1Q15940 193 aa8.17□□□□□ -1.1
SNX6-201ENST00000362031 FAM106AQ4KMX7 169 aa8.17□□□□□ -1.1
SNX6-201ENST00000362031 C1QL4Q86Z23 238 aa8.17□□□□□ -1.1
SNX6-201ENST00000362031 C17orf112F2Z3M2 114 aa8.17□□□□□ -1.1
SNX6-201ENST00000362031 HMGB3O15347 200 aaKnown RBP8.17□□□□□ -1.1
SNX6-201ENST00000362031 HYPMO75409 117 aa8.17□□□□□ -1.1
SNX6-201ENST00000362031 SNRPCP09234 159 aaKnown RBP8.17□□□□□ -1.1
SNX6-201ENST00000362031 TEX261Q6UWH6 196 aa8.17□□□□□ -1.1
SNX6-201ENST00000362031 REC114Q7Z4M0 266 aa8.17□□□□□ -1.1
SNX6-201ENST00000362031 OR9G4Q8NGQ1 327 aa8.17□□□□□ -1.1
SNX6-201ENST00000362031 GNPNAT1Q96EK6 184 aaPredicted RBP8.17□□□□□ -1.1
SNX6-201ENST00000362031 SCRT1Q9BWW7 348 aa8.17□□□□□ -1.1
SNX6-201ENST00000362031 DNAJC4Q9NNZ3 241 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms