RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 TNFSF4P23510 183 aa8.46□□□□□ -1.06
SMC3-201ENST00000361804 C1orf185Q5T7R7 199 aa8.46□□□□□ -1.06
SMC3-201ENST00000361804 MRPL32Q9BYC8 188 aaKnown RBP8.46□□□□□ -1.06
SMC3-201ENST00000361804 FLNCQ14315 2725 aa8.45□□□□□ -1.06
SMC3-201ENST00000361804 SPTBN4Q9H254 2564 aa8.45□□□□□ -1.06
SMC3-201ENST00000361804 NBEAP1P0C6P0 100 aa8.45□□□□□ -1.06
SMC3-201ENST00000361804 CA7P43166 264 aa8.45□□□□□ -1.06
SMC3-201ENST00000361804 BCL6BQ8N143 479 aaPredicted RBP8.45□□□□□ -1.06
SMC3-201ENST00000361804 ZFP30Q9Y2G7 519 aa8.45□□□□□ -1.06
SMC3-201ENST00000361804 LYZP61626 148 aa8.45□□□□□ -1.06
SMC3-201ENST00000361804 TPPP3Q9BW30 176 aa8.45□□□□□ -1.06
SMC3-201ENST00000361804 GAL3ST2Q9H3Q3 398 aa8.45□□□□□ -1.06
SMC3-201ENST00000361804 ARL2-SNX15V9GYD0 113 aa8.45□□□□□ -1.06
SMC3-201ENST00000361804 IGLC7A0M8Q6 106 aa8.45□□□□□ -1.06
SMC3-201ENST00000361804 C17orf100A8MU93 164 aa8.45□□□□□ -1.06
SMC3-201ENST00000361804 FAM120AOSQ5T036 256 aa8.45□□□□□ -1.06
SMC3-201ENST00000361804 TEX36Q5VZQ5 186 aa8.45□□□□□ -1.06
SMC3-201ENST00000361804 Q6ZS92 163 aa8.45□□□□□ -1.06
SMC3-201ENST00000361804 TMEM167AQ8TBQ9 72 aa8.45□□□□□ -1.06
SMC3-201ENST00000361804 NKX6-3A6NJ46 265 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 KLK10O43240 276 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 FXYD7P58549 80 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 RNASE8Q8TDE3 154 aaKnown RBP8.44□□□□□ -1.06
SMC3-201ENST00000361804 CACNG8Q8WXS5 425 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 LINC00574Q9H8X3 128 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 SPTBN1Q01082 2364 aaKnown RBP8.44□□□□□ -1.06
SMC3-201ENST00000361804 IGF2RP11717 2491 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 PPIAL4EA0A075B759 164 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 PPIAL4DF5H284 164 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 PPIAL4FP0DN26 164 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 COX7A1P24310 79 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 MYCNOSP40205 109 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 BPIFB3P59826 476 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 PRNTQ86SH4 94 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 FAM169BQ8N8A8 192 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 Q9H3A6 140 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 IGHV1-24A0A0C4DH33 117 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 A0A0G2JNJ9 132 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 THBDP07204 575 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 LOXP28300 417 aaPredicted RBP8.44□□□□□ -1.06
SMC3-201ENST00000361804 RBM14Q96PK6 669 aaKnown RBP8.44□□□□□ -1.06
SMC3-201ENST00000361804 Q9UFV3 132 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 GOLT1AQ6ZVE7 132 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 OR4F17Q8NGA8 305 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 OR8B3Q8NGG8 313 aa8.44□□□□□ -1.06
SMC3-201ENST00000361804 TMEM178BH3BS89 294 aa8.43□□□□□ -1.06
SMC3-201ENST00000361804 KLF17Q5JT82 389 aaPredicted RBP8.43□□□□□ -1.06
SMC3-201ENST00000361804 OR1L4Q8NGR5 311 aa8.43□□□□□ -1.06
SMC3-201ENST00000361804 C19orf24Q9BVV8 132 aa8.43□□□□□ -1.06
SMC3-201ENST00000361804 FBXL15Q9H469 300 aa8.43□□□□□ -1.06
SMC3-201ENST00000361804 RAB9BQ9NP90 201 aa8.43□□□□□ -1.06
SMC3-201ENST00000361804 WASHC3Q9Y3C0 194 aa8.43□□□□□ -1.06
SMC3-201ENST00000361804 A0A1B0GXF2 115 aa8.43□□□□□ -1.06
SMC3-201ENST00000361804 OR4C46A6NHA9 309 aa8.43□□□□□ -1.06
SMC3-201ENST00000361804 LY6HO94772 140 aa8.43□□□□□ -1.06
SMC3-201ENST00000361804 HIST1H1EP10412 219 aaKnown RBP8.43□□□□□ -1.06
SMC3-201ENST00000361804 PTTG1IPP53801 180 aa8.43□□□□□ -1.06
SMC3-201ENST00000361804 GAGE1Q13065 139 aa8.43□□□□□ -1.06
SMC3-201ENST00000361804 RPP21Q9H633 154 aaKnown RBP8.43□□□□□ -1.06
SMC3-201ENST00000361804 ANKHD1Q8IWZ3 2542 aaKnown RBP8.43□□□□□ -1.06
SMC3-201ENST00000361804 P01737 135 aa8.43□□□□□ -1.06
SMC3-201ENST00000361804 FBLN7Q53RD9 439 aa8.43□□□□□ -1.06
SMC3-201ENST00000361804 PRR30Q53SZ7 412 aaPredicted RBP8.43□□□□□ -1.06
SMC3-201ENST00000361804 MPV17L2Q567V2 206 aa8.43□□□□□ -1.06
SMC3-201ENST00000361804 TRAV9-2A0A087WT02 112 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 NDUFB3O43676 98 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 RBP4P02753 201 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 GP9P14770 177 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 FAM231DQ6ZW35 169 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 TEX45Q8NA69 505 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 GPR82Q96P67 336 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 MRPL27Q9P0M9 148 aaKnown RBP8.42□□□□□ -1.06
SMC3-201ENST00000361804 TMSB15BA0A087X1C1 80 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 ZNF785A8K8V0 405 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 FAM106CPP0CH98 169 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 PSG1P11464 419 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 NBL1P41271 181 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 HBBP68871 147 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 FAM106AQ4KMX7 169 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 MLST8Q9BVC4 326 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 TCRAP04437 139 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 TMEM108Q6UXF1 575 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 ASCL5Q7RTU5 278 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 THAP8Q8NA92 274 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 ZNF596Q8TC21 504 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 WIPF2Q8TF74 440 aaPredicted RBP8.42□□□□□ -1.06
SMC3-201ENST00000361804 NCOR1P1Q9H4R4 102 aa8.42□□□□□ -1.06
SMC3-201ENST00000361804 IGHV3OR16-8A0A075B7F1 116 aa8.41□□□□□ -1.06
SMC3-201ENST00000361804 M0R3E3 92 aa8.41□□□□□ -1.06
SMC3-201ENST00000361804 TNFRSF1AP19438 455 aa8.41□□□□□ -1.06
SMC3-201ENST00000361804 CDSNQ15517 529 aa8.41□□□□□ -1.06
SMC3-201ENST00000361804 PERPQ96FX8 193 aa8.41□□□□□ -1.06
SMC3-201ENST00000361804 RNF24Q9Y225 148 aa8.41□□□□□ -1.06
SMC3-201ENST00000361804 PTPRQQ9UMZ3 2332 aa8.41□□□□□ -1.06
SMC3-201ENST00000361804 C20orf202A1L168 122 aa8.41□□□□□ -1.06
SMC3-201ENST00000361804 CEACAM8P31997 349 aaPredicted RBP8.41□□□□□ -1.06
SMC3-201ENST00000361804 IGHV1-8P0DP01 117 aa8.41□□□□□ -1.06
SMC3-201ENST00000361804 COL8A1P27658 744 aa8.41□□□□□ -1.06
SMC3-201ENST00000361804 RPL27AP46776 148 aaKnown RBP8.41□□□□□ -1.06
SMC3-201ENST00000361804 TMEM70Q9BUB7 260 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms