RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 ZNF138P52744 262 aa10.96□□□□□ -0.65
LDB3-202ENST00000361373 EMP1P54849 157 aa10.96□□□□□ -0.65
LDB3-202ENST00000361373 LINC01559Q495D7 138 aa10.96□□□□□ -0.65
LDB3-202ENST00000361373 Q6ZR03 302 aa10.96□□□□□ -0.65
LDB3-202ENST00000361373 DPH3Q96FX2 82 aa10.96□□□□□ -0.65
LDB3-202ENST00000361373 PEF1Q9UBV8 284 aaKnown RBP10.96□□□□□ -0.65
LDB3-202ENST00000361373 RFNGQ9Y644 331 aa10.96□□□□□ -0.65
LDB3-202ENST00000361373 NUP210Q8TEM1 1887 aaPredicted RBP10.96□□□□□ -0.65
LDB3-202ENST00000361373 FRMPD3Q5JV73 1810 aa10.96□□□□□ -0.65
LDB3-202ENST00000361373 LOC107984156A0A0G2JMH3 177 aa10.96□□□□□ -0.65
LDB3-202ENST00000361373 RNF223E7ERA6 249 aa10.96□□□□□ -0.65
LDB3-202ENST00000361373 IFI27P40305 119 aaPredicted RBP10.96□□□□□ -0.65
LDB3-202ENST00000361373 ARL17AQ8IVW1 177 aa10.96□□□□□ -0.65
LDB3-202ENST00000361373 C11orf44Q8N8P7 122 aa10.96□□□□□ -0.65
LDB3-202ENST00000361373 TRGV4A0A0C4DH28 118 aa10.96□□□□□ -0.66
LDB3-202ENST00000361373 TDGF1P13385 188 aa10.96□□□□□ -0.66
LDB3-202ENST00000361373 HTN3P15516 51 aa10.96□□□□□ -0.66
LDB3-202ENST00000361373 SRSF1Q07955 248 aaKnown RBP eCLIP10.96□□□□□ -0.66
LDB3-202ENST00000361373 FBLN7Q53RD9 439 aa10.96□□□□□ -0.66
LDB3-202ENST00000361373 GNB1LQ9BYB4 327 aa10.96□□□□□ -0.66
LDB3-202ENST00000361373 PHF3Q92576 2039 aaKnown RBP10.95□□□□□ -0.66
LDB3-202ENST00000361373 NOTCH4Q99466 2003 aa10.95□□□□□ -0.66
LDB3-202ENST00000361373 HINT1P49773 126 aaPredicted RBP10.95□□□□□ -0.66
LDB3-202ENST00000361373 TCTAP57738 103 aa10.95□□□□□ -0.66
LDB3-202ENST00000361373 RPP25LQ8N5L8 163 aaKnown RBP10.95□□□□□ -0.66
LDB3-202ENST00000361373 KIR3DL3Q8N743 410 aa10.95□□□□□ -0.66
LDB3-202ENST00000361373 FAM110DQ8TAY7 271 aaPredicted RBP10.95□□□□□ -0.66
LDB3-202ENST00000361373 SCRT1Q9BWW7 348 aa10.95□□□□□ -0.66
LDB3-202ENST00000361373 CYTL1Q9NRR1 136 aa10.95□□□□□ -0.66
LDB3-202ENST00000361373 KAAG1Q9UBP8 84 aa10.95□□□□□ -0.66
LDB3-202ENST00000361373 C15orf62A8K5M9 175 aa10.95□□□□□ -0.66
LDB3-202ENST00000361373 TCRAP04437 139 aa10.95□□□□□ -0.66
LDB3-202ENST00000361373 TMEM170AQ8WVE7 144 aa10.95□□□□□ -0.66
LDB3-202ENST00000361373 AGMATQ9BSE5 352 aa10.95□□□□□ -0.66
LDB3-202ENST00000361373 DAZ1Q9NQZ3 744 aaKnown RBP10.95□□□□□ -0.66
LDB3-202ENST00000361373 PDE6HQ13956 83 aa10.95□□□□□ -0.66
LDB3-202ENST00000361373 MRAP2Q96G30 205 aa10.95□□□□□ -0.66
LDB3-202ENST00000361373 C18orf15Q96N68 181 aa10.95□□□□□ -0.66
LDB3-202ENST00000361373 VCX2Q9H322 139 aa10.95□□□□□ -0.66
LDB3-202ENST00000361373 ANAPC10Q9UM13 185 aa10.95□□□□□ -0.66
LDB3-202ENST00000361373 CYSLTR1Q9Y271 337 aa10.95□□□□□ -0.66
LDB3-202ENST00000361373 TRAV5A0A0B4J249 113 aa10.94□□□□□ -0.66
LDB3-202ENST00000361373 MUC21A0A0G2JKD1 596 aa10.94□□□□□ -0.66
LDB3-202ENST00000361373 MUC21A0A140T8X8 626 aa10.94□□□□□ -0.66
LDB3-202ENST00000361373 LYL1P12980 280 aa10.94□□□□□ -0.66
LDB3-202ENST00000361373 TTC9CQ8N5M4 171 aa10.94□□□□□ -0.66
LDB3-202ENST00000361373 ABCA1O95477 2261 aa10.94□□□□□ -0.66
LDB3-202ENST00000361373 ZFHX2Q9C0A1 2572 aaPredicted RBP10.94□□□□□ -0.66
LDB3-202ENST00000361373 GAGE10A6NGK3 116 aa10.94□□□□□ -0.66
LDB3-202ENST00000361373 NDUFB8O95169 186 aa10.94□□□□□ -0.66
LDB3-202ENST00000361373 RNF138Q8WVD3 245 aa10.94□□□□□ -0.66
LDB3-202ENST00000361373 PCNX1Q96RV3 2341 aa10.94□□□□□ -0.66
LDB3-202ENST00000361373 KLHL30-AS1Q8NEE0 82 aa10.94□□□□□ -0.66
LDB3-202ENST00000361373 K7ERU9 68 aa10.94□□□□□ -0.66
LDB3-202ENST00000361373 RPL15P61313 204 aaKnown RBP10.94□□□□□ -0.66
LDB3-202ENST00000361373 KLF17Q5JT82 389 aaPredicted RBP10.94□□□□□ -0.66
LDB3-202ENST00000361373 FOXC2Q99958 501 aa10.94□□□□□ -0.66
LDB3-202ENST00000361373 VSIRQ9H7M9 311 aa10.94□□□□□ -0.66
LDB3-202ENST00000361373 FANCMQ8IYD8 2048 aa10.94□□□□□ -0.66
LDB3-202ENST00000361373 LOXP28300 417 aaPredicted RBP10.93□□□□□ -0.66
LDB3-202ENST00000361373 RASL11AQ6T310 242 aa10.93□□□□□ -0.66
LDB3-202ENST00000361373 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.93□□□□□ -0.66
LDB3-202ENST00000361373 IGKV1-16P04430 117 aa10.93□□□□□ -0.66
LDB3-202ENST00000361373 NTF4P34130 210 aa10.93□□□□□ -0.66
LDB3-202ENST00000361373 CFAP161Q6P656 301 aa10.93□□□□□ -0.66
LDB3-202ENST00000361373 ZNF833PQ6ZTB9 187 aa10.93□□□□□ -0.66
LDB3-202ENST00000361373 DDTP30046 118 aa10.93□□□□□ -0.66
LDB3-202ENST00000361373 C1orf147Q96MC9 270 aaPredicted RBP10.93□□□□□ -0.66
LDB3-202ENST00000361373 H7C2G1 150 aa10.93□□□□□ -0.66
LDB3-202ENST00000361373 UQCRFS1P47985 274 aa10.93□□□□□ -0.66
LDB3-202ENST00000361373 SEPSECSQ9HD40 501 aaKnown RBP10.93□□□□□ -0.66
LDB3-202ENST00000361373 E9PQ18 207 aa10.93□□□□□ -0.66
LDB3-202ENST00000361373 HBDP02042 147 aa10.93□□□□□ -0.66
LDB3-202ENST00000361373 YPEL3P61236 119 aaPredicted RBP10.93□□□□□ -0.66
LDB3-202ENST00000361373 COTL1Q14019 142 aa10.93□□□□□ -0.66
LDB3-202ENST00000361373 LCNL1Q6ZST4 164 aa10.93□□□□□ -0.66
LDB3-202ENST00000361373 DMRT1Q9Y5R6 373 aa10.93□□□□□ -0.66
LDB3-202ENST00000361373 FER1L5A0AVI2 2057 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 TRAV8-6A0A0B4J262 113 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 NPIPB5A8MRT5 1133 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 C1orf122Q6ZSJ8 110 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 SMIM12Q96EX1 92 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 RHPN1-AS1Q9BWJ2 59 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 IGKV1-6A0A0C4DH72 117 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 CD33P20138 364 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 PRADC1Q9BSG0 188 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 ZNF581Q9P0T4 197 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 TRBV24-1A0A075B6N3 115 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 ZNF415Q09FC8 603 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 FOXL1Q12952 345 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 PRDM13Q9H4Q3 707 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 TMEM14BQ9NUH8 114 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 LRRK1Q38SD2 2015 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 ZNF688P0C7X2 276 aa10.92□□□□□ -0.66
LDB3-202ENST00000361373 BDP1A6H8Y1 2624 aa10.91□□□□□ -0.66
LDB3-202ENST00000361373 A0A1W2PPI3 338 aa10.91□□□□□ -0.66
LDB3-202ENST00000361373 DNAL4O96015 105 aa10.91□□□□□ -0.66
LDB3-202ENST00000361373 NUDT10Q8NFP7 164 aa10.91□□□□□ -0.66
LDB3-202ENST00000361373 NUDT11Q96G61 164 aa10.91□□□□□ -0.66
LDB3-202ENST00000361373 BEX4Q9NWD9 120 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms