RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 WDR73Q6P4I2 378 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 WFDC11Q8NEX6 87 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 GNB1LQ9BYB4 327 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 MRPL32Q9BYC8 188 aaKnown RBP10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 OSTCQ9NRP0 149 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 AKAP9Q99996 3911 aa10.47□□□□□ -0.73
SQSTM1-201ENST00000360718 A0A1W2PRE2 83 aa10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 ZNF705FA8MVS1 300 aaPredicted RBP10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 J3QLI3 93 aa10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 TGFAP01135 160 aa10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 OR5G3P0C626 314 aa10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 FAM106CPP0CH98 169 aa10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 ZNF705DP0CH99 300 aaPredicted RBP10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 ZNF705BP0CI00 300 aaPredicted RBP10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 C8orf88P0DMB2 117 aa10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 CBLN1P23435 193 aa10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 CD24P25063 80 aa10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 CNTFRP26992 372 aa10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 CRYBB3P26998 211 aa10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 CENPWQ5EE01 88 aa10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 PPP1R27Q86WC6 154 aa10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 SIGLEC9Q9Y336 463 aa10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 V9GYV3 84 aa10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 FLNAP21333 2647 aaKnown RBP10.46□□□□□ -0.73
SQSTM1-201ENST00000360718 NBR2O15453 112 aa10.46□□□□□ -0.74
SQSTM1-201ENST00000360718 CD69Q07108 199 aa10.46□□□□□ -0.74
SQSTM1-201ENST00000360718 Q0VG73 95 aa10.46□□□□□ -0.74
SQSTM1-201ENST00000360718 RUSC1-AS1Q66K80 236 aa10.46□□□□□ -0.74
SQSTM1-201ENST00000360718 BAGE3Q86Y29 109 aa10.46□□□□□ -0.74
SQSTM1-201ENST00000360718 BAGE2Q86Y30 109 aa10.46□□□□□ -0.74
SQSTM1-201ENST00000360718 A0A1W2PN81 502 aa10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 GRIFINA4D1Z8 144 aa10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 NUPR1O60356 82 aa10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 IGHV4-38-2P0DP08 117 aa10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 RNASE2P10153 161 aaKnown RBP10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 IER3P46695 156 aa10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 FBXL15Q9H469 300 aa10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 TPSG1Q9NRR2 321 aa10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 NDUFA4L2Q9NRX3 87 aa10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 NAV3Q8IVL0 2385 aa10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 SNURFLB1AK76 121 aa10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 ISLRO14498 428 aa10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 CRYGBP07316 175 aa10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 TMEM11P17152 192 aa10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 TNXAQ16473 311 aa10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 MRGPRG-AS1Q2M3A8 158 aa10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 MRPL52Q86TS9 123 aaKnown RBP10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 CIARTQ8N365 385 aaPredicted RBP10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 SOX21Q9Y651 276 aaPredicted RBP10.45□□□□□ -0.74
SQSTM1-201ENST00000360718 INS-IGF2F8WCM5 200 aa10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 IGHV4-31P0DP07 118 aa10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 SUMO1P63165 101 aaKnown RBP10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 CX3CL1P78423 397 aa10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 OR5I1Q13606 314 aa10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 BRD3OSQ6XYD6 125 aa10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 OR8I2Q8N0Y5 310 aa10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 NPBQ8NG41 125 aa10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 OR5AU1Q8NGC0 362 aa10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 SLC25A33Q9BSK2 321 aa10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 C1RLQ9NZP8 487 aa10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 TLN2Q9Y4G6 2542 aa10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 IGKV1OR2-108A0A075B7D4 117 aa10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 A0A1B0GUS0 222 aa10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 NCBP2LA6PVI3 153 aaKnown RBP10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 RPL27AP46776 148 aaKnown RBP10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 SUB1P53999 127 aaKnown RBP eCLIP10.44□□□□□ -0.743e-7■■■■□ 26.7
SQSTM1-201ENST00000360718 EBI3Q14213 229 aa10.44□□□□□ -0.74
SQSTM1-201ENST00000360718 KIR2DL5BA0A0G2JN68 375 aa10.43□□□□□ -0.74
SQSTM1-201ENST00000360718 KIR2DL5BA0A0G2JPC4 375 aa10.43□□□□□ -0.74
SQSTM1-201ENST00000360718 M0R143 59 aa10.43□□□□□ -0.74
SQSTM1-201ENST00000360718 SERF1AO75920 110 aa10.43□□□□□ -0.74
SQSTM1-201ENST00000360718 NDUFA3O95167 84 aa10.43□□□□□ -0.74
SQSTM1-201ENST00000360718 KLF17Q5JT82 389 aaPredicted RBP10.43□□□□□ -0.74
SQSTM1-201ENST00000360718 KIR2DL5AQ8N109 375 aa10.43□□□□□ -0.74
SQSTM1-201ENST00000360718 OR1L4Q8NGR5 311 aa10.43□□□□□ -0.74
SQSTM1-201ENST00000360718 ZNF503Q96F45 646 aa10.43□□□□□ -0.74
SQSTM1-201ENST00000360718 SAMD10Q9BYL1 202 aa10.43□□□□□ -0.74
SQSTM1-201ENST00000360718 DNAJC4Q9NNZ3 241 aa10.43□□□□□ -0.74
SQSTM1-201ENST00000360718 PPP1R14DQ9NXH3 145 aa10.43□□□□□ -0.74
SQSTM1-201ENST00000360718 NOTCH2Q04721 2471 aa10.43□□□□□ -0.74
SQSTM1-201ENST00000360718 CNIH1O95406 144 aa10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 SNRPCP09234 159 aaKnown RBP10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 RAB4AP20338 218 aa10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 GATA2P23769 480 aaPredicted RBP10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 COMPP49747 757 aaPredicted RBP10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 CYB5R2Q6BCY4 276 aa10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 OR10W1Q8NGF6 305 aa10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 NAT8BQ9UHF3 227 aa10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 MYO9AB2RTY4 2548 aa10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 E7EUB6 86 aa10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 M0QZK8 103 aa10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 C5orf64Q2M2E5 130 aa10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 OR10J3Q5JRS4 329 aa10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 C10orf55Q5SWW7 151 aa10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 FAM120AOSQ5T036 256 aa10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 IBA57Q5T440 356 aaKnown RBP10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 Q8N6K4 173 aa10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 ARL6IP6Q8N6S5 226 aa10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 TMEM68Q96MH6 324 aa10.42□□□□□ -0.74
SQSTM1-201ENST00000360718 FOXC2Q99958 501 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms