RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 MOB3BQ86TA1 216 aa11.07□□□□□ -0.64
CSNK1E-201ENST00000359867 CIARTQ8N365 385 aaPredicted RBP11.07□□□□□ -0.64
CSNK1E-201ENST00000359867 C1orf159Q96HA4 380 aa11.07□□□□□ -0.64
CSNK1E-201ENST00000359867 PXMP4Q9Y6I8 212 aa11.07□□□□□ -0.64
CSNK1E-201ENST00000359867 MDFIC2A0A1B0GVS7 189 aa11.07□□□□□ -0.64
CSNK1E-201ENST00000359867 SLC25A17O43808 307 aa11.07□□□□□ -0.64
CSNK1E-201ENST00000359867 CRYGBP07316 175 aa11.07□□□□□ -0.64
CSNK1E-201ENST00000359867 TMEM144Q7Z5S9 345 aa11.07□□□□□ -0.64
CSNK1E-201ENST00000359867 MMD2Q8IY49 270 aa11.07□□□□□ -0.64
CSNK1E-201ENST00000359867 CACNG8Q8WXS5 425 aa11.07□□□□□ -0.64
CSNK1E-201ENST00000359867 FOXC2Q99958 501 aa11.07□□□□□ -0.64
CSNK1E-201ENST00000359867 LAMTOR2Q9Y2Q5 125 aa11.07□□□□□ -0.64
CSNK1E-201ENST00000359867 SLC17A3O00476 420 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 SUB1P53999 127 aaKnown RBP eCLIP11.06□□□□□ -0.641e-6■■■■■ 30.8
CSNK1E-201ENST00000359867 ZNF738Q8NE65 137 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 OR10W1Q8NGF6 305 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 SFRP2Q96HF1 295 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 CSPG4Q6UVK1 2322 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 TEX15Q9BXT5 2789 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 IGHV3-72A0A0B4J1Y9 119 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 FRMD6-AS1P0C7T7 363 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 CBLN1P23435 193 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 HTR1DP28221 377 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 CEACAM3P40198 252 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 HINT1P49773 126 aaPredicted RBP11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 MRGPRG-AS1Q2M3A8 158 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 SPATA31B1PQ5VZV4 182 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 RITA1Q96K30 269 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 DPM3Q9P2X0 92 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 OTOGQ6ZRI0 2925 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 ABCA1O95477 2261 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 TLN2Q9Y4G6 2542 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 ACANP16112 2415 aa11.06□□□□□ -0.64
CSNK1E-201ENST00000359867 CGB1A6NKQ9 187 aa11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 PDE6DO43924 150 aa11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 COMPP49747 757 aaPredicted RBP11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 RANP62826 216 aaKnown RBP11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 CD69Q07108 199 aa11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 LOXL1Q08397 574 aaPredicted RBP11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 KLRD1Q13241 179 aa11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 OCC1Q8TAD7 63 aa11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 E7EUB6 86 aa11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 MSMBP08118 114 aa11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 PSG5Q15238 335 aa11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 RNF114Q9Y508 228 aa11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 YTHDF2Q9Y5A9 579 aaKnown RBP11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 A0A1W2PPI3 338 aa11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 ODF3BA8MYP8 253 aa11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 SMAD7O15105 426 aaKnown RBP11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 NBEAP1P0C6P0 100 aa11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 VMO1Q7Z5L0 202 aa11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 SIGLEC9Q9Y336 463 aa11.05□□□□□ -0.64
CSNK1E-201ENST00000359867 B4DSR2 109 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 PRR20EP86478 221 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 PRR20CP86479 221 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 PRR20DP86480 221 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 PRR20BP86481 221 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 PRR20AP86496 221 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 WT1-ASQ06250 92 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 A0A1W2PRD5 423 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 A0A1W2PRF3 423 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 A0A1W2PRM7 423 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 F2Z2F3 143 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 PSG1P11464 419 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 HCP5Q6MZN7 132 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 CMTM2Q8TAZ6 248 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 SIRPDQ9H106 197 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 TPSG1Q9NRR2 321 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 HIF1ANQ9NWT6 349 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 SLC45A2Q9UMX9 530 aa11.04□□□□□ -0.64
CSNK1E-201ENST00000359867 SPINK4O60575 86 aa11.03□□□□□ -0.64
CSNK1E-201ENST00000359867 ACTL6BO94805 426 aa11.03□□□□□ -0.64
CSNK1E-201ENST00000359867 ZNF90Q03938 601 aa11.03□□□□□ -0.64
CSNK1E-201ENST00000359867 Q6ZN92 141 aa11.03□□□□□ -0.64
CSNK1E-201ENST00000359867 STPG3Q8N7X2 389 aa11.03□□□□□ -0.64
CSNK1E-201ENST00000359867 HSPB9Q9BQS6 159 aa11.03□□□□□ -0.64
CSNK1E-201ENST00000359867 TP53TG3Q9ULZ0 132 aa11.03□□□□□ -0.64
CSNK1E-201ENST00000359867 K7EN84 100 aa11.03□□□□□ -0.64
CSNK1E-201ENST00000359867 TOX4O94842 621 aa11.03□□□□□ -0.64
CSNK1E-201ENST00000359867 TGFAP01135 160 aa11.03□□□□□ -0.64
CSNK1E-201ENST00000359867 IGHV4-31P0DP07 118 aa11.03□□□□□ -0.64
CSNK1E-201ENST00000359867 RPL27AP46776 148 aaKnown RBP11.03□□□□□ -0.64
CSNK1E-201ENST00000359867 C10orf55Q5SWW7 151 aa11.03□□□□□ -0.64
CSNK1E-201ENST00000359867 PVRIGQ6DKI7 326 aa11.03□□□□□ -0.64
CSNK1E-201ENST00000359867 PPP1R27Q86WC6 154 aa11.03□□□□□ -0.64
CSNK1E-201ENST00000359867 OR10G8Q8NGN5 311 aa11.03□□□□□ -0.64
CSNK1E-201ENST00000359867 OOSP1A8MZH6 123 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 STAG3L2P0CL84 134 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 STAG3L3P0CL85 134 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 RHOBP62745 196 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 LINC01356Q8N9X3 169 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 ZFHX3Q15911 3703 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 TIMM23O14925 209 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 HYPMO75409 117 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 CXorf1O96002 111 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 LINC00869P0C866 280 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 CD99P14209 185 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 CNTFRP26992 372 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 CTRLP40313 264 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 LINC00310P59036 64 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms