RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CD5P06127 495 aa10.75□□□□□ -0.69
PDLIM5-203ENST00000359265 C8orf88P0DMB2 117 aa10.75□□□□□ -0.69
PDLIM5-203ENST00000359265 BCL2P10415 239 aa10.75□□□□□ -0.69
PDLIM5-203ENST00000359265 ZNF506Q5JVG8 444 aa10.75□□□□□ -0.69
PDLIM5-203ENST00000359265 ZNF600Q6ZNG1 722 aa10.75□□□□□ -0.69
PDLIM5-203ENST00000359265 PQLC2Q6ZP29 291 aa10.75□□□□□ -0.69
PDLIM5-203ENST00000359265 S100A7AQ86SG5 101 aa10.75□□□□□ -0.69
PDLIM5-203ENST00000359265 SCRT1Q9BWW7 348 aa10.75□□□□□ -0.69
PDLIM5-203ENST00000359265 WI2-2373I1.2A0A1W2PRP0 233 aa10.74□□□□□ -0.69
PDLIM5-203ENST00000359265 FAM181BA6NEQ2 426 aa10.74□□□□□ -0.69
PDLIM5-203ENST00000359265 CTSGP08311 255 aa10.74□□□□□ -0.69
PDLIM5-203ENST00000359265 ZP3P21754 424 aa10.74□□□□□ -0.69
PDLIM5-203ENST00000359265 GCHFRP30047 84 aa10.74□□□□□ -0.69
PDLIM5-203ENST00000359265 SRSF3P84103 164 aaKnown RBP10.74□□□□□ -0.69
PDLIM5-203ENST00000359265 FAM209BQ5JX69 171 aa10.74□□□□□ -0.69
PDLIM5-203ENST00000359265 CLEC19AQ6UXS0 136 aa10.74□□□□□ -0.69
PDLIM5-203ENST00000359265 PATE2Q6UY27 113 aa10.74□□□□□ -0.69
PDLIM5-203ENST00000359265 LINC00305Q7Z4B0 112 aa10.74□□□□□ -0.69
PDLIM5-203ENST00000359265 RNF125Q96EQ8 232 aa10.74□□□□□ -0.69
PDLIM5-203ENST00000359265 MGAM2Q2M2H8 2515 aa10.74□□□□□ -0.69
PDLIM5-203ENST00000359265 TGOLN2O43493 480 aa10.73□□□□□ -0.69
PDLIM5-203ENST00000359265 OR7C2O60412 319 aa10.73□□□□□ -0.69
PDLIM5-203ENST00000359265 OR2C1O95371 312 aa10.73□□□□□ -0.69
PDLIM5-203ENST00000359265 IL4P05112 153 aa10.73□□□□□ -0.69
PDLIM5-203ENST00000359265 CLEC3BP05452 202 aa10.73□□□□□ -0.69
PDLIM5-203ENST00000359265 ADMP35318 185 aa10.73□□□□□ -0.69
PDLIM5-203ENST00000359265 RAB9AP51151 201 aa10.73□□□□□ -0.69
PDLIM5-203ENST00000359265 UHRF2Q96PU4 802 aa10.73□□□□□ -0.69
PDLIM5-203ENST00000359265 CHRDL1Q9BU40 450 aa10.73□□□□□ -0.69
PDLIM5-203ENST00000359265 TMPRSS5Q9H3S3 457 aa10.73□□□□□ -0.69
PDLIM5-203ENST00000359265 GNB4Q9HAV0 340 aa10.73□□□□□ -0.69
PDLIM5-203ENST00000359265 TMEM167BQ9NRX6 74 aa10.73□□□□□ -0.69
PDLIM5-203ENST00000359265 VAX2Q9UIW0 290 aa10.73□□□□□ -0.69
PDLIM5-203ENST00000359265 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 TMEM218A2RU14 115 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 HSPB1P04792 205 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 ELANEP08246 267 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 PSMB8P28062 276 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 S100A7P31151 101 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 RELQ04864 619 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 FOXE3Q13461 319 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 ICAM4Q14773 271 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 TEX38Q6PEX7 206 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 ZNF329Q86UD4 541 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 ZNF491Q8N8L2 437 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 STXBP6Q8NFX7 210 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 OR5AU1Q8NGC0 362 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 RXFP4Q8TDU9 374 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 LINC00052Q96N35 136 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 RARRES2Q99969 163 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 SLC25A2Q9BXI2 301 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 KLK15Q9H2R5 256 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 NOTCH1P46531 2555 aa10.72□□□□□ -0.69
PDLIM5-203ENST00000359265 BMPR1BO00238 502 aa10.71□□□□□ -0.69
PDLIM5-203ENST00000359265 SFTA3P0C7M3 94 aa10.71□□□□□ -0.69
PDLIM5-203ENST00000359265 ARL3P36405 182 aa10.71□□□□□ -0.69
PDLIM5-203ENST00000359265 UBE2L3P68036 154 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-203ENST00000359265 MORN5Q5VZ52 161 aa10.71□□□□□ -0.69
PDLIM5-203ENST00000359265 ZNF343Q6P1L6 599 aa10.71□□□□□ -0.69
PDLIM5-203ENST00000359265 Q6ZSV7 163 aa10.71□□□□□ -0.69
PDLIM5-203ENST00000359265 FAM167A-AS1Q96KT0 104 aa10.71□□□□□ -0.69
PDLIM5-203ENST00000359265 SLC25A39Q9BZJ4 359 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-203ENST00000359265 SERTAD4Q9NUC0 356 aa10.71□□□□□ -0.69
PDLIM5-203ENST00000359265 MRPL27Q9P0M9 148 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-203ENST00000359265 RNF24Q9Y225 148 aa10.71□□□□□ -0.69
PDLIM5-203ENST00000359265 PUS1Q9Y606 427 aaKnown RBP eCLIP10.71□□□□□ -0.69
PDLIM5-203ENST00000359265 ARL2-SNX15V9GYD0 113 aa10.71□□□□□ -0.69
PDLIM5-203ENST00000359265 TRAV5A0A0B4J249 113 aa10.7□□□□□ -0.7
PDLIM5-203ENST00000359265 H3BRN7 92 aa10.7□□□□□ -0.7
PDLIM5-203ENST00000359265 PAGE4O60829 102 aa10.7□□□□□ -0.7
PDLIM5-203ENST00000359265 NDUFS6O75380 124 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-203ENST00000359265 MEF2BQ02080 365 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-203ENST00000359265 USF2Q15853 346 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-203ENST00000359265 TXNDC17Q9BRA2 123 aa10.7□□□□□ -0.7
PDLIM5-203ENST00000359265 SHANK2-AS3Q9BTD1 123 aa10.7□□□□□ -0.7
PDLIM5-203ENST00000359265 PAXXQ9BUH6 204 aa10.7□□□□□ -0.7
PDLIM5-203ENST00000359265 SLC35B3Q9H1N7 401 aa10.7□□□□□ -0.7
PDLIM5-203ENST00000359265 OR51M1Q9H341 326 aa10.7□□□□□ -0.7
PDLIM5-203ENST00000359265 RABAC1Q9UI14 185 aa10.7□□□□□ -0.7
PDLIM5-203ENST00000359265 NBEAL2Q6ZNJ1 2754 aa10.7□□□□□ -0.7
PDLIM5-203ENST00000359265 TENM1Q9UKZ4 2725 aa10.7□□□□□ -0.7
PDLIM5-203ENST00000359265 PRKDCP78527 4128 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-203ENST00000359265 C9JQL5 133 aa10.69□□□□□ -0.7
PDLIM5-203ENST00000359265 PPP5D1E7EU14 171 aa10.69□□□□□ -0.7
PDLIM5-203ENST00000359265 F8W036 122 aa10.69□□□□□ -0.7
PDLIM5-203ENST00000359265 IGHV3-11P01762 117 aa10.69□□□□□ -0.7
PDLIM5-203ENST00000359265 SRP19P09132 144 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-203ENST00000359265 UBE2G2P60604 165 aa10.69□□□□□ -0.7
PDLIM5-203ENST00000359265 LCNL1Q6ZST4 164 aa10.69□□□□□ -0.7
PDLIM5-203ENST00000359265 OR4X2Q8NGF9 303 aa10.69□□□□□ -0.7
PDLIM5-203ENST00000359265 ZNF503Q96F45 646 aa10.69□□□□□ -0.7
PDLIM5-203ENST00000359265 SEC11CQ9BY50 192 aa10.69□□□□□ -0.7
PDLIM5-203ENST00000359265 TRRAPQ9Y4A5 3859 aa10.68□□□□□ -0.7
PDLIM5-203ENST00000359265 NDUFA7O95182 113 aa10.68□□□□□ -0.7
PDLIM5-203ENST00000359265 OR10J4P0C629 311 aa10.68□□□□□ -0.7
PDLIM5-203ENST00000359265 DEFA6Q01524 100 aa10.68□□□□□ -0.7
PDLIM5-203ENST00000359265 CST9LP1Q5W188 147 aa10.68□□□□□ -0.7
PDLIM5-203ENST00000359265 C10orf99Q6UWK7 81 aa10.68□□□□□ -0.7
PDLIM5-203ENST00000359265 TOMM20LQ6UXN7 152 aa10.68□□□□□ -0.7
PDLIM5-203ENST00000359265 RNF152Q8N8N0 203 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms