RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 RPL36AP83881 106 aaKnown RBP15.08■□□□□ 0
SHANK1-202ENST00000359082 RPL36ALQ969Q0 106 aaKnown RBP15.08■□□□□ 0
SHANK1-202ENST00000359082 CSTL1Q9H114 145 aa15.08■□□□□ 0
SHANK1-202ENST00000359082 TMEM178BH3BS89 294 aa15.08■□□□□ 0
SHANK1-202ENST00000359082 RASL10AQ92737 203 aa15.08■□□□□ 0
SHANK1-202ENST00000359082 H3BUX3 64 aa15.07■□□□□ 0
SHANK1-202ENST00000359082 EFNA4P52798 201 aa15.07■□□□□ 0
SHANK1-202ENST00000359082 CMC4P56277 68 aaPredicted RBP15.07■□□□□ 0
SHANK1-202ENST00000359082 ZNF625Q96I27 306 aaPredicted RBP15.07■□□□□ 0
SHANK1-202ENST00000359082 SMPXQ9UHP9 88 aa15.07■□□□□ 0
SHANK1-202ENST00000359082 RP1P56715 2156 aa15.07■□□□□ 0
SHANK1-202ENST00000359082 GGNQ86UU5 652 aa15.07■□□□□ 0
SHANK1-202ENST00000359082 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.07■□□□□ 0
SHANK1-202ENST00000359082 TNFSF13O75888 250 aa15.07■□□□□ 0
SHANK1-202ENST00000359082 ZFP36L1Q07352 338 aaKnown RBP15.07■□□□□ 0
SHANK1-202ENST00000359082 C5orf24Q7Z6I8 188 aa15.07■□□□□ 0
SHANK1-202ENST00000359082 TRBV7-1A0A0A6YYK4 115 aa15.07■□□□□ 0
SHANK1-202ENST00000359082 FBLN5Q9UBX5 448 aa15.07■□□□□ 0
SHANK1-202ENST00000359082 RFNGQ9Y644 331 aa15.07■□□□□ 0
SHANK1-202ENST00000359082 CSRP1P21291 193 aaKnown RBP15.07■□□□□ 0
SHANK1-202ENST00000359082 F8WEM9 126 aa15.06■□□□□ 0
SHANK1-202ENST00000359082 ITGB1BP1O14713 200 aa15.06■□□□□ 0
SHANK1-202ENST00000359082 GUSBP1Q15486 140 aa15.06■□□□□ 0
SHANK1-202ENST00000359082 PLEKHB2Q96CS7 222 aa15.06■□□□□ 0
SHANK1-202ENST00000359082 FAM90A2PQ658T7 463 aa15.06■□□□□ 0
SHANK1-202ENST00000359082 LCNL1Q6ZST4 164 aa15.06■□□□□ 0
SHANK1-202ENST00000359082 KLHL30-AS1Q8NEE0 82 aa15.06■□□□□ 0
SHANK1-202ENST00000359082 A0A1B0GWJ7 208 aa15.06■□□□□ 0
SHANK1-202ENST00000359082 ZNF138P52744 262 aa15.06■□□□□ 0
SHANK1-202ENST00000359082 BCL6BQ8N143 479 aaPredicted RBP15.06■□□□□ 0
SHANK1-202ENST00000359082 PSG3Q16557 428 aa15.06■□□□□ 0
SHANK1-202ENST00000359082 FAM166AQ6J272 317 aa15.06■□□□□ 0
SHANK1-202ENST00000359082 SLC25A48Q6ZT89 311 aaKnown RBP15.06■□□□□ 0
SHANK1-202ENST00000359082 SMKR1H3BMG3 65 aa15.05■□□□□ 0
SHANK1-202ENST00000359082 GREB1LQ9C091 1923 aaPredicted RBP15.05■□□□□ 0
SHANK1-202ENST00000359082 C14orf178Q8N769 122 aaPredicted RBP15.05■□□□□ 0
SHANK1-202ENST00000359082 BMPERQ8N8U9 685 aa15.05■□□□□ 0
SHANK1-202ENST00000359082 A0A087WWL8 130 aa15.05■□□□□ -0
SHANK1-202ENST00000359082 H0YJW9 148 aa15.05■□□□□ -0
SHANK1-202ENST00000359082 MPZP25189 248 aa15.05■□□□□ -0
SHANK1-202ENST00000359082 NABP1Q96AH0 204 aa15.05■□□□□ -0
SHANK1-202ENST00000359082 LCN12Q6JVE5 192 aa15.05■□□□□ -0
SHANK1-202ENST00000359082 PIP4P2Q8N4L2 257 aa15.05■□□□□ -0
SHANK1-202ENST00000359082 UNC13CQ8NB66 2214 aa15.05■□□□□ -0
SHANK1-202ENST00000359082 TNFRSF6BO95407 300 aa15.05■□□□□ -0
SHANK1-202ENST00000359082 AMBPP02760 352 aa15.05■□□□□ -0
SHANK1-202ENST00000359082 NUP35Q8NFH5 326 aa15.05■□□□□ -0
SHANK1-202ENST00000359082 PLSCR4Q9NRQ2 329 aa15.05■□□□□ -0
SHANK1-202ENST00000359082 ZNF329Q86UD4 541 aa15.04■□□□□ -0
SHANK1-202ENST00000359082 DTX1Q86Y01 620 aa15.04■□□□□ -0
SHANK1-202ENST00000359082 C1orf159Q96HA4 380 aa15.04■□□□□ -0
SHANK1-202ENST00000359082 TRGV9Q99603 122 aa15.04■□□□□ -0
SHANK1-202ENST00000359082 COLCA2A8K830 154 aa15.04■□□□□ -0
SHANK1-202ENST00000359082 PSPNO60542 156 aa15.04■□□□□ -0
SHANK1-202ENST00000359082 C6orf226Q5I0X4 101 aa15.04■□□□□ -0
SHANK1-202ENST00000359082 ZFAND6Q6FIF0 208 aa15.04■□□□□ -0
SHANK1-202ENST00000359082 A0A087X0K7 114 aa15.04■□□□□ -0
SHANK1-202ENST00000359082 TRAV13-1A0A0B4J241 112 aa15.04■□□□□ -0
SHANK1-202ENST00000359082 EFNA2O43921 213 aa15.04■□□□□ -0
SHANK1-202ENST00000359082 CD59P13987 128 aa15.04■□□□□ -0
SHANK1-202ENST00000359082 OCIAD2Q56VL3 154 aa15.04■□□□□ -0
SHANK1-202ENST00000359082 C2orf82Q6UX34 121 aa15.04■□□□□ -0
SHANK1-202ENST00000359082 GAFA1Q96PS6 74 aa15.04■□□□□ -0
SHANK1-202ENST00000359082 RALGAPA2Q2PPJ7 1873 aa15.04■□□□□ -0
SHANK1-202ENST00000359082 BUB1B-PAK6H3BSN5 160 aa15.03■□□□□ -0
SHANK1-202ENST00000359082 LEPROTO15243 131 aa15.03■□□□□ -0
SHANK1-202ENST00000359082 CFHR1Q03591 330 aa15.03■□□□□ -0
SHANK1-202ENST00000359082 SRRM5B3KS81 715 aa15.03■□□□□ -0
SHANK1-202ENST00000359082 TRAV8-3A0A0A6YYJ7 113 aa15.03■□□□□ -0
SHANK1-202ENST00000359082 A0A0G2JNJ9 132 aa15.03■□□□□ -0
SHANK1-202ENST00000359082 AGMATQ9BSE5 352 aa15.03■□□□□ -0
SHANK1-202ENST00000359082 TMEM242Q9NWH2 141 aa15.03■□□□□ -0
SHANK1-202ENST00000359082 Q9UFV3 132 aa15.03■□□□□ -0
SHANK1-202ENST00000359082 VWC2LB2RUY7 222 aa15.03■□□□□ -0
SHANK1-202ENST00000359082 TPRP12270 2363 aaKnown RBP15.03■□□□□ -0
SHANK1-202ENST00000359082 CHD5Q8TDI0 1954 aa15.03■□□□□ -0
SHANK1-202ENST00000359082 DLEU1O43261 78 aa15.02■□□□□ -0
SHANK1-202ENST00000359082 GAGE2BQ13066 116 aa15.02■□□□□ -0
SHANK1-202ENST00000359082 TMEM158Q8WZ71 300 aa15.02■□□□□ -0
SHANK1-202ENST00000359082 MINOS1Q5TGZ0 78 aa15.02■□□□□ -0
SHANK1-202ENST00000359082 SPSB3Q6PJ21 355 aa15.02■□□□□ -0
SHANK1-202ENST00000359082 MINOS1-NBL1R4GNA1 71 aa15.02■□□□□ -0
SHANK1-202ENST00000359082 VCYO14598 125 aa15.02■□□□□ -0
SHANK1-202ENST00000359082 CD5P06127 495 aa15.02□□□□□ -0.01
SHANK1-202ENST00000359082 EDA2RQ9HAV5 297 aa15.02□□□□□ -0.01
SHANK1-202ENST00000359082 TRBV24-1A0A075B6N3 115 aa15.01□□□□□ -0.01
SHANK1-202ENST00000359082 TRAV8-1A0A0A6YYK1 113 aa15.01□□□□□ -0.01
SHANK1-202ENST00000359082 GLRX5Q86SX6 157 aa15.01□□□□□ -0.01
SHANK1-202ENST00000359082 LINC00205P59089 165 aa15.01□□□□□ -0.01
SHANK1-202ENST00000359082 CYTL1Q9NRR1 136 aa15.01□□□□□ -0.01
SHANK1-202ENST00000359082 SPXQ9BT56 116 aa15.01□□□□□ -0.01
SHANK1-202ENST00000359082 TRPM7Q96QT4 1865 aa15.01□□□□□ -0.01
SHANK1-202ENST00000359082 LINC01549A6NIU2 74 aa15.01□□□□□ -0.01
SHANK1-202ENST00000359082 NTN3O00634 580 aaPredicted RBP15.01□□□□□ -0.01
SHANK1-202ENST00000359082 Q0VFX4 171 aa15.01□□□□□ -0.01
SHANK1-202ENST00000359082 LINC00477Q96M19 166 aa15.01□□□□□ -0.01
SHANK1-202ENST00000359082 B4DSR2 109 aa15□□□□□ -0.01
SHANK1-202ENST00000359082 C1orf194Q5T5A4 169 aa15□□□□□ -0.01
SHANK1-202ENST00000359082 C9orf139Q6ZV77 190 aa15□□□□□ -0.01
SHANK1-202ENST00000359082 MCRIP2Q9BUT9 160 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms