RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 STPG4Q8N801 248 aa9.22□□□□□ -0.93
COL11A1-202ENST00000358392 WBP1Q96G27 269 aa9.22□□□□□ -0.93
COL11A1-202ENST00000358392 TIMM21Q9BVV7 248 aa9.22□□□□□ -0.93
COL11A1-202ENST00000358392 TRAV41A0A0B4J266 112 aa9.22□□□□□ -0.93
COL11A1-202ENST00000358392 KIF26BQ2KJY2 2108 aa9.22□□□□□ -0.93
COL11A1-202ENST00000358392 PRIMA1Q86XR5 153 aa9.22□□□□□ -0.93
COL11A1-202ENST00000358392 TRAV3A0A0B4J244 114 aa9.21□□□□□ -0.93
COL11A1-202ENST00000358392 THBDP07204 575 aa9.21□□□□□ -0.93
COL11A1-202ENST00000358392 DUTP33316 252 aaKnown RBP9.21□□□□□ -0.93
COL11A1-202ENST00000358392 TREML4Q6UXN2 200 aa9.21□□□□□ -0.93
COL11A1-202ENST00000358392 A0A1B0GTI1 187 aa9.21□□□□□ -0.93
COL11A1-202ENST00000358392 PRB2P02812 416 aaPredicted RBP9.21□□□□□ -0.93
COL11A1-202ENST00000358392 RPL36AP83881 106 aaKnown RBP9.21□□□□□ -0.93
COL11A1-202ENST00000358392 PRSS57Q6UWY2 283 aa9.21□□□□□ -0.93
COL11A1-202ENST00000358392 RPL36ALQ969Q0 106 aaKnown RBP9.21□□□□□ -0.93
COL11A1-202ENST00000358392 SNHG12Q9BXW3 62 aa9.21□□□□□ -0.93
COL11A1-202ENST00000358392 CHAC1Q9BUX1 264 aa9.21□□□□□ -0.94
COL11A1-202ENST00000358392 C3orf79P0CE67 100 aa9.21□□□□□ -0.94
COL11A1-202ENST00000358392 SELLP14151 372 aa9.21□□□□□ -0.94
COL11A1-202ENST00000358392 DIDO1Q9BTC0 2240 aaKnown RBP9.21□□□□□ -0.94
COL11A1-202ENST00000358392 C1orf194Q5T5A4 169 aa9.21□□□□□ -0.94
COL11A1-202ENST00000358392 C1orf53Q5VUE5 145 aa9.21□□□□□ -0.94
COL11A1-202ENST00000358392 SMPXQ9UHP9 88 aa9.21□□□□□ -0.94
COL11A1-202ENST00000358392 METRNQ9UJH8 293 aa9.21□□□□□ -0.94
COL11A1-202ENST00000358392 UBE2V1Q13404 147 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 AMN1Q8IY45 258 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 DNAJC30Q96LL9 226 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 IGHV3-16A0A0C4DH30 117 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 IGHV1-18A0A0C4DH31 117 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 FGFBP3Q8TAT2 258 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 HEATR1Q9H583 2144 aaKnown RBP9.2□□□□□ -0.94
COL11A1-202ENST00000358392 DOCK11Q5JSL3 2073 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 H3BMM0 161 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 RS1O15537 224 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 UBE2WQ96B02 151 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 NEUROG3Q9Y4Z2 214 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 SYS1-DBNDD2H3BUS1 97 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 BRD3OSQ6XYD6 125 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 NABP1Q96AH0 204 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 STRCP1A6NGW2 1772 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 IGKV1-9A0A0C4DH69 117 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 COLCA2A8K830 154 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 DEFB130BP0DP73 79 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 DEFB130AP0DP74 79 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 LY6DQ14210 128 aa9.2□□□□□ -0.94
COL11A1-202ENST00000358392 EIF4EBP2Q13542 120 aaPredicted RBP9.2□□□□□ -0.94
COL11A1-202ENST00000358392 J3QW42 95 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 PFN2P35080 140 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 LINC00205P59089 165 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 GAGE1Q13065 139 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 RPRMLQ8N4K4 120 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 SPRR3Q9UBC9 169 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 MARF1Q9Y4F3 1742 aaKnown RBP9.19□□□□□ -0.94
COL11A1-202ENST00000358392 IGHV2-26A0A0B4J1V2 119 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 LILRA1O75019 489 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 MORN5Q5VZ52 161 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 FAM90A1Q86YD7 464 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 SEC16AO15027 2179 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 IGLV3-21P80748 117 aaPredicted RBP9.19□□□□□ -0.94
COL11A1-202ENST00000358392 VCYO14598 125 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 SS18Q15532 418 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 TMEM200BQ69YZ2 307 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 TMEM126AQ9H061 195 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 MYMXA0A1B0GTQ4 84 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 CLPSL1A2RUU4 121 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 CD5LO43866 347 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 GLRX5Q86SX6 157 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 ZNF329Q86UD4 541 aa9.19□□□□□ -0.94
COL11A1-202ENST00000358392 AGMATQ9BSE5 352 aa9.18□□□□□ -0.94
COL11A1-202ENST00000358392 NDUFS5O43920 106 aa9.18□□□□□ -0.94
COL11A1-202ENST00000358392 KNCNA6PVL3 124 aa9.18□□□□□ -0.94
COL11A1-202ENST00000358392 ZC2HC1BQ5TFG8 222 aa9.18□□□□□ -0.94
COL11A1-202ENST00000358392 SLC25A48Q6ZT89 311 aaKnown RBP9.18□□□□□ -0.94
COL11A1-202ENST00000358392 MSRB2Q9Y3D2 182 aa9.18□□□□□ -0.94
COL11A1-202ENST00000358392 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.18□□□□□ -0.94
COL11A1-202ENST00000358392 HAMPP81172 84 aa9.18□□□□□ -0.94
COL11A1-202ENST00000358392 PMVKQ15126 192 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 PSME4Q14997 1843 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 CASP8AP2Q9UKL3 1982 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 IGHV1-46P01743 117 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 LINC01551Q86U37 167 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 PINLYPA6NC86 204 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 DKK1O94907 266 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 C5orf47Q569G3 176 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 ZNF664Q8N3J9 261 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 OVOL2Q9BRP0 275 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 KMT2EQ8IZD2 1858 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 A0A1B0GUS0 222 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 FAM231BA6NCW3 169 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 LINC00271P0C7V0 271 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 RASL11AQ6T310 242 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 KLHL30-AS1Q8NEE0 82 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 RNASE6Q93091 150 aaKnown RBP9.17□□□□□ -0.94
COL11A1-202ENST00000358392 C8orf49Q96NF6 230 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 RBBP6Q7Z6E9 1792 aaKnown RBP9.17□□□□□ -0.94
COL11A1-202ENST00000358392 DOCK4Q8N1I0 1966 aa9.17□□□□□ -0.94
COL11A1-202ENST00000358392 CACNA1IQ9P0X4 2223 aa9.16□□□□□ -0.94
COL11A1-202ENST00000358392 SOCS3O14543 225 aa9.16□□□□□ -0.94
COL11A1-202ENST00000358392 PI4KAP42356 2102 aa9.16□□□□□ -0.94
COL11A1-202ENST00000358392 ANXA2RQ3ZCQ2 193 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms