RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 COX5BP10606 129 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 FAM110DQ8TAY7 271 aaPredicted RBP8.72□□□□□ -1.01
FXR1-202ENST00000357559 MGST2Q99735 147 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 RS1O15537 224 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 PRIMA1Q86XR5 153 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 TRAV9-2A0A087WT02 112 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 IGKV1D-13A0A0B4J2D9 117 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.72□□□□□ -1.01
FXR1-202ENST00000357559 KNCNA6PVL3 124 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 TMEM14DPA8MWL7 114 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 IGKV1-13P0DP09 117 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 GUSBP1Q15486 140 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 EFNB3Q15768 340 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 BMPERQ8N8U9 685 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 ZNF525Q8N782 197 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 TET1Q8NFU7 2136 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 C9JAW5 83 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 ZNF138P52744 262 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 PVRIGQ6DKI7 326 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 LYZL1Q6UWQ5 148 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 PIP4P2Q8N4L2 257 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 RASL10AQ92737 203 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 SPATA31B1PQ5VZV4 182 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 VSIRQ9H7M9 311 aa8.72□□□□□ -1.01
FXR1-202ENST00000357559 TRPM3Q9HCF6 1732 aaPredicted RBP8.71□□□□□ -1.01
FXR1-202ENST00000357559 A0A1W2PRE2 83 aa8.71□□□□□ -1.01
FXR1-202ENST00000357559 C10orf55Q5SWW7 151 aa8.71□□□□□ -1.01
FXR1-202ENST00000357559 SPTBN2O15020 2390 aa8.71□□□□□ -1.01
FXR1-202ENST00000357559 SBF1O95248 1867 aa8.71□□□□□ -1.01
FXR1-202ENST00000357559 F2Z2F3 143 aa8.71□□□□□ -1.01
FXR1-202ENST00000357559 H3BUX3 64 aa8.71□□□□□ -1.01
FXR1-202ENST00000357559 SPRR3Q9UBC9 169 aa8.71□□□□□ -1.01
FXR1-202ENST00000357559 GNLYP22749 145 aa8.71□□□□□ -1.02
FXR1-202ENST00000357559 ATRAIDQ6UW56 229 aa8.71□□□□□ -1.02
FXR1-202ENST00000357559 MRPL52Q86TS9 123 aaKnown RBP8.71□□□□□ -1.02
FXR1-202ENST00000357559 DKK1O94907 266 aa8.71□□□□□ -1.02
FXR1-202ENST00000357559 TMEM144Q7Z5S9 345 aa8.71□□□□□ -1.02
FXR1-202ENST00000357559 BRCA1P38398 1863 aaKnown RBP8.71□□□□□ -1.02
FXR1-202ENST00000357559 COL6A6A6NMZ7 2263 aa8.71□□□□□ -1.02
FXR1-202ENST00000357559 NR2C2APQ86WQ0 139 aa8.71□□□□□ -1.02
FXR1-202ENST00000357559 SH2D1AO60880 128 aa8.71□□□□□ -1.02
FXR1-202ENST00000357559 TCF15Q12870 199 aa8.71□□□□□ -1.02
FXR1-202ENST00000357559 PSG3Q16557 428 aa8.71□□□□□ -1.02
FXR1-202ENST00000357559 LY6HO94772 140 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 TPTE2P1Q5T6R2 138 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 DENND4AQ7Z401 1863 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 IQCF6A8MYZ5 107 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 OVOL1O14753 267 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 C18orf12Q96KH6 178 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 TIMM21Q9BVV7 248 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 LINC00587B1AMM8 73 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 TANC2Q9HCD6 1990 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 IGHV4-4A0A075B6R2 117 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 NXPH4O95158 308 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 PMVKQ15126 192 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 CCL20P78556 96 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 FAM166AQ6J272 317 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 RASL11AQ6T310 242 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 ZNF497Q6ZNH5 498 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 GREB1LQ9C091 1923 aaPredicted RBP8.7□□□□□ -1.02
FXR1-202ENST00000357559 ARHGAP21Q5T5U3 1957 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 IGHV2-26A0A0B4J1V2 119 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 SEC11AP67812 179 aa8.7□□□□□ -1.02
FXR1-202ENST00000357559 IGHV1-18A0A0C4DH31 117 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 IGHV3-38A0A0C4DH36 116 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 TCTEX1D4Q5JR98 221 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 DTX1Q86Y01 620 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 LRP5O75197 1615 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 SBF2Q86WG5 1849 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 PQLC2LA1A4F0 135 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 HSD52Q0P140 79 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 FOXF2Q12947 444 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 HAMPP81172 84 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 C22orf46C9J442 243 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 SELLP14151 372 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 TMEM158Q8WZ71 300 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 DNAJC30Q96LL9 226 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 SPINK8P0C7L1 97 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 TIMP3P35625 211 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 C9orf153Q5TBE3 101 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 CHCHD1Q96BP2 118 aaKnown RBP8.69□□□□□ -1.02
FXR1-202ENST00000357559 KLK9Q9UKQ9 250 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 RALGAPA2Q2PPJ7 1873 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 MBD3L4A6NDZ8 208 aaPredicted RBP8.69□□□□□ -1.02
FXR1-202ENST00000357559 MBD3L3A6NE82 208 aaPredicted RBP8.69□□□□□ -1.02
FXR1-202ENST00000357559 MBD3L5A6NJ08 208 aaPredicted RBP8.69□□□□□ -1.02
FXR1-202ENST00000357559 MBD3L2Q8NHZ7 208 aaPredicted RBP8.69□□□□□ -1.02
FXR1-202ENST00000357559 TMEM170AQ8WVE7 144 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 XCL2Q9UBD3 114 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.69□□□□□ -1.02
FXR1-202ENST00000357559 IFITM2Q01629 132 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 TMEM200BQ69YZ2 307 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 LCN12Q6JVE5 192 aa8.69□□□□□ -1.02
FXR1-202ENST00000357559 PSG1P11464 419 aa8.68□□□□□ -1.02
FXR1-202ENST00000357559 C1QTNF5Q9BXJ0 243 aa8.68□□□□□ -1.02
FXR1-202ENST00000357559 GAGE12JA6NER3 117 aa8.68□□□□□ -1.02
FXR1-202ENST00000357559 GAGE1Q13065 139 aa8.68□□□□□ -1.02
FXR1-202ENST00000357559 GAGE4Q13068 117 aa8.68□□□□□ -1.02
FXR1-202ENST00000357559 GAGE5Q13069 117 aa8.68□□□□□ -1.02
FXR1-202ENST00000357559 MARF1Q9Y4F3 1742 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms