RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 SELENOKQ9Y6D0 94 aa5.41□□□□□ -1.54
TRIM38-201ENST00000357085 K7EN84 100 aa5.41□□□□□ -1.54
TRIM38-201ENST00000357085 CDX4O14627 284 aaPredicted RBP5.41□□□□□ -1.54
TRIM38-201ENST00000357085 DSCAML1Q8TD84 2053 aa5.41□□□□□ -1.54
TRIM38-201ENST00000357085 PRSS46E5RG02 174 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 LINC01619G3V211 115 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 C3orf36Q3SXR2 165 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 MBNL2Q5VZF2 373 aaKnown RBP5.4□□□□□ -1.54
TRIM38-201ENST00000357085 Q6ZT83 130 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 CYYR1Q96J86 154 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 CELA3AP09093 270 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 COX6A1P12074 109 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 CRISPLD2Q9H0B8 497 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 A0A0G2JRQ6 117 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 LEPP41159 167 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 MRPL23Q16540 153 aaKnown RBP5.4□□□□□ -1.54
TRIM38-201ENST00000357085 SYT8Q8NBV8 401 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 SPATA25Q9BR10 227 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 RAXQ9Y2V3 346 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 IGKV1-12A0A0C4DH73 117 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 IGKV1D-12P01611 117 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 CCL3P10147 92 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 TUSC5Q8IXB3 177 aa5.4□□□□□ -1.54
TRIM38-201ENST00000357085 TRAV17A0A0B4J275 112 aa5.4□□□□□ -1.55
TRIM38-201ENST00000357085 SSBP2P81877 361 aaPredicted RBP5.4□□□□□ -1.55
TRIM38-201ENST00000357085 ATXN8Q156A1 80 aa5.4□□□□□ -1.55
TRIM38-201ENST00000357085 ETDBQ3ZM63 59 aa5.4□□□□□ -1.55
TRIM38-201ENST00000357085 Q6ZRM9 215 aa5.4□□□□□ -1.55
TRIM38-201ENST00000357085 PGPA6NDG6 321 aa5.4□□□□□ -1.55
TRIM38-201ENST00000357085 M0R3E3 92 aa5.4□□□□□ -1.55
TRIM38-201ENST00000357085 PRNTQ86SH4 94 aa5.4□□□□□ -1.55
TRIM38-201ENST00000357085 SPACA3Q8IXA5 215 aa5.4□□□□□ -1.55
TRIM38-201ENST00000357085 COL6A6A6NMZ7 2263 aa5.4□□□□□ -1.55
TRIM38-201ENST00000357085 CDCP2Q5VXM1 449 aa5.4□□□□□ -1.55
TRIM38-201ENST00000357085 RFESDQ8TAC1 157 aa5.4□□□□□ -1.55
TRIM38-201ENST00000357085 GAGE12JA6NER3 117 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 GAGE7O76087 117 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 GAGE12FP0CL80 117 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 GAGE12GP0CL81 117 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 GAGE12IP0CL82 117 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 RPL27AP46776 148 aaKnown RBP5.39□□□□□ -1.55
TRIM38-201ENST00000357085 GAGE4Q13068 117 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 C3AR1Q16581 482 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 MOGAT3Q86VF5 341 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 UBALD2Q8IYN6 164 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 TMEM95Q3KNT9 176 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 TMEM78Q5T7P6 136 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 MDP1Q86V88 176 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 ZCCHC24Q8N2G6 241 aaKnown RBP5.39□□□□□ -1.55
TRIM38-201ENST00000357085 RAX2Q96IS3 184 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 COLQQ9Y215 455 aaPredicted RBP5.39□□□□□ -1.55
TRIM38-201ENST00000357085 SAA2P0DJI9 122 aaPredicted RBP5.39□□□□□ -1.55
TRIM38-201ENST00000357085 TEN1Q86WV5 123 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 PIFOQ8TCI5 191 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 CT55Q8WUE5 264 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 IGF2BP2-AS1Q96M15 143 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 GHRHP01286 108 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 RBP4P02753 201 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 PCOLCEQ15113 449 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 Q6P435 159 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 BADQ92934 168 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 ZNF581Q9P0T4 197 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 IGHV3-7P01780 117 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 CITED1Q99966 193 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 SRXN1Q9BYN0 137 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 UFC1Q9Y3C8 167 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 TSPAN13O95857 204 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 HLA-DMBP28068 263 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 TMEM240Q5SV17 173 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 IFITM1P13164 125 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 CCL2P13500 99 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 ZNF493Q6ZR52 646 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 TEX45Q8NA69 505 aa5.39□□□□□ -1.55
TRIM38-201ENST00000357085 FCN3O75636 299 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 S100A4P26447 101 aaKnown RBP5.38□□□□□ -1.55
TRIM38-201ENST00000357085 EBLN2Q6P2I7 272 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 C16orf47Q6ZP98 133 aaPredicted RBP5.38□□□□□ -1.55
TRIM38-201ENST00000357085 MED13Q9UHV7 2174 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 NOTCH3Q9UM47 2321 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 TRAV8-2A0A0B4J237 113 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 EMP1P54849 157 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 SRSF12Q8WXF0 261 aaKnown RBP5.38□□□□□ -1.55
TRIM38-201ENST00000357085 SRRM5B3KS81 715 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 TNFAIP6P98066 277 aaPredicted RBP5.38□□□□□ -1.55
TRIM38-201ENST00000357085 THAP8Q8NA92 274 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 TMEM141Q96I45 108 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 TRGV5A0A0B4J1U4 118 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 TRAV8-4A0A0B4J246 113 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 GATA2P23769 480 aaPredicted RBP5.38□□□□□ -1.55
TRIM38-201ENST00000357085 ID1P41134 155 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 PRSS57Q6UWY2 283 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 ERG28Q9UKR5 140 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 IGKV1-6A0A0C4DH72 117 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 RRN3P1Q2M238 152 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 FOXC2Q99958 501 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 TP53TG3Q9ULZ0 132 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 C5orf64Q2M2E5 130 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 GOLT1AQ6ZVE7 132 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 ABHD12Q8N2K0 398 aa5.38□□□□□ -1.55
TRIM38-201ENST00000357085 IMMP1LQ96LU5 166 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms