RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 C10orf55Q5SWW7 151 aa10.28□□□□□ -0.76
BDNF-202ENST00000356660 EBLN2Q6P2I7 272 aa10.28□□□□□ -0.76
BDNF-202ENST00000356660 ZNRD1Q9P1U0 126 aa10.28□□□□□ -0.76
BDNF-202ENST00000356660 VDAC2P45880 294 aaPredicted RBP10.28□□□□□ -0.76
BDNF-202ENST00000356660 RPL27AP46776 148 aaKnown RBP10.28□□□□□ -0.76
BDNF-202ENST00000356660 ECSCRQ19T08 205 aa10.28□□□□□ -0.76
BDNF-202ENST00000356660 Q6ZR03 302 aa10.28□□□□□ -0.76
BDNF-202ENST00000356660 ABHD17AQ96GS6 310 aa10.28□□□□□ -0.76
BDNF-202ENST00000356660 SPRR3Q9UBC9 169 aa10.28□□□□□ -0.76
BDNF-202ENST00000356660 APOHP02749 345 aaPredicted RBP10.27□□□□□ -0.76
BDNF-202ENST00000356660 NBEAP1P0C6P0 100 aa10.27□□□□□ -0.76
BDNF-202ENST00000356660 CD59P13987 128 aa10.27□□□□□ -0.76
BDNF-202ENST00000356660 SP5Q6BEB4 398 aaPredicted RBP10.27□□□□□ -0.76
BDNF-202ENST00000356660 GOLT1AQ6ZVE7 132 aa10.27□□□□□ -0.76
BDNF-202ENST00000356660 KMT2EQ8IZD2 1858 aa10.27□□□□□ -0.76
BDNF-202ENST00000356660 KIAA1549Q9HCM3 1950 aa10.27□□□□□ -0.77
BDNF-202ENST00000356660 DLL1O00548 723 aa10.27□□□□□ -0.77
BDNF-202ENST00000356660 SLC25A33Q9BSK2 321 aa10.27□□□□□ -0.77
BDNF-202ENST00000356660 FABP2P12104 132 aa10.27□□□□□ -0.77
BDNF-202ENST00000356660 LINC00310P59036 64 aa10.27□□□□□ -0.77
BDNF-202ENST00000356660 ERVK11-1P61568 191 aa10.27□□□□□ -0.77
BDNF-202ENST00000356660 KRTAP27-1Q3LI81 207 aa10.27□□□□□ -0.77
BDNF-202ENST00000356660 LY96Q9Y6Y9 160 aa10.27□□□□□ -0.77
BDNF-202ENST00000356660 FRYLO94915 3013 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 ATG2AQ2TAZ0 1938 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 HCFC1P51610 2035 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 CCL3L1P16619 93 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 GCSHP23434 173 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 PLSCR4Q9NRQ2 329 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 IGHV2-26A0A0B4J1V2 119 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 SYS1-DBNDD2H3BUS1 97 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 PRSS1P07477 247 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 GLRXP35754 106 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 FXYD7P58549 80 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 VWC2Q2TAL6 325 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 ASCL2Q99929 193 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 RPP21Q9H633 154 aaKnown RBP10.26□□□□□ -0.77
BDNF-202ENST00000356660 IDI2-AS1Q9NZ38 188 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 PTPRSQ13332 1948 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 IGHV3OR16-13A0A075B7E8 117 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 IGHV3-74A0A0B4J1X5 117 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 BRWD1-AS2P59051 145 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 PSG9Q00887 426 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 RIGQ13278 110 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 FER1L6-AS1Q8NA97 138 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 GUCD1Q96NT3 240 aa10.26□□□□□ -0.77
BDNF-202ENST00000356660 MRPL27Q9P0M9 148 aaKnown RBP10.26□□□□□ -0.77
BDNF-202ENST00000356660 IGHV3OR16-8A0A075B7F1 116 aa10.25□□□□□ -0.77
BDNF-202ENST00000356660 SAA1P0DJI8 122 aaPredicted RBP10.25□□□□□ -0.77
BDNF-202ENST00000356660 SRSF8Q9BRL6 282 aaKnown RBP10.25□□□□□ -0.77
BDNF-202ENST00000356660 ST20Q9HBF5 79 aa10.25□□□□□ -0.77
BDNF-202ENST00000356660 TRAV8-1A0A0A6YYK1 113 aa10.25□□□□□ -0.77
BDNF-202ENST00000356660 CGB1A6NKQ9 187 aa10.25□□□□□ -0.77
BDNF-202ENST00000356660 LYNX1G3V0Z9 82 aa10.25□□□□□ -0.77
BDNF-202ENST00000356660 IGKV1-16P04430 117 aa10.25□□□□□ -0.77
BDNF-202ENST00000356660 LYNX1P0DP58 116 aa10.25□□□□□ -0.77
BDNF-202ENST00000356660 ZNF134P52741 427 aa10.25□□□□□ -0.77
BDNF-202ENST00000356660 LINC00173Q6ZV60 143 aa10.25□□□□□ -0.77
BDNF-202ENST00000356660 GPR82Q96P67 336 aa10.25□□□□□ -0.77
BDNF-202ENST00000356660 C19orf24Q9BVV8 132 aa10.25□□□□□ -0.77
BDNF-202ENST00000356660 MRPL32Q9BYC8 188 aaKnown RBP10.25□□□□□ -0.77
BDNF-202ENST00000356660 TOMM40O96008 361 aa10.25□□□□□ -0.77
BDNF-202ENST00000356660 CD69Q07108 199 aa10.25□□□□□ -0.77
BDNF-202ENST00000356660 KIR3DL3Q8N743 410 aa10.25□□□□□ -0.77
BDNF-202ENST00000356660 LY6G6EA0A0G2JKS1 128 aa10.24□□□□□ -0.77
BDNF-202ENST00000356660 ORM1P02763 201 aa10.24□□□□□ -0.77
BDNF-202ENST00000356660 ZNF883P0CG24 379 aa10.24□□□□□ -0.77
BDNF-202ENST00000356660 HTN1P15515 57 aa10.24□□□□□ -0.77
BDNF-202ENST00000356660 C11orf52Q96A22 123 aa10.24□□□□□ -0.77
BDNF-202ENST00000356660 C18orf15Q96N68 181 aa10.24□□□□□ -0.77
BDNF-202ENST00000356660 GP6Q9HCN6 339 aa10.24□□□□□ -0.77
BDNF-202ENST00000356660 U3KQA8 63 aa10.24□□□□□ -0.77
BDNF-202ENST00000356660 DYSFO75923 2080 aa10.24□□□□□ -0.77
BDNF-202ENST00000356660 TTC32Q5I0X7 151 aa10.24□□□□□ -0.77
BDNF-202ENST00000356660 LSM4Q9Y4Z0 139 aaKnown RBP10.24□□□□□ -0.77
BDNF-202ENST00000356660 UPK2O00526 184 aa10.24□□□□□ -0.77
BDNF-202ENST00000356660 C5orf17Q8NAS9 161 aa10.24□□□□□ -0.77
BDNF-202ENST00000356660 OR10AG1Q8NH19 301 aa10.24□□□□□ -0.77
BDNF-202ENST00000356660 TRANK1O15050 2925 aa10.24□□□□□ -0.77
BDNF-202ENST00000356660 IGLC7A0M8Q6 106 aa10.23□□□□□ -0.77
BDNF-202ENST00000356660 TIMM23BQ5SRD1 257 aa10.23□□□□□ -0.77
BDNF-202ENST00000356660 EPDR1Q9UM22 224 aa10.23□□□□□ -0.77
BDNF-202ENST00000356660 CD40P25942 277 aa10.23□□□□□ -0.77
BDNF-202ENST00000356660 SPCS1Q9Y6A9 102 aa10.23□□□□□ -0.77
BDNF-202ENST00000356660 IGHV3OR16-10A0A075B7F0 116 aa10.23□□□□□ -0.77
BDNF-202ENST00000356660 F2RL2O00254 374 aa10.23□□□□□ -0.77
BDNF-202ENST00000356660 PRCDQ00LT1 54 aa10.23□□□□□ -0.77
BDNF-202ENST00000356660 GCSAMQ8N6F7 178 aa10.23□□□□□ -0.77
BDNF-202ENST00000356660 UFC1Q9Y3C8 167 aa10.23□□□□□ -0.77
BDNF-202ENST00000356660 TANC2Q9HCD6 1990 aa10.23□□□□□ -0.77
BDNF-202ENST00000356660 TECTAO75443 2155 aa10.23□□□□□ -0.77
BDNF-202ENST00000356660 KBTBD11-OT1A0A1B0GTJ5 212 aa10.23□□□□□ -0.77
BDNF-202ENST00000356660 LGALS7P47929 136 aa10.23□□□□□ -0.77
BDNF-202ENST00000356660 RBPMS2Q6ZRY4 209 aaKnown RBP10.23□□□□□ -0.77
BDNF-202ENST00000356660 MRPL20Q9BYC9 149 aaKnown RBP10.23□□□□□ -0.77
BDNF-202ENST00000356660 NAV3Q8IVL0 2385 aa10.22□□□□□ -0.77
BDNF-202ENST00000356660 JMJD1CQ15652 2540 aa10.22□□□□□ -0.77
BDNF-202ENST00000356660 ZFYVE26Q68DK2 2539 aa10.22□□□□□ -0.77
BDNF-202ENST00000356660 IGKV1D-17A0A075B6S4 117 aa10.22□□□□□ -0.77
BDNF-202ENST00000356660 RNFT1Q5M7Z0 435 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms