RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 TENM2Q9NT68 2774 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 NOTCH3Q9UM47 2321 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 DNAH7Q8WXX0 4024 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 LCE6AA0A183 80 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 H3BUA1 57 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 I3L521 148 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 CNIH1O95406 144 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 HSPB1P04792 205 aaKnown RBP5.4□□□□□ -1.54
VPS13A-201ENST00000355766 S100A7P31151 101 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 PSMB3P49720 205 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 DLX1P56177 255 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 B2MP61769 119 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 CX3CL1P78423 397 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 GAMTQ14353 236 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 FXYD3Q14802 87 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 KHDC3LQ587J8 217 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 FAM209BQ5JX69 171 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 C10orf55Q5SWW7 151 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 C10orf91Q5T1B1 145 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 S100A7AQ86SG5 101 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 DYNAPQ8N1N2 210 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 Q8N9W7 124 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 WFDC9Q8NEX5 89 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 OR2T6Q8NHC8 308 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 GATAD1Q8WUU5 269 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 PFDN5Q99471 154 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 TRGV9Q99603 122 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 MGST2Q99735 147 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 RASL11BQ9BPW5 248 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 RSG1Q9BU20 258 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 SEC11CQ9BY50 192 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 MRPL32Q9BYC8 188 aaKnown RBP5.4□□□□□ -1.54
VPS13A-201ENST00000355766 HRH4Q9H3N8 390 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 MANBALQ9NQG1 85 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 SLC45A2Q9UMX9 530 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 CARHSP1Q9Y2V2 147 aaKnown RBP5.4□□□□□ -1.54
VPS13A-201ENST00000355766 PXMP4Q9Y6I8 212 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 U3KQK5 164 aa5.4□□□□□ -1.54
VPS13A-201ENST00000355766 STAB2Q8WWQ8 2551 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 IGLV11-55A0A075B6I3 123 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 TRAV30A0A087WSZ9 112 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 IGHV7-81A0A0B4J1V7 117 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 TCRBV4S1A1TA0A5B7 111 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 TMEM218A2RU14 115 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 SMCO3A2RU48 225 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 MAP1LC3B2A6NCE7 125 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 AGPAT2O15120 278 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 AMY1AP04745 511 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 IGF1P05019 195 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 BCL2P10415 239 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 CD28P10747 220 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 CNTFRP26992 372 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 CDC34P49427 236 aaPredicted RBP5.39□□□□□ -1.55
VPS13A-201ENST00000355766 TAS2R45P59539 299 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 PLP1P60201 277 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 RHOBP62745 196 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 EGFEM1PQ0D2K5 195 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 AKIRIN2Q53H80 203 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 ZNF506Q5JVG8 444 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 FFAR4Q5NUL3 377 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 CASC10Q5T4H9 136 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 ACSM6Q6P461 480 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 SPSB3Q6PJ21 355 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 CCDC28AQ8IWP9 274 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 RPP25LQ8N5L8 163 aaKnown RBP5.39□□□□□ -1.55
VPS13A-201ENST00000355766 C5orf56Q8N8D9 126 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 STXBP6Q8NFX7 210 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 OR10W1Q8NGF6 305 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 OR10G9Q8NGN4 311 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 OR10G7Q8NGN6 311 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 OR4X1Q8NH49 305 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 VN1R17PQ8TDU5 208 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 SFT2D1Q8WV19 159 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 TXN2Q99757 166 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 TCEAL7Q9BRU2 100 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 MAP1LC3BQ9GZQ8 125 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 SLC39A9Q9NUM3 307 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 HERC2O95714 4834 aa5.39□□□□□ -1.55
VPS13A-201ENST00000355766 A6NDX4 124 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 NCBP2LA6PVI3 153 aaKnown RBP5.38□□□□□ -1.55
VPS13A-201ENST00000355766 E7EUB6 86 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 TMEM250H0YL14 139 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 I3L2K1 104 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 CXorf1O96002 111 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 OR5G3P0C626 314 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 NHLRC4P0CG21 123 aaPredicted RBP5.38□□□□□ -1.55
VPS13A-201ENST00000355766 STAG3L2P0CL84 134 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 STAG3L3P0CL85 134 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 DEFA4P12838 97 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 MYOD1P15172 320 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 AREGP15514 252 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 NPBWR1P48145 328 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 FHITP49789 147 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 GNB1P62873 340 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 HNF4GQ14541 408 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 GUK1Q16774 197 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 PQLC2Q6ZP29 291 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 SVBPQ8N300 66 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 OR1L4Q8NGR5 311 aa5.38□□□□□ -1.55
VPS13A-201ENST00000355766 MUC7Q8TAX7 377 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms