RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 SMDT1Q9H4I9 107 aa10.57□□□□□ -0.72
HOXA1-202ENST00000355633 GNB4Q9HAV0 340 aa10.57□□□□□ -0.72
HOXA1-202ENST00000355633 MANBALQ9NQG1 85 aa10.57□□□□□ -0.72
HOXA1-202ENST00000355633 TRAV5A0A0B4J249 113 aa10.56□□□□□ -0.72
HOXA1-202ENST00000355633 C9JQL5 133 aa10.56□□□□□ -0.72
HOXA1-202ENST00000355633 INAFM1C9JVW0 142 aa10.56□□□□□ -0.72
HOXA1-202ENST00000355633 OR7C2O60412 319 aa10.56□□□□□ -0.72
HOXA1-202ENST00000355633 RNASE1P07998 156 aaKnown RBP10.56□□□□□ -0.72
HOXA1-202ENST00000355633 HILS1P60008 231 aa10.56□□□□□ -0.72
HOXA1-202ENST00000355633 ICAM4Q14773 271 aa10.56□□□□□ -0.72
HOXA1-202ENST00000355633 FAM209BQ5JX69 171 aa10.56□□□□□ -0.72
HOXA1-202ENST00000355633 TEX38Q6PEX7 206 aa10.56□□□□□ -0.72
HOXA1-202ENST00000355633 C10orf99Q6UWK7 81 aa10.56□□□□□ -0.72
HOXA1-202ENST00000355633 RXFP4Q8TDU9 374 aa10.56□□□□□ -0.72
HOXA1-202ENST00000355633 SLC25A2Q9BXI2 301 aa10.56□□□□□ -0.72
HOXA1-202ENST00000355633 SERTAD4Q9NUC0 356 aa10.56□□□□□ -0.72
HOXA1-202ENST00000355633 MRPL27Q9P0M9 148 aaKnown RBP10.56□□□□□ -0.72
HOXA1-202ENST00000355633 VAX2Q9UIW0 290 aa10.56□□□□□ -0.72
HOXA1-202ENST00000355633 PUS1Q9Y606 427 aaKnown RBP eCLIP10.56□□□□□ -0.72
HOXA1-202ENST00000355633 ANK3Q12955 4377 aaKnown RBP10.56□□□□□ -0.72
HOXA1-202ENST00000355633 HIVEP2P31629 2446 aa10.55□□□□□ -0.72
HOXA1-202ENST00000355633 IGHV3-11P01762 117 aa10.55□□□□□ -0.72
HOXA1-202ENST00000355633 CRYBA1P05813 215 aa10.55□□□□□ -0.72
HOXA1-202ENST00000355633 TAGLN2P37802 199 aaKnown RBP10.55□□□□□ -0.72
HOXA1-202ENST00000355633 Q6ZSV7 163 aa10.55□□□□□ -0.72
HOXA1-202ENST00000355633 OR5AU1Q8NGC0 362 aa10.55□□□□□ -0.72
HOXA1-202ENST00000355633 FAM167A-AS1Q96KT0 104 aa10.55□□□□□ -0.72
HOXA1-202ENST00000355633 IGHV3-35A0A0C4DH35 117 aa10.55□□□□□ -0.72
HOXA1-202ENST00000355633 RPL15P61313 204 aaKnown RBP10.55□□□□□ -0.72
HOXA1-202ENST00000355633 USF2Q15853 346 aaPredicted RBP10.55□□□□□ -0.72
HOXA1-202ENST00000355633 ZNF503Q96F45 646 aa10.55□□□□□ -0.72
HOXA1-202ENST00000355633 SLC25A39Q9BZJ4 359 aaPredicted RBP10.55□□□□□ -0.72
HOXA1-202ENST00000355633 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.54□□□□□ -0.72
HOXA1-202ENST00000355633 PPP5D1E7EU14 171 aa10.54□□□□□ -0.72
HOXA1-202ENST00000355633 F8W036 122 aa10.54□□□□□ -0.72
HOXA1-202ENST00000355633 PAGE4O60829 102 aa10.54□□□□□ -0.72
HOXA1-202ENST00000355633 SNAPINO95295 136 aa10.54□□□□□ -0.72
HOXA1-202ENST00000355633 HSPB1P04792 205 aaKnown RBP10.54□□□□□ -0.72
HOXA1-202ENST00000355633 ELANEP08246 267 aa10.54□□□□□ -0.72
HOXA1-202ENST00000355633 SFTA3P0C7M3 94 aa10.54□□□□□ -0.72
HOXA1-202ENST00000355633 ARL3P36405 182 aa10.54□□□□□ -0.72
HOXA1-202ENST00000355633 RELQ04864 619 aaPredicted RBP10.54□□□□□ -0.72
HOXA1-202ENST00000355633 FOXE3Q13461 319 aa10.54□□□□□ -0.72
HOXA1-202ENST00000355633 ZNF343Q6P1L6 599 aa10.54□□□□□ -0.72
HOXA1-202ENST00000355633 S100A7AQ86SG5 101 aa10.54□□□□□ -0.72
HOXA1-202ENST00000355633 OR4X2Q8NGF9 303 aa10.54□□□□□ -0.72
HOXA1-202ENST00000355633 JMJD8Q96S16 334 aa10.54□□□□□ -0.72
HOXA1-202ENST00000355633 C12orf57Q99622 126 aa10.54□□□□□ -0.72
HOXA1-202ENST00000355633 TMEM167BQ9NRX6 74 aa10.54□□□□□ -0.72
HOXA1-202ENST00000355633 UBE2G2P60604 165 aa10.53□□□□□ -0.72
HOXA1-202ENST00000355633 ZNF414Q96IQ9 312 aa10.53□□□□□ -0.72
HOXA1-202ENST00000355633 PAXXQ9BUH6 204 aa10.53□□□□□ -0.72
HOXA1-202ENST00000355633 SLC35B3Q9H1N7 401 aa10.53□□□□□ -0.72
HOXA1-202ENST00000355633 OR51M1Q9H341 326 aa10.53□□□□□ -0.72
HOXA1-202ENST00000355633 H3BRN7 92 aa10.53□□□□□ -0.72
HOXA1-202ENST00000355633 BMPR1BO00238 502 aa10.53□□□□□ -0.72
HOXA1-202ENST00000355633 GATCO43716 136 aaKnown RBP10.53□□□□□ -0.72
HOXA1-202ENST00000355633 TRBV12-3P01733 135 aa10.53□□□□□ -0.72
HOXA1-202ENST00000355633 SRP19P09132 144 aaKnown RBP10.53□□□□□ -0.72
HOXA1-202ENST00000355633 OR10J4P0C629 311 aa10.53□□□□□ -0.72
HOXA1-202ENST00000355633 UBE2L3P68036 154 aaKnown RBP10.53□□□□□ -0.72
HOXA1-202ENST00000355633 MEF2BQ02080 365 aaPredicted RBP10.53□□□□□ -0.72
HOXA1-202ENST00000355633 LEMD1Q68G75 181 aa10.53□□□□□ -0.72
HOXA1-202ENST00000355633 TOMM20LQ6UXN7 152 aa10.53□□□□□ -0.72
HOXA1-202ENST00000355633 STXBP6Q8NFX7 210 aa10.53□□□□□ -0.72
HOXA1-202ENST00000355633 SHANK2-AS3Q9BTD1 123 aa10.53□□□□□ -0.72
HOXA1-202ENST00000355633 RPLP1P05386 114 aaKnown RBP10.52□□□□□ -0.73
HOXA1-202ENST00000355633 PYYP10082 97 aa10.52□□□□□ -0.73
HOXA1-202ENST00000355633 ADCYAP1P18509 176 aa10.52□□□□□ -0.73
HOXA1-202ENST00000355633 BTN1A1Q13410 526 aa10.52□□□□□ -0.73
HOXA1-202ENST00000355633 KIAA0141Q14154 515 aaPredicted RBP10.52□□□□□ -0.73
HOXA1-202ENST00000355633 ZFAND3Q9H8U3 227 aa10.52□□□□□ -0.73
HOXA1-202ENST00000355633 RABAC1Q9UI14 185 aa10.52□□□□□ -0.73
HOXA1-202ENST00000355633 CST9LP1Q5W188 147 aa10.51□□□□□ -0.73
HOXA1-202ENST00000355633 KLHDC1Q8N7A1 406 aa10.51□□□□□ -0.73
HOXA1-202ENST00000355633 SEC11CQ9BY50 192 aa10.51□□□□□ -0.73
HOXA1-202ENST00000355633 IGHV3OR16-8A0A075B7F1 116 aa10.51□□□□□ -0.73
HOXA1-202ENST00000355633 C11orf94C9JXX5 98 aa10.51□□□□□ -0.73
HOXA1-202ENST00000355633 CD81P60033 236 aa10.51□□□□□ -0.73
HOXA1-202ENST00000355633 RNF152Q8N8N0 203 aa10.51□□□□□ -0.73
HOXA1-202ENST00000355633 MYOZ3Q8TDC0 251 aa10.51□□□□□ -0.73
HOXA1-202ENST00000355633 OR5B12Q96R08 314 aa10.51□□□□□ -0.73
HOXA1-202ENST00000355633 FAM74A7A6NL05 159 aa10.5□□□□□ -0.73
HOXA1-202ENST00000355633 APOC3P02656 99 aa10.5□□□□□ -0.73
HOXA1-202ENST00000355633 S100A7P31151 101 aa10.5□□□□□ -0.73
HOXA1-202ENST00000355633 ATP5G3P48201 142 aa10.5□□□□□ -0.73
HOXA1-202ENST00000355633 CEBPGP53567 150 aa10.5□□□□□ -0.73
HOXA1-202ENST00000355633 CYB561D1Q8N8Q1 229 aa10.5□□□□□ -0.73
HOXA1-202ENST00000355633 OR4F5Q8NH21 305 aa10.5□□□□□ -0.73
HOXA1-202ENST00000355633 OR4F4Q96R69 305 aa10.5□□□□□ -0.73
HOXA1-202ENST00000355633 SAV1Q9H4B6 383 aaPredicted RBP10.5□□□□□ -0.73
HOXA1-202ENST00000355633 PEF1Q9UBV8 284 aaKnown RBP10.5□□□□□ -0.73
HOXA1-202ENST00000355633 YTHDF2Q9Y5A9 579 aaKnown RBP10.5□□□□□ -0.73
HOXA1-202ENST00000355633 ARL2-SNX15V9GYD0 113 aa10.5□□□□□ -0.73
HOXA1-202ENST00000355633 GGCTO75223 188 aaKnown RBP10.5□□□□□ -0.73
HOXA1-202ENST00000355633 GP9P14770 177 aa10.5□□□□□ -0.73
HOXA1-202ENST00000355633 C10orf91Q5T1B1 145 aa10.5□□□□□ -0.73
HOXA1-202ENST00000355633 CLRN3Q8NCR9 226 aa10.5□□□□□ -0.73
HOXA1-202ENST00000355633 FXYD5Q96DB9 178 aa10.5□□□□□ -0.73
HOXA1-202ENST00000355633 UBE2E2Q96LR5 201 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms