RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 UBE2WQ96B02 151 aa10.44□□□□□ -0.74
SYNCRIP-201ENST00000355238 MCRIP2Q9BUT9 160 aaKnown RBP10.44□□□□□ -0.74
SYNCRIP-201ENST00000355238 TMEM8BA6NDV4 472 aa10.44□□□□□ -0.74
SYNCRIP-201ENST00000355238 LHFPL4Q7Z7J7 247 aa10.44□□□□□ -0.74
SYNCRIP-201ENST00000355238 TMEM167AQ8TBQ9 72 aa10.44□□□□□ -0.74
SYNCRIP-201ENST00000355238 PATJQ8NI35 1801 aa10.44□□□□□ -0.74
SYNCRIP-201ENST00000355238 PLAURQ03405 335 aa10.44□□□□□ -0.74
SYNCRIP-201ENST00000355238 UCNP55089 124 aa10.44□□□□□ -0.74
SYNCRIP-201ENST00000355238 NEU4Q8WWR8 484 aaPredicted RBP10.44□□□□□ -0.74
SYNCRIP-201ENST00000355238 MBNL3Q9NUK0 354 aaKnown RBP10.44□□□□□ -0.74
SYNCRIP-201ENST00000355238 A0A0G2JRQ6 117 aa10.44□□□□□ -0.74
SYNCRIP-201ENST00000355238 A0A1W2PPM0 123 aa10.44□□□□□ -0.74
SYNCRIP-201ENST00000355238 IGLL1P15814 213 aa10.44□□□□□ -0.74
SYNCRIP-201ENST00000355238 ASXL3Q9C0F0 2248 aa10.44□□□□□ -0.74
SYNCRIP-201ENST00000355238 TRAV8-3A0A0A6YYJ7 113 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 IFITM1P13164 125 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 MRPL14Q6P1L8 145 aaKnown RBP10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 AMN1Q8IY45 258 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 DNAJC30Q96LL9 226 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 LSM4Q9Y4Z0 139 aaKnown RBP10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 PRR31Q5SQ13 230 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 GLMPQ8WWB7 406 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 ANAPC10Q9UM13 185 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 ETDBQ3ZM63 59 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 NEGR1Q7Z3B1 354 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 Q86TA4 180 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 LOC102723996A0A087X1L8 192 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 MALP21145 153 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 LINC00158P58513 81 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 GATD1Q8NB37 220 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 SPANXCQ9NY87 97 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 SNRNP200O75643 2136 aaKnown RBP10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 IGHV1-24A0A0C4DH33 117 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 FGFBP3Q8TAT2 258 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 ITLN2Q8WWU7 325 aaPredicted RBP10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 RASL10AQ92737 203 aa10.43□□□□□ -0.74
SYNCRIP-201ENST00000355238 BVES-AS1Q5T3Y7 98 aa10.42□□□□□ -0.74
SYNCRIP-201ENST00000355238 SIGLEC15Q6ZMC9 328 aa10.42□□□□□ -0.74
SYNCRIP-201ENST00000355238 A0A0U1RRA0 63 aa10.42□□□□□ -0.74
SYNCRIP-201ENST00000355238 Q6ZRM9 215 aa10.42□□□□□ -0.74
SYNCRIP-201ENST00000355238 PSME4Q14997 1843 aa10.42□□□□□ -0.74
SYNCRIP-201ENST00000355238 PARP14Q460N5 1801 aa10.42□□□□□ -0.74
SYNCRIP-201ENST00000355238 RALGAPA2Q2PPJ7 1873 aa10.42□□□□□ -0.74
SYNCRIP-201ENST00000355238 AZU1P20160 251 aa10.42□□□□□ -0.74
SYNCRIP-201ENST00000355238 STPG1Q5TH74 334 aa10.42□□□□□ -0.74
SYNCRIP-201ENST00000355238 TRGV2A0A075B6R0 118 aa10.42□□□□□ -0.74
SYNCRIP-201ENST00000355238 TRAV3A0A0B4J244 114 aa10.42□□□□□ -0.74
SYNCRIP-201ENST00000355238 TRAV40A0A0B4J280 105 aa10.42□□□□□ -0.74
SYNCRIP-201ENST00000355238 SRRM5B3KS81 715 aa10.42□□□□□ -0.74
SYNCRIP-201ENST00000355238 FAM27E3Q08E93 113 aa10.42□□□□□ -0.74
SYNCRIP-201ENST00000355238 LGALS9BQ3B8N2 356 aa10.42□□□□□ -0.74
SYNCRIP-201ENST00000355238 LGALS9CQ6DKI2 356 aa10.42□□□□□ -0.74
SYNCRIP-201ENST00000355238 SHANK3Q9BYB0 1731 aa10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 MYMXA0A1B0GTQ4 84 aa10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 ADARB2-AS1A8MUL3 147 aa10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 INAFM2P0DMQ5 153 aa10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 COL5A3P25940 1745 aaPredicted RBP10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 GAGE2AQ6NT46 116 aa10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 E9PQ18 207 aa10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 TFF1P04155 84 aa10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 A0A0G2JMZ2 1700 aa10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 LRRC37A2A6NM11 1700 aa10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 LRRC37AA6NMS7 1700 aa10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 SIVA1O15304 175 aa10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 PSPNO60542 156 aa10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 NPC2P61916 151 aa10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 BSPH1Q075Z2 132 aa10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 TAL2Q16559 108 aa10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 RNF5Q99942 180 aa10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 NYNRINQ9P2P1 1898 aaKnown RBP10.41□□□□□ -0.74
SYNCRIP-201ENST00000355238 KIR2DL5BA0A0G2JN68 375 aa10.4□□□□□ -0.74
SYNCRIP-201ENST00000355238 KIR2DL5BA0A0G2JPC4 375 aa10.4□□□□□ -0.74
SYNCRIP-201ENST00000355238 KIR2DL5AQ8N109 375 aa10.4□□□□□ -0.74
SYNCRIP-201ENST00000355238 CSTL1Q9H114 145 aa10.4□□□□□ -0.74
SYNCRIP-201ENST00000355238 LINC00473A8K010 186 aa10.4□□□□□ -0.74
SYNCRIP-201ENST00000355238 C10orf55Q5SWW7 151 aa10.4□□□□□ -0.74
SYNCRIP-201ENST00000355238 FAM231DQ6ZW35 169 aa10.4□□□□□ -0.74
SYNCRIP-201ENST00000355238 RNF144BQ7Z419 303 aa10.4□□□□□ -0.74
SYNCRIP-201ENST00000355238 IGLV3-19P01714 112 aa10.4□□□□□ -0.74
SYNCRIP-201ENST00000355238 GREB1LQ9C091 1923 aaPredicted RBP10.4□□□□□ -0.75
SYNCRIP-201ENST00000355238 LEPROTO15243 131 aa10.4□□□□□ -0.75
SYNCRIP-201ENST00000355238 EFNA2O43921 213 aa10.4□□□□□ -0.75
SYNCRIP-201ENST00000355238 Q6P435 159 aa10.4□□□□□ -0.75
SYNCRIP-201ENST00000355238 PEMTQ9UBM1 199 aa10.4□□□□□ -0.75
SYNCRIP-201ENST00000355238 ARMS2P0C7Q2 107 aa10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 PAX8Q06710 450 aa10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 V9GYV3 84 aa10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 UBR3Q6ZT12 1888 aa10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 SMKR1H3BMG3 65 aa10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 VDAC2P45880 294 aaPredicted RBP10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 ZNF876PQ49A33 203 aa10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 TIMM21Q9BVV7 248 aa10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 SMIM27A0A1W2PRY6 76 aa10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 SELLP14151 372 aa10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 LINC00477Q96M19 166 aa10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 CACNA1DQ01668 2161 aa10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 FAM186AA6NE01 2351 aa10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 IGHV3OR16-10A0A075B7F0 116 aa10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 VWC2LB2RUY7 222 aa10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 ATP1A1-AS1Q5TC04 95 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms