RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 ZFAND3Q9H8U3 227 aa13.39□□□□□ -0.27
VPS13B-201ENST00000355155 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.38□□□□□ -0.272e-8■■■■■ 36
VPS13B-201ENST00000355155 MYO18BQ8IUG5 2567 aa13.38□□□□□ -0.27
VPS13B-201ENST00000355155 EPG5Q9HCE0 2579 aa13.38□□□□□ -0.27
VPS13B-201ENST00000355155 S100A9P06702 114 aaKnown RBP13.38□□□□□ -0.27
VPS13B-201ENST00000355155 NBEAP1P0C6P0 100 aa13.38□□□□□ -0.27
VPS13B-201ENST00000355155 ZNF674Q2M3X9 581 aa13.38□□□□□ -0.27
VPS13B-201ENST00000355155 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.38□□□□□ -0.27
VPS13B-201ENST00000355155 DERL1Q9BUN8 251 aa13.38□□□□□ -0.27
VPS13B-201ENST00000355155 TRBV24-1A0A075B6N3 115 aa13.38□□□□□ -0.27
VPS13B-201ENST00000355155 USF2Q15853 346 aaPredicted RBP13.38□□□□□ -0.27
VPS13B-201ENST00000355155 CDC42EP3Q9UKI2 254 aa13.38□□□□□ -0.27
VPS13B-201ENST00000355155 AP4M1O00189 453 aa13.37□□□□□ -0.27
VPS13B-201ENST00000355155 PDE6HQ13956 83 aa13.37□□□□□ -0.27
VPS13B-201ENST00000355155 KIAA0141Q14154 515 aaPredicted RBP13.37□□□□□ -0.27
VPS13B-201ENST00000355155 LOC105371267A0A1B0GV96 52 aa13.37□□□□□ -0.27
VPS13B-201ENST00000355155 IL4P05112 153 aa13.37□□□□□ -0.27
VPS13B-201ENST00000355155 PFN1P07737 140 aaKnown RBP13.37□□□□□ -0.27
VPS13B-201ENST00000355155 RPL35P42766 123 aaKnown RBP13.37□□□□□ -0.27
VPS13B-201ENST00000355155 ADIRFQ15847 76 aa13.37□□□□□ -0.27
VPS13B-201ENST00000355155 OTORQ9NRC9 128 aa13.37□□□□□ -0.27
VPS13B-201ENST00000355155 TMA7Q9Y2S6 64 aaKnown RBP13.37□□□□□ -0.27
VPS13B-201ENST00000355155 ZNF253O75346 499 aa13.36□□□□□ -0.27
VPS13B-201ENST00000355155 SUMO1P63165 101 aaKnown RBP13.36□□□□□ -0.27
VPS13B-201ENST00000355155 BPIFA4PQ86YQ2 179 aa13.36□□□□□ -0.27
VPS13B-201ENST00000355155 BCL6BQ8N143 479 aaPredicted RBP13.36□□□□□ -0.27
VPS13B-201ENST00000355155 CHRDL1Q9BU40 450 aa13.36□□□□□ -0.27
VPS13B-201ENST00000355155 CRYBB3P26998 211 aa13.36□□□□□ -0.27
VPS13B-201ENST00000355155 SRP14P37108 136 aaKnown RBP13.36□□□□□ -0.27
VPS13B-201ENST00000355155 RAB9AP51151 201 aa13.36□□□□□ -0.27
VPS13B-201ENST00000355155 FAM209BQ5JX69 171 aa13.36□□□□□ -0.27
VPS13B-201ENST00000355155 ZNF586Q9NXT0 402 aa13.36□□□□□ -0.27
VPS13B-201ENST00000355155 HELTA6NFD8 242 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 ZNF98A6NK75 572 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 TGOLN2O43493 480 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 RAB5AP20339 215 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 ATP5G2Q06055 141 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 U3KQE9 123 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 SH2D7A6NKC9 451 aaPredicted RBP13.35□□□□□ -0.27
VPS13B-201ENST00000355155 PEX7O00628 323 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 IGLV2-8P01709 118 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 TMEM183BQ1AE95 376 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 VPS13CQ709C8 3753 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 TMEM86BQ8N661 226 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 C5orf17Q8NAS9 161 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 VPREB3Q9UKI3 123 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 EPDR1Q9UM22 224 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 TACC2O95359 2948 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 WNK2Q9Y3S1 2297 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 TRBV19A0A075B6N1 114 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 GCGP01275 180 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 FLI1Q01543 452 aaPredicted RBP13.35□□□□□ -0.27
VPS13B-201ENST00000355155 OCC1Q8TAD7 63 aa13.35□□□□□ -0.27
VPS13B-201ENST00000355155 A0A087X0K7 114 aa13.34□□□□□ -0.27
VPS13B-201ENST00000355155 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.34□□□□□ -0.27
VPS13B-201ENST00000355155 MDFIC2A0A1B0GVS7 189 aa13.34□□□□□ -0.27
VPS13B-201ENST00000355155 OR2T8A6NH00 312 aa13.34□□□□□ -0.27
VPS13B-201ENST00000355155 CRYBA1P05813 215 aa13.34□□□□□ -0.27
VPS13B-201ENST00000355155 LY6EQ16553 131 aa13.34□□□□□ -0.27
VPS13B-201ENST00000355155 Q8N2B8 174 aa13.34□□□□□ -0.27
VPS13B-201ENST00000355155 AKAP6Q13023 2319 aa13.34□□□□□ -0.27
VPS13B-201ENST00000355155 BMPR1BO00238 502 aa13.34□□□□□ -0.27
VPS13B-201ENST00000355155 IGHV4-59P01825 116 aa13.34□□□□□ -0.27
VPS13B-201ENST00000355155 RELQ04864 619 aaPredicted RBP13.33□□□□□ -0.28
VPS13B-201ENST00000355155 C1orf194Q5T5A4 169 aa13.33□□□□□ -0.28
VPS13B-201ENST00000355155 FAM24BQ8N5W8 94 aa13.33□□□□□ -0.28
VPS13B-201ENST00000355155 MAPK1IP1LQ8NDC0 245 aa13.33□□□□□ -0.28
VPS13B-201ENST00000355155 GPR82Q96P67 336 aa13.33□□□□□ -0.28
VPS13B-201ENST00000355155 RABAC1Q9UI14 185 aa13.33□□□□□ -0.28
VPS13B-201ENST00000355155 TRAV9-1A0A075B6T8 112 aa13.33□□□□□ -0.28
VPS13B-201ENST00000355155 K7EN84 100 aa13.33□□□□□ -0.28
VPS13B-201ENST00000355155 GGCTO75223 188 aaKnown RBP13.33□□□□□ -0.28
VPS13B-201ENST00000355155 TEX38Q6PEX7 206 aa13.33□□□□□ -0.28
VPS13B-201ENST00000355155 SFRP2Q96HF1 295 aa13.33□□□□□ -0.28
VPS13B-201ENST00000355155 ATG101Q9BSB4 218 aa13.33□□□□□ -0.28
VPS13B-201ENST00000355155 BLCAPP62952 87 aa13.32□□□□□ -0.28
VPS13B-201ENST00000355155 FOXL1Q12952 345 aa13.32□□□□□ -0.28
VPS13B-201ENST00000355155 TOMM20LQ6UXN7 152 aa13.32□□□□□ -0.28
VPS13B-201ENST00000355155 OR4F17Q8NGA8 305 aa13.32□□□□□ -0.28
VPS13B-201ENST00000355155 Q9H3A6 140 aa13.32□□□□□ -0.28
VPS13B-201ENST00000355155 CLPSL1A2RUU4 121 aa13.32□□□□□ -0.28
VPS13B-201ENST00000355155 H7BYZ3 331 aa13.32□□□□□ -0.28
VPS13B-201ENST00000355155 IGHG4P01861 327 aa13.32□□□□□ -0.28
VPS13B-201ENST00000355155 CLEC3BP05452 202 aa13.32□□□□□ -0.28
VPS13B-201ENST00000355155 CENPWQ5EE01 88 aa13.32□□□□□ -0.28
VPS13B-201ENST00000355155 FAM231DQ6ZW35 169 aa13.32□□□□□ -0.28
VPS13B-201ENST00000355155 BTF3L4Q96K17 158 aa13.32□□□□□ -0.28
VPS13B-201ENST00000355155 OSTCQ9NRP0 149 aa13.32□□□□□ -0.28
VPS13B-201ENST00000355155 UTP20O75691 2785 aaKnown RBP13.32□□□□□ -0.28
VPS13B-201ENST00000355155 TYMSP04818 313 aa13.31□□□□□ -0.28
VPS13B-201ENST00000355155 SIGLEC15Q6ZMC9 328 aa13.31□□□□□ -0.28
VPS13B-201ENST00000355155 S4R3C0 116 aa13.31□□□□□ -0.28
VPS13B-201ENST00000355155 CXCL1P09341 107 aa13.31□□□□□ -0.28
VPS13B-201ENST00000355155 RPL7P18124 248 aaKnown RBP13.31□□□□□ -0.28
VPS13B-201ENST00000355155 GPR183P32249 361 aa13.31□□□□□ -0.28
VPS13B-201ENST00000355155 GNG4P50150 75 aa13.31□□□□□ -0.28
VPS13B-201ENST00000355155 CNN1P51911 297 aaKnown RBP13.31□□□□□ -0.28
VPS13B-201ENST00000355155 KRTAP1-1Q07627 177 aa13.31□□□□□ -0.28
VPS13B-201ENST00000355155 FMC1Q96HJ9 113 aa13.31□□□□□ -0.28
VPS13B-201ENST00000355155 RNF152Q8N8N0 203 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms