RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 FAM90A13PP0C7W8 464 aa8.25□□□□□ -1.09
COL11A1-201ENST00000353414 FAM90A14PP0C7W9 464 aa8.25□□□□□ -1.09
COL11A1-201ENST00000353414 FAM90A24PP0C7X0 464 aa8.25□□□□□ -1.09
COL11A1-201ENST00000353414 SPATA31B1PQ5VZV4 182 aa8.25□□□□□ -1.09
COL11A1-201ENST00000353414 SPSB3Q6PJ21 355 aa8.25□□□□□ -1.09
COL11A1-201ENST00000353414 PAQR4Q8N4S7 273 aaPredicted RBP8.25□□□□□ -1.09
COL11A1-201ENST00000353414 SPXQ9BT56 116 aa8.25□□□□□ -1.09
COL11A1-201ENST00000353414 RBM38Q9H0Z9 239 aaKnown RBP8.25□□□□□ -1.09
COL11A1-201ENST00000353414 ZNF407Q9C0G0 2248 aa8.24□□□□□ -1.09
COL11A1-201ENST00000353414 LTBP1Q14766 1721 aa8.24□□□□□ -1.09
COL11A1-201ENST00000353414 TRBV9A0A0B4J1U6 114 aa8.24□□□□□ -1.09
COL11A1-201ENST00000353414 DPM2O94777 84 aa8.24□□□□□ -1.09
COL11A1-201ENST00000353414 SAMD5Q5TGI4 173 aa8.24□□□□□ -1.09
COL11A1-201ENST00000353414 RTBDNQ9BSG5 229 aaPredicted RBP8.24□□□□□ -1.09
COL11A1-201ENST00000353414 A8MXK9 166 aa8.24□□□□□ -1.09
COL11A1-201ENST00000353414 J3QKU1 62 aa8.24□□□□□ -1.09
COL11A1-201ENST00000353414 ITGB1BP1O14713 200 aa8.24□□□□□ -1.09
COL11A1-201ENST00000353414 DLX4Q92988 240 aaPredicted RBP8.24□□□□□ -1.09
COL11A1-201ENST00000353414 FAM186AA6NE01 2351 aa8.24□□□□□ -1.09
COL11A1-201ENST00000353414 IGKCP01834 107 aa8.24□□□□□ -1.09
COL11A1-201ENST00000353414 C14orf178Q8N769 122 aaPredicted RBP8.24□□□□□ -1.09
COL11A1-201ENST00000353414 C1QTNF5Q9BXJ0 243 aa8.24□□□□□ -1.09
COL11A1-201ENST00000353414 CSRP1P21291 193 aaKnown RBP8.23□□□□□ -1.09
COL11A1-201ENST00000353414 PFN2P35080 140 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 SERF1AO75920 110 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 DAD1P61803 113 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 LINC01590Q5TEZ4 76 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 GAGE2AQ6NT46 116 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 THAP8Q8NA92 274 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 C5orf30Q96GV9 206 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 ZNF319Q9P2F9 582 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 TRAV3A0A0B4J244 114 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 A8MWV9 139 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 VWC2LB2RUY7 222 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 TSC2P49815 1807 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 COL4A1P02462 1669 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 TRAV8-3A0A0A6YYJ7 113 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 PQLC2LA1A4F0 135 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 GAGE12JA6NER3 117 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 TMEM14DPA8MWL7 114 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 CD59P13987 128 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 DEFB131AP59861 70 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 GAGE1Q13065 139 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 GAGE4Q13068 117 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 GAGE5Q13069 117 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 GAGE13Q4V321 117 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 C1orf100Q5SVJ3 147 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 TMEM126AQ9H061 195 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 Q9HAA7 133 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 CACNA1BQ00975 2339 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 C15orf61A6NNL5 157 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 ESDP10768 282 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 E9PLN8 166 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 MRPL52Q86TS9 123 aaKnown RBP8.23□□□□□ -1.09
COL11A1-201ENST00000353414 LINC01356Q8N9X3 169 aa8.23□□□□□ -1.09
COL11A1-201ENST00000353414 TRAV12-2A0A075B6T6 113 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 PAX9P55771 341 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 ZNF497Q6ZNH5 498 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 IGFBPL1Q8WX77 278 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 VSIRQ9H7M9 311 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 TICRRQ7Z2Z1 1910 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 ATXN8Q156A1 80 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 CSTL1Q9H114 145 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 ZNF561-AS1K7EIQ3 104 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 PLNP26678 52 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 GAGE2BQ13066 116 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 LAMTOR2Q9Y2Q5 125 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 LINC00587B1AMM8 73 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 SRSF3P84103 164 aaKnown RBP8.22□□□□□ -1.09
COL11A1-201ENST00000353414 RFNGQ9Y644 331 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 WNK2Q9Y3S1 2297 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 IGHV4-4A0A075B6R2 117 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 IGHV1-3A0A0C4DH29 117 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 D6R8Y8 96 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 TMEM30BQ3MIR4 351 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 MS4A6AQ9H2W1 248 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 SPTBN2O15020 2390 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 GAGE12BA1L429 117 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 GREM1O60565 184 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 GAGE7O76087 117 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 GAGE12FP0CL80 117 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 GAGE12GP0CL81 117 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 GAGE12IP0CL82 117 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 WBP1Q96G27 269 aa8.22□□□□□ -1.09
COL11A1-201ENST00000353414 NXPH4O95158 308 aa8.21□□□□□ -1.09
COL11A1-201ENST00000353414 EFNA4P52798 201 aa8.21□□□□□ -1.09
COL11A1-201ENST00000353414 RPL36AP83881 106 aaKnown RBP8.21□□□□□ -1.09
COL11A1-201ENST00000353414 LAGE3Q14657 143 aa8.21□□□□□ -1.09
COL11A1-201ENST00000353414 SPINK13Q1W4C9 94 aa8.21□□□□□ -1.09
COL11A1-201ENST00000353414 RPL36ALQ969Q0 106 aaKnown RBP8.21□□□□□ -1.09
COL11A1-201ENST00000353414 B4DSR2 109 aa8.21□□□□□ -1.09
COL11A1-201ENST00000353414 BMPERQ8N8U9 685 aa8.21□□□□□ -1.09
COL11A1-201ENST00000353414 MDS2Q8NDY4 140 aa8.21□□□□□ -1.09
COL11A1-201ENST00000353414 NRN1Q9NPD7 142 aa8.21□□□□□ -1.09
COL11A1-201ENST00000353414 PSG1P11464 419 aa8.21□□□□□ -1.1
COL11A1-201ENST00000353414 CTHRC1Q96CG8 243 aa8.21□□□□□ -1.1
COL11A1-201ENST00000353414 ERG28Q9UKR5 140 aa8.21□□□□□ -1.1
COL11A1-201ENST00000353414 A0A0J9YY99 117 aa8.21□□□□□ -1.1
COL11A1-201ENST00000353414 SAA4P35542 130 aa8.21□□□□□ -1.1
COL11A1-201ENST00000353414 DSCR9P59020 149 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms